Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv17369 Davidia involucrata HOM05D007416 ORTHO05D009329 4.5e-68 261.2 133 100.0
Nitab4.5_0002114g0110 Nicotiana tabacum HOM05D007416 ORTHO05D009329 8.2e-38 160.6 118 69.5
Nitab4.5_0014582g0020 Nicotiana tabacum HOM05D007416 ORTHO05D009329 1.1e-37 160.2 118 69.5
PGSC0003DMG400022819 Solanum tuberosum HOM05D007416 ORTHO05D009329 1.8e-37 159.5 119 66.4
Manes.17G051100 Manihot esculenta HOM05D007416 ORTHO05D009329 1.7e-35 152.9 115 66.1
Solyc10g008850.2 Solanum lycopersicum HOM05D007416 ORTHO05D009329 5.5e-34 147.9 119 63.0
Sopen10g004640 Solanum pennellii HOM05D007416 ORTHO05D009329 5.5e-34 147.9 119 63.0
COL.COLO4_31395 Corchorus olitorius HOM05D007416 ORTHO05D009329 1.8e-32 142.9 112 65.2
Hma1.2p1_1465F.1_g285370 Hydrangea macrophylla HOM05D007416 ORTHO05D009329 3.0e-32 142.1 95 71.6
Peaxi162Scf00248g00011 Petunia axillaris HOM05D007416 ORTHO05D009329 4.0e-32 141.7 96 74.0
Potri.004G051300 Populus trichocarpa HOM05D007416 ORTHO05D009329 5.2e-32 141.4 117 62.4
Thecc.06G178300 Theobroma cacao HOM05D007416 ORTHO05D009329 6.8e-32 141.0 106 65.1
Cc02_g14200 Coffea canephora HOM05D007416 ORTHO05D009329 2.0e-31 139.4 85 74.1
CiPaw.10G054100 Carya illinoinensis HOM05D007416 ORTHO05D009329 5.7e-31 137.9 125 54.4
TWI38G0960 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 7.5e-31 137.5 118 61.9
CANSAT35G0095 Cannabis sativa HOM05D007416 ORTHO05D009329 9.7e-31 137.1 96 66.7
CAN.G361.15 Capsicum annuum HOM05D007416 ORTHO05D009329 9.7e-31 137.1 123 57.7
Haze_06330 Corylus avellana HOM05D007416 ORTHO05D009329 2.2e-30 136.0 113 66.4
CSS0002821 Camellia sinensis var. sinensis HOM05D007416 ORTHO05D009329 4.8e-30 134.8 90 71.1
SGA_v2.0_scaffold16G07657 Striga asiatica HOM05D007416 ORTHO05D009329 4.8e-30 134.8 89 68.5
Lsat_1_v5_gn_1_119080 Lactuca sativa HOM05D007416 ORTHO05D009329 6.3e-30 134.4 94 68.1
TWI63G0778 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 1.1e-29 133.7 118 60.2
Prupe.4G055000 Prunus persica HOM05D007416 ORTHO05D009329 2.4e-29 132.5 111 62.2
Ciclev10017211m.g Citrus clementina HOM05D007416 ORTHO05D009329 3.1e-29 132.1 126 56.3
SGA_v2.0_scaffold309G48156 Striga asiatica HOM05D007416 ORTHO05D009329 3.1e-29 132.1 88 69.3
TAR627G0809 Trochodendron aralioides HOM05D003433 ORTHO05D003921 9.1e-29 130.6 82 75.6
unitig_8.g4657 Utricularia gibba HOM05D004204 ORTHO05D005069 9.1e-29 130.6 93 66.7
Cfa000548 Carpinus fangiana HOM05D007416 ORTHO05D009329 2.0e-28 129.4 113 62.8
CsaV3_6G050530 Cucumis sativus L. HOM05D007416 ORTHO05D009329 3.5e-28 128.6 97 63.9
Migut.M01088 Erythranthe guttata HOM05D007416 ORTHO05D009329 3.5e-28 128.6 128 53.9
Oeu012170.1 Olea europaea HOM05D007416 ORTHO05D009329 3.5e-28 128.6 78 76.9
MELO3C007245.2 Cucumis melo HOM05D007416 ORTHO05D009329 4.5e-28 128.3 118 56.8
ECA234G4626 Erigeron canadensis HOM05D007416 ORTHO05D009329 1.0e-27 127.1 81 70.4
Gohir.A02G025200 Gossypium hirsutum HOM05D007416 ORTHO05D009329 1.0e-27 127.1 71 77.5
Gohir.D02G032400 Gossypium hirsutum HOM05D007416 ORTHO05D009329 1.0e-27 127.1 64 81.2
Gorai.005G035900 Gossypium raimondii HOM05D007416 ORTHO05D009329 1.0e-27 127.1 64 81.2
Atru.chr10.1755 Acer truncatum HOM05D007416 ORTHO05D009329 1.3e-27 126.7 69 84.1
Aqoxy1G02242 Aquilegia oxysepala HOM05D007416 ORTHO05D009329 1.3e-27 126.7 115 56.5
unitig_8.g4633 Utricularia gibba HOM05D007416 ORTHO05D009329 1.3e-27 126.7 93 65.6
unitig_8.g4637 Utricularia gibba HOM05D007416 ORTHO05D009329 1.3e-27 126.7 93 65.6
Nn1g06362 Nelumbo nucifera HOM05D007416 ORTHO05D009329 2.9e-27 125.6 110 60.9
PSO675G1239 Papaver somniferum HOM05D007416 ORTHO05D009329 3.8e-27 125.2 120 55.8
QL05p043606 Quercus lobata HOM05D007416 ORTHO05D009329 3.8e-27 125.2 114 58.8
Actinidia07614 Actinidia chinensis HOM05D007416 ORTHO05D009329 6.5e-27 124.4 114 63.2
ClCG01G023400 Citrullus lanatus HOM05D007416 ORTHO05D009329 8.5e-27 124.0 112 57.1
Eucgr.D00578 Eucalyptus grandis HOM05D007416 ORTHO05D009329 8.5e-27 124.0 87 67.8
HanXRQChr14g0454031 Helianthus annuus HOM05D007416 ORTHO05D009329 1.1e-26 123.6 78 67.9
Cpa.g.sc7.10 Carica papaya HOM05D007416 ORTHO05D009329 1.5e-26 123.2 103 67.0
Sed0002237 Sechium edule HOM05D007416 ORTHO05D009329 2.5e-26 122.5 96 60.4
THA.LOC104812624 Tarenaya hassleriana HOM05D007416 ORTHO05D009329 3.2e-26 122.1 75 76.0
SalBow8G2036 Salvia bowleyana HOM05D007416 ORTHO05D009329 7.2e-26 120.9 79 69.6
FAN21G3844 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.2e-25 120.2 102 59.8
CDE05G1837 Ceratophyllum demersum HOM05D007416 ORTHO05D009329 3.6e-25 118.6 69 73.9
FAN25G0684 Fragaria x ananassa HOM05D007416 ORTHO05D009329 4.7e-25 118.2 79 69.6
FAN16G3750 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.0e-24 117.1 86 62.8
Sc17g0005840 Simmondsia chinensis HOM05D007416 ORTHO05D009329 1.0e-24 117.1 106 58.5
A08p25450 Brassica napus HOM05D007416 ORTHO05D009329 1.8e-24 116.3 82 68.3
HPP92_005210 Vanilla planifolia HOM05D007416 ORTHO05D009329 1.8e-24 116.3 60 80.0
BcaC01g00068 Brassica carinata HOM05D007416 ORTHO05D009329 2.3e-24 115.9 82 68.3
AUR62031108 Chenopodium quinoa HOM05D007416 ORTHO05D009329 2.3e-24 115.9 123 52.0
FvH4_3g08330 Fragaria vesca HOM05D007416 ORTHO05D009329 2.3e-24 115.9 81 69.1
MD10G1286700 Malus domestica HOM05D007416 ORTHO05D009329 2.3e-24 115.9 66 78.8
arahy.Tifrunner.gnm1.ann1.46W2M6 Arachis hypogaea HOM05D007416 ORTHO05D009329 4.0e-24 115.2 81 63.0
RcHm_v2.0_Chr5g0009671 Rosa chinensis HOM05D007416 ORTHO05D009329 4.0e-24 115.2 79 68.4
C03p75360 Brassica napus HOM05D007416 ORTHO05D009329 5.2e-24 114.8 73 75.3
BolC3t19794H Brassica oleracea HOM05D007416 ORTHO05D009329 5.2e-24 114.8 75 73.3
AT1G28540 Arabidopsis thaliana HOM05D007416 ORTHO05D009329 8.8e-24 114.0 76 71.1
Os06g0524500 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 8.8e-24 114.0 69 72.5
Ah.09g237760 Amaranthus hybridus HOM05D007416 ORTHO05D009329 1.2e-23 113.6 59 83.1
Carub.0001s2700 Capsella rubella HOM05D007416 ORTHO05D009329 1.2e-23 113.6 75 72.0
C07p16790 Brassica napus HOM05D007416 ORTHO05D009329 1.5e-23 113.2 80 68.8
BraA08t34496Z Brassica rapa HOM05D007416 ORTHO05D009329 1.5e-23 113.2 73 74.0
TPR.G11747 Trifolium pratense HOM05D007416 ORTHO05D009329 1.5e-23 113.2 84 60.7
BcaB03g12097 Brassica carinata HOM05D007416 ORTHO05D009329 2.0e-23 112.8 80 68.8
Os06g0525000 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 2.0e-23 112.8 63 76.2
arahy.Tifrunner.gnm1.ann1.96U62E Arachis hypogaea HOM05D007416 ORTHO05D009329 2.6e-23 112.5 81 61.7
CARHR028020 Cardamine hirsuta HOM05D007416 ORTHO05D009329 3.4e-23 112.1 81 70.4
Lj6g0009243 Lotus japonicus HOM05D007416 ORTHO05D009329 3.4e-23 112.1 73 68.5
AL1G42170 Arabidopsis lyrata HOM05D007416 ORTHO05D009329 5.7e-23 111.3 69 75.4
BraA07t28904Z Brassica rapa HOM05D007416 ORTHO05D009329 5.7e-23 111.3 80 67.5
Sp1g24790 Schrenkiella parvula HOM05D007416 ORTHO05D009329 5.7e-23 111.3 80 68.8
Thhalv10009143m.g Eutrema salsugineum HOM05D007416 ORTHO05D009329 7.5e-23 110.9 81 69.1
Lalb_Chr20g0121431 Lupinus albus HOM05D007416 ORTHO05D009329 7.5e-23 110.9 76 68.4
AUR62014900 Chenopodium quinoa HOM05D007416 ORTHO05D009329 9.8e-23 110.5 123 50.4
Phvul.006G180100 Phaseolus vulgaris HOM05D007416 ORTHO05D009329 1.3e-22 110.2 94 58.5
TPR.G39540 Trifolium pratense HOM05D007416 ORTHO05D009329 1.3e-22 110.2 84 59.5
Ca_00403_v3 Cicer arietinum L. HOM05D007416 ORTHO05D009329 1.7e-22 109.8 102 54.9
PGR004G2353 Punica granatum HOM05D007416 ORTHO05D009329 1.7e-22 109.8 121 56.2
VMungo0540G0454 Vigna mungo HOM05D007416 ORTHO05D009329 3.7e-22 108.6 94 58.5
Rhsim02G0137800 Rhododendron simsii HOM05D007416 ORTHO05D009329 8.3e-22 107.5 122 46.7
Psat1g201280 Pisum sativum HOM05D007416 ORTHO05D009329 1.1e-21 107.1 93 55.9
HPP92_008637 Vanilla planifolia HOM05D007416 ORTHO05D009329 1.8e-21 106.3 77 63.6
Glyma.13G152576 Glycine max HOM05D007416 ORTHO05D009329 1.2e-20 103.6 85 61.2
BolC7t42186H Brassica oleracea HOM05D007416 ORTHO05D009329 1.6e-20 103.2 80 66.2
Medtr2g014970 Medicago truncatula HOM05D007416 ORTHO05D009329 1.6e-20 103.2 82 59.8
Aa31LG6G11050 Aethionema arabicum HOM05D007416 ORTHO05D009329 4.5e-20 101.7 53 79.2
EL10Ac8g20461 Beta vulgaris HOM05D007416 ORTHO05D009329 2.9e-19 99.0 66 68.2
FAN11G0205 Fragaria x ananassa HOM05D007416 ORTHO05D009329 3.8e-19 98.6 86 58.1
Mapoly0016s0097 Marchantia polymorpha HOM05D007416 ORTHO05D009329 1.9e-18 96.3 68 61.8
A07p11140 Brassica napus HOM05D007416 ORTHO05D009329 9.8e-15 84.0 65 63.1
Pp3c24_10110 Physcomitrium patens HOM05D007416 ORTHO05D009329 2.8e-14 82.4 55 61.8
AUR62031107 Chenopodium quinoa HOM05D007416 ORTHO05D009329 4.1e-13 78.6 86 44.2
AagrBONN_evm.TU.Sc2ySwM_362.2610 Anthoceros agrestis HOM05D007416 ORTHO05D009329 7.0e-13 77.8 78 46.2
Zm00001eb194760 Zea mays HOM05D007416 ORTHO05D009329 1.3e-06 57.0 75 45.3


User provided reference genes

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