Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv17422 Davidia involucrata HOM05D003426 ORTHO05D003816 3.3e-116 421.8 219 100.0
TAR626G1511 Trochodendron aralioides HOM05D003426 ORTHO05D003816 6.8e-21 105.1 241 34.0
TAR636G1172 Trochodendron aralioides HOM05D003426 ORTHO05D003816 8.3e-19 98.2 231 32.9
MD15G1151400 Malus domestica HOM05D003426 ORTHO05D003816 5.4e-18 95.5 207 36.2
Dinv43256 Davidia involucrata HOM05D003426 ORTHO05D003816 2.2e-16 90.1 253 33.2
MSTRG.26266 Avicennia marina HOM05D003426 ORTHO05D003816 5.0e-16 89.0 209 35.9
Hma1.2p1_0028F.1_g017630 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 5.0e-16 89.0 238 34.0
Oeu026460.1 Olea europaea HOM05D003426 ORTHO05D003816 8.5e-16 88.2 212 34.0
Lj9C718T11 Lonicera japonica HOM05D003426 ORTHO05D003816 1.9e-15 87.0 262 29.8
Cc06_g14810 Coffea canephora HOM05D003426 ORTHO05D003816 2.5e-15 86.7 222 33.3
TWI34G0373 Tripterygium wilfordii HOM05D003426 ORTHO05D003816 4.2e-15 85.9 208 35.1
Cpa.g.sc46.169 Carica papaya HOM05D003426 ORTHO05D003816 5.5e-15 85.5 201 36.8
CAN.G160.49 Capsicum annuum HOM05D003426 ORTHO05D003816 9.5e-15 84.7 283 32.2
COL.COLO4_18823 Corchorus olitorius HOM05D003426 ORTHO05D003816 2.1e-14 83.6 172 34.9
Potri.006G182601 Populus trichocarpa HOM05D003426 ORTHO05D003816 2.8e-14 83.2 188 37.2
Aqoxy7G03377 Aquilegia oxysepala HOM05D003426 ORTHO05D003816 3.6e-14 82.8 194 35.6
Dinv42844 Davidia involucrata HOM05D003426 ORTHO05D003816 4.7e-14 82.4 109 45.9
MD02G1006400 Malus domestica HOM05D003426 ORTHO05D003816 8.0e-14 81.6 201 32.8
Nn2g12424 Nelumbo nucifera HOM05D003426 ORTHO05D003816 1.0e-13 81.3 255 29.4
MSTRG.6152 Avicennia marina HOM05D003426 ORTHO05D003816 3.0e-13 79.7 208 33.7
Cfa020810 Carpinus fangiana HOM05D003426 ORTHO05D003816 4.0e-13 79.3 233 32.2
EL10Ac8g18943 Beta vulgaris HOM05D003426 ORTHO05D003816 5.2e-13 79.0 215 31.6
Lj4g0000658 Lotus japonicus HOM05D003426 ORTHO05D003816 5.2e-13 79.0 197 33.0
AUR62025323 Chenopodium quinoa HOM05D003426 ORTHO05D003816 8.8e-13 78.2 213 31.9
Thecc.09G028500 Theobroma cacao HOM05D003426 ORTHO05D003816 1.2e-12 77.8 215 31.6
AUR62028339 Chenopodium quinoa HOM05D003426 ORTHO05D003816 2.0e-12 77.0 218 31.7
Peaxi162Scf00401g00417 Petunia axillaris HOM05D003426 ORTHO05D003816 2.6e-12 76.6 237 30.4
CDE05G1528 Ceratophyllum demersum HOM05D051348 ORTHO05D003816 3.4e-12 76.3 178 33.7
HanXRQChr05g0144001 Helianthus annuus HOM05D003426 ORTHO05D003816 3.4e-12 76.3 194 33.0
CiPaw.15G166800 Carya illinoinensis HOM05D003426 ORTHO05D003816 5.7e-12 75.5 219 32.4
Eucgr.C00251 Eucalyptus grandis HOM05D003426 ORTHO05D003816 7.5e-12 75.1 202 33.7
CDE02G2039 Ceratophyllum demersum HOM05D051348 ORTHO05D003816 1.3e-11 74.3 178 33.1
Ca_21135_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 1.7e-11 73.9 180 33.3
Ca_21137_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 1.7e-11 73.9 180 33.3
Duzib168G0934 Durio zibethinus HOM05D003426 ORTHO05D003816 2.2e-11 73.6 203 32.5
PSO210G2240 Papaver somniferum HOM05D003426 ORTHO05D003816 2.2e-11 73.6 200 33.0
Manes.14G144800 Manihot esculenta HOM05D003426 ORTHO05D003816 2.8e-11 73.2 198 32.3
Rhsim02G0212600 Rhododendron simsii HOM05D003426 ORTHO05D003816 2.8e-11 73.2 205 32.7
Actinidia23556 Actinidia chinensis HOM05D003426 ORTHO05D003816 3.7e-11 72.8 239 31.8
PSO210G1729 Papaver somniferum HOM05D003426 ORTHO05D003816 3.7e-11 72.8 199 31.7
Nn8g39953 Nelumbo nucifera HOM05D003426 ORTHO05D003816 4.9e-11 72.4 262 27.5
vmacro16795 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 4.9e-11 72.4 204 35.8
SGA_v2.0_scaffold265G46098 Striga asiatica HOM05D003426 ORTHO05D003816 8.3e-11 71.6 157 34.4
Prupe.7G264500 Prunus persica HOM05D003426 ORTHO05D003816 1.4e-10 70.9 167 33.5
Lsat_1_v5_gn_5_90301 Lactuca sativa HOM05D003426 ORTHO05D003816 2.4e-10 70.1 251 28.3
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 4.1e-10 69.3 240 30.8
PSO111G0039 Papaver somniferum HOM05D003426 ORTHO05D003816 7.0e-10 68.6 226 31.4
PSO561G0041 Papaver somniferum HOM05D003426 ORTHO05D003816 1.2e-09 67.8 226 32.7
Lsat_1_v5_gn_5_90221 Lactuca sativa HOM05D029854 ORTHO05D003816 2.0e-09 67.0 195 29.2
TAR625G0621 Trochodendron aralioides HOM05D003426 ORTHO05D003816 2.0e-09 67.0 220 31.4
Sopen07g001810 Solanum pennellii HOM05D003426 ORTHO05D003816 2.7e-09 66.6 249 28.1
Glyma.17G072900 Glycine max HOM05D003426 ORTHO05D003816 4.5e-09 65.9 205 30.7
Oeu021305.2 Olea europaea HOM05D003426 ORTHO05D003816 4.5e-09 65.9 193 31.6
Psat4g009920 Pisum sativum HOM05D003426 ORTHO05D003816 4.5e-09 65.9 224 28.6
Gohir.A07G027500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 7.8e-09 65.1 185 31.4
PGSC0003DMG400011187 Solanum tuberosum HOM05D003426 ORTHO05D003816 7.8e-09 65.1 243 29.6
Solyc07g005700.3 Solanum lycopersicum HOM05D003426 ORTHO05D003816 1.0e-08 64.7 238 28.2
MBI14_g30955_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 1.3e-08 64.3 187 32.6
Hund08921 Selenicereus undatus HOM05D003426 ORTHO05D003816 1.3e-08 64.3 266 26.7
Gorai.001G032900 Gossypium raimondii HOM05D003426 ORTHO05D003816 2.3e-08 63.5 185 31.9
MD17G1259500 Malus domestica HOM05D003426 ORTHO05D003816 2.3e-08 63.5 218 28.4
Atru.chr7.23 Acer truncatum HOM05D003426 ORTHO05D003816 3.8e-08 62.8 258 30.2
Glyma.17G072800 Glycine max HOM05D003426 ORTHO05D003816 3.8e-08 62.8 187 31.0
Rhsim01G0028100 Rhododendron simsii HOM05D003426 ORTHO05D003816 3.8e-08 62.8 199 33.7
Lsat_1_v5_gn_5_89740 Lactuca sativa HOM05D003426 ORTHO05D003816 5.0e-08 62.4 160 35.0
Gohir.D07G031500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 6.6e-08 62.0 185 31.4
PSO675G7028 Papaver somniferum HOM05D003426 ORTHO05D003816 8.6e-08 61.6 159 32.1
PGSC0003DMG400036381 Solanum tuberosum HOM05D003426 ORTHO05D003816 8.6e-08 61.6 171 32.2
Manes.06G035400 Manihot esculenta HOM05D003426 ORTHO05D003816 1.1e-07 61.2 233 29.2
Actinidia10526 Actinidia chinensis HOM05D003426 ORTHO05D003816 1.5e-07 60.8 205 28.8
Medtr3g045840 Medicago truncatula HOM05D003426 ORTHO05D003816 1.9e-07 60.5 167 30.5
Medtr4g130690 Medicago truncatula HOM05D003426 ORTHO05D003816 2.5e-07 60.1 178 32.0
CiPaw.16G108300 Carya illinoinensis HOM05D003426 ORTHO05D003816 4.3e-07 59.3 88 42.0
Nitab4.5_0001571g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 4.3e-07 59.3 97 41.2
DCAR_019401 Daucus carota HOM05D003426 ORTHO05D003816 5.6e-07 58.9 106 41.5
Actinidia38667 Actinidia chinensis HOM05D003426 ORTHO05D003816 7.3e-07 58.5 233 29.2
GSVIVG01016047001 Vitis vinifera HOM05D003426 ORTHO05D003816 7.3e-07 58.5 71 49.3
PGR142G3879 Punica granatum HOM05D003426 ORTHO05D003816 9.5e-07 58.2 203 30.5
Os06g0651300 Oryza sativa ssp. japonica HOM05D003426 ORTHO05D003816 1.2e-06 57.8 41 63.4
EL10Ac2g02492 Beta vulgaris HOM05D016866 ORTHO05D003816 2.1e-06 57.0 202 29.2
MBI15_g18232_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 2.1e-06 57.0 176 33.5
Rhsim03G0257700 Rhododendron simsii HOM05D003426 ORTHO05D003816 2.8e-06 56.6 228 29.8
CANSAT11G1136 Cannabis sativa HOM05D003426 ORTHO05D003816 3.6e-06 56.2 191 30.4
Glyma.17G073000 Glycine max HOM05D003426 ORTHO05D003816 3.6e-06 56.2 200 29.5
ClCG06G012490 Citrullus lanatus HOM05D003426 ORTHO05D003816 4.7e-06 55.8 249 27.3
ECA236G2514 Erigeron canadensis HOM05D003426 ORTHO05D003816 4.7e-06 55.8 267 25.8
Medtr4g129690 Medicago truncatula HOM05D003426 ORTHO05D003816 6.1e-06 55.5 169 29.6


User provided reference genes

Program Settings