Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv17352 Davidia involucrata HOM05D008934 ORTHO05D011063 3.8e-96 354.8 170 100.0
Gohir.A07G211700 Gossypium hirsutum HOM05D008934 ORTHO05D011063 5.2e-45 184.9 122 71.3
Gorai.001G252000 Gossypium raimondii HOM05D008934 ORTHO05D011063 5.8e-44 181.4 122 69.7
Gohir.D07G217900 Gossypium hirsutum HOM05D008934 ORTHO05D011063 1.3e-43 180.3 122 69.7
Actinidia37639 Actinidia chinensis HOM05D008934 ORTHO05D011063 2.2e-43 179.5 125 70.4
Hma1.2p1_0273F.1_g109860 Hydrangea macrophylla HOM05D008934 ORTHO05D011063 1.9e-42 176.4 122 72.1
COL.COLO4_05166 Corchorus olitorius HOM05D008934 ORTHO05D011063 1.1e-39 167.2 123 65.9
DCAR_005700 Daucus carota HOM05D008934 ORTHO05D011063 1.9e-39 166.4 131 64.9
Manes.13G032700 Manihot esculenta HOM05D008934 ORTHO05D011063 2.1e-38 162.9 124 62.9
Prupe.8G225700 Prunus persica HOM05D008934 ORTHO05D011063 2.1e-38 162.9 131 63.4
Ciclev10024140m.g Citrus clementina HOM05D008934 ORTHO05D011063 8.1e-38 161.0 121 67.8
Potri.002G040300 Populus trichocarpa HOM05D008934 ORTHO05D011063 1.4e-37 160.2 125 62.4
Thecc.01G261000 Theobroma cacao HOM05D008934 ORTHO05D011063 5.2e-37 158.3 122 62.3
FAN24G1664 Fragaria x ananassa HOM05D008934 ORTHO05D011063 8.9e-37 157.5 123 65.9
FvH4_2g21771 Fragaria vesca HOM05D008934 ORTHO05D011063 3.4e-36 155.6 123 64.2
Lsat_1_v5_gn_9_8740 Lactuca sativa HOM05D002084 ORTHO05D002031 5.8e-36 154.8 120 65.0
Glyma.19G163400 Glycine max HOM05D008934 ORTHO05D011063 3.2e-34 149.1 124 58.1
DCAR_018472 Daucus carota HOM05D008934 ORTHO05D011063 9.2e-34 147.5 123 60.2
Aqoxy5G00256 Aquilegia oxysepala HOM05D008934 ORTHO05D011063 1.2e-33 147.1 122 60.7
QL09p038152 Quercus lobata HOM05D008934 ORTHO05D011063 1.6e-33 146.7 125 63.2
Glyma.03G162000 Glycine max HOM05D008934 ORTHO05D011063 4.6e-33 145.2 127 57.5
MSTRG.17484 Avicennia marina HOM05D008934 ORTHO05D011063 7.8e-33 144.4 136 55.1
Lj1g0015516 Lotus japonicus HOM05D008934 ORTHO05D011063 1.6e-30 136.7 122 56.6
TPR.G6884 Trifolium pratense HOM05D008934 ORTHO05D011063 3.6e-30 135.6 125 57.6
CAN.G977.1 Capsicum annuum HOM05D008934 ORTHO05D011063 1.1e-29 134.0 134 54.5
ClCG00G004100 Citrullus lanatus HOM05D008934 ORTHO05D011063 2.6e-28 129.4 124 54.0
ClCG07G000950 Citrullus lanatus HOM05D008934 ORTHO05D011063 2.6e-28 129.4 124 54.0
Medtr7g096660 Medicago truncatula HOM05D008934 ORTHO05D011063 2.6e-28 129.4 123 58.5
Peaxi162Scf00134g00073 Petunia axillaris HOM05D008934 ORTHO05D011063 2.6e-28 129.4 84 72.6
Psat3g058520 Pisum sativum HOM05D008934 ORTHO05D011063 3.4e-28 129.0 123 55.3
Phvul.001G159800 Phaseolus vulgaris HOM05D008934 ORTHO05D011063 5.8e-28 128.3 125 56.0
VMungo1383G2686 Vigna mungo HOM05D008934 ORTHO05D011063 3.8e-27 125.6 115 55.7
CsaV3_3G022550 Cucumis sativus L. HOM05D008934 ORTHO05D011063 1.4e-26 123.6 126 53.2
Migut.N02196 Erythranthe guttata HOM05D008934 ORTHO05D011063 1.9e-26 123.2 141 51.1
Oeu025833.1 Olea europaea HOM05D008934 ORTHO05D011063 9.2e-26 120.9 135 49.6
Sed0020824 Sechium edule HOM05D008934 ORTHO05D011063 6.0e-25 118.2 123 49.6
SalBow6G6555 Salvia bowleyana HOM05D004750 ORTHO05D006207 1.7e-24 116.7 128 49.2
arahy.Tifrunner.gnm1.ann1.FL6YF2 Arachis hypogaea HOM05D008934 ORTHO05D011063 7.1e-18 94.7 149 41.6
Cc01_g18460 Coffea canephora HOM05D008934 ORTHO05D011063 1.3e-14 84.0 124 41.9
arahy.Tifrunner.gnm1.ann1.XZSU6S Arachis hypogaea HOM05D008934 ORTHO05D011063 1.6e-14 83.6 57 73.7


User provided reference genes

Program Settings