Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv17238 Davidia involucrata HOM05D005356 ORTHO05D006596 2.0e-231 805.4 412 100.0
TAR375G1012 Trochodendron aralioides HOM05D005356 ORTHO05D006596 7.4e-162 574.3 411 75.2
Hma1.2p1_0564F.1_g179310 Hydrangea macrophylla HOM05D005356 ORTHO05D006596 9.0e-160 567.4 414 74.6
Hma1.2p1_0419F.1_g149580 Hydrangea macrophylla HOM05D005356 ORTHO05D006596 1.5e-159 566.6 415 73.3
FvH4_7g34281 Fragaria vesca HOM05D005356 ORTHO05D006596 3.4e-159 565.5 380 74.2
Prupe.2G329800 Prunus persica HOM05D005356 ORTHO05D006596 3.4e-159 565.5 355 77.2
TAR629G3426 Trochodendron aralioides HOM05D005356 ORTHO05D006596 3.4e-159 565.5 417 72.4
Sabra13G0065300 Salix brachista HOM05D005356 ORTHO05D006596 8.5e-158 560.8 415 71.1
Nn1g09227 Nelumbo nucifera HOM05D005356 ORTHO05D006596 2.5e-157 559.3 379 74.7
Thecc.05G227000 Theobroma cacao HOM05D005356 ORTHO05D006596 2.5e-157 559.3 354 78.8
RcHm_v2.0_Chr1g0384641 Rosa chinensis HOM05D005356 ORTHO05D006596 9.4e-157 557.4 357 76.5
Potri.013G076100 Populus trichocarpa HOM05D005356 ORTHO05D006596 1.6e-156 556.6 414 70.8
CiPaw.05G210900 Carya illinoinensis HOM05D005356 ORTHO05D006596 1.8e-155 553.1 401 71.8
Manes.08G159200 Manihot esculenta HOM05D005356 ORTHO05D006596 1.5e-154 550.1 399 71.2
MD07G1311300 Malus domestica HOM05D005356 ORTHO05D006596 2.0e-154 549.7 352 77.0
Atru.chr12.1818 Acer truncatum HOM05D005356 ORTHO05D006596 5.7e-154 548.1 361 76.5
CiPaw.06G037000 Carya illinoinensis HOM05D005356 ORTHO05D006596 2.0e-151 539.7 403 69.7
Hund11857 Selenicereus undatus HOM05D005356 ORTHO05D006596 1.0e-150 537.3 426 66.7
CAN.G2009.1 Capsicum annuum HOM05D005356 ORTHO05D006596 8.5e-150 534.3 421 64.8
Nitab4.5_0002990g0020 Nicotiana tabacum HOM05D005356 ORTHO05D006596 2.5e-149 532.7 422 65.6
PSO782G1515 Papaver somniferum HOM05D005356 ORTHO05D006596 7.2e-149 531.2 421 67.7
Nn3g19190 Nelumbo nucifera HOM05D005356 ORTHO05D006596 9.4e-149 530.8 416 67.1
DCAR_009031 Daucus carota HOM05D005356 ORTHO05D006596 1.2e-148 530.4 350 74.6
Nitab4.5_0000299g0040 Nicotiana tabacum HOM05D005356 ORTHO05D006596 1.2e-148 530.4 422 65.4
Aqoxy1G01762 Aquilegia oxysepala HOM05D005356 ORTHO05D006596 2.7e-148 529.3 398 68.6
Ciclev10031697m.g Citrus clementina HOM05D005356 ORTHO05D006596 2.7e-148 529.3 396 69.9
Sabra19G0053800 Salix brachista HOM05D005356 ORTHO05D006596 4.7e-148 528.5 434 65.4
PGSC0003DMG400024812 Solanum tuberosum HOM05D005356 ORTHO05D006596 4.7e-148 528.5 419 64.9
Solyc04g064720.3 Solanum lycopersicum HOM05D005356 ORTHO05D006596 6.1e-148 528.1 419 65.4
Sopen04g026680 Solanum pennellii HOM05D005356 ORTHO05D006596 6.1e-148 528.1 419 65.4
Gorai.004G255200 Gossypium raimondii HOM05D005356 ORTHO05D006596 7.9e-148 527.7 397 70.5
Cc10_g12920 Coffea canephora HOM05D005356 ORTHO05D006596 3.9e-147 525.4 349 74.2
COL.COLO4_32921 Corchorus olitorius HOM05D005356 ORTHO05D006596 3.9e-147 525.4 353 73.9
Peaxi162Scf00263g00323 Petunia axillaris HOM05D005356 ORTHO05D006596 6.7e-147 524.6 424 64.9
GSVIVG01024263001 Vitis vinifera HOM05D005356 ORTHO05D006596 8.8e-147 524.2 404 69.3
Aqoxy3G04210 Aquilegia oxysepala HOM05D005356 ORTHO05D006596 1.1e-146 523.9 394 68.3
Gohir.A08G221634 Gossypium hirsutum HOM05D005356 ORTHO05D006596 2.0e-146 523.1 362 73.5
HanXRQChr05g0139001 Helianthus annuus HOM05D005356 ORTHO05D006596 1.7e-145 520.0 361 72.0
CANSAT21G1742 Cannabis sativa HOM05D005356 ORTHO05D006596 4.8e-145 518.5 345 75.1
Lsat_1_v5_gn_9_47941 Lactuca sativa HOM05D005356 ORTHO05D006596 6.3e-145 518.1 352 72.7
ECA232G1465 Erigeron canadensis HOM05D005356 ORTHO05D006596 4.1e-144 515.4 346 72.3
Lj3g0010653 Lotus japonicus HOM05D005356 ORTHO05D006596 4.1e-144 515.4 383 68.4
Gorai.007G246900 Gossypium raimondii HOM05D005356 ORTHO05D006596 2.0e-143 513.1 367 70.6
Gohir.D11G234600 Gossypium hirsutum HOM05D005356 ORTHO05D006596 4.5e-143 511.9 367 70.3
Oeu030531.2 Olea europaea HOM05D005356 ORTHO05D006596 1.0e-142 510.8 418 63.4
Gohir.A11G226000 Gossypium hirsutum HOM05D005356 ORTHO05D006596 1.3e-142 510.4 348 72.4
THA.LOC104820830 Tarenaya hassleriana HOM05D005356 ORTHO05D006596 2.2e-142 509.6 352 69.3
Medtr0172s0020 Medicago truncatula HOM05D005356 ORTHO05D006596 1.1e-141 507.3 316 77.2
PGR131G0008 Punica granatum HOM05D005356 ORTHO05D006596 1.5e-141 506.9 396 67.7
Migut.N03237 Erythranthe guttata HOM05D005356 ORTHO05D006596 4.2e-141 505.4 419 65.2
PGR119G0933 Punica granatum HOM05D005356 ORTHO05D006596 4.2e-141 505.4 379 69.4
Eucgr.A02993 Eucalyptus grandis HOM05D005356 ORTHO05D006596 1.6e-140 503.4 384 68.8
EL10Ac3g05893 Beta vulgaris HOM05D005356 ORTHO05D006596 2.7e-140 502.7 418 64.1
arahy.Tifrunner.gnm1.ann1.509DQ1 Arachis hypogaea HOM05D005356 ORTHO05D006596 3.6e-140 502.3 345 72.8
PGR008G0003 Punica granatum HOM05D005356 ORTHO05D006596 6.1e-140 501.5 370 70.3
FAN03G1362 Fragaria x ananassa HOM05D005356 ORTHO05D006596 1.4e-139 500.4 346 73.4
ATR0369G003 Amborella trichopoda HOM05D005356 ORTHO05D006596 1.8e-139 500.0 317 76.0
arahy.Tifrunner.gnm1.ann1.RW14FX Arachis hypogaea HOM05D005356 ORTHO05D006596 1.8e-139 500.0 371 69.3
Migut.C01041 Erythranthe guttata HOM05D005356 ORTHO05D006596 2.3e-139 499.6 418 62.0
THA.LOC104802905 Tarenaya hassleriana HOM05D005356 ORTHO05D006596 3.0e-139 499.2 352 70.7
Phvul.011G016500 Phaseolus vulgaris HOM05D005356 ORTHO05D006596 4.0e-139 498.8 317 76.0
Actinidia33804 Actinidia chinensis HOM05D005356 ORTHO05D006596 8.8e-139 497.7 403 67.5
AUR62002252 Chenopodium quinoa HOM05D005356 ORTHO05D006596 2.0e-138 496.5 361 69.3
Glyma.12G013400 Glycine max HOM05D005356 ORTHO05D006596 2.2e-137 493.0 317 75.4
Aa31LG11G12150 Aethionema arabicum HOM05D005356 ORTHO05D006596 2.8e-137 492.7 316 75.0
TPR.G9827 Trifolium pratense HOM05D005356 ORTHO05D006596 3.7e-137 492.3 339 72.3
A02p04240 Brassica napus HOM05D005356 ORTHO05D006596 1.1e-136 490.7 350 69.1
BraA02t05387Z Brassica rapa HOM05D005356 ORTHO05D006596 1.1e-136 490.7 350 69.1
CARHR195670 Cardamine hirsuta HOM05D005356 ORTHO05D006596 1.1e-136 490.7 350 67.7
BolC2t06824H Brassica oleracea HOM05D005356 ORTHO05D006596 1.4e-136 490.3 350 68.9
BcaC03g13524 Brassica carinata HOM05D005356 ORTHO05D006596 1.8e-136 490.0 350 69.1
C02p09120 Brassica napus HOM05D005356 ORTHO05D006596 5.3e-136 488.4 350 68.9
MD01G1240200 Malus domestica HOM05D005356 ORTHO05D006596 5.3e-136 488.4 352 71.3
Sed0019262 Sechium edule HOM05D005356 ORTHO05D006596 1.6e-135 486.9 352 67.9
Lalb_Chr01g0000721 Lupinus albus HOM05D005356 ORTHO05D006596 2.6e-135 486.1 316 74.4
Psat0s2502g0200 Pisum sativum HOM05D005356 ORTHO05D006596 5.9e-135 485.0 378 64.8
Sed0017544 Sechium edule HOM05D005356 ORTHO05D006596 5.9e-135 485.0 387 64.9
Sp6g26700 Schrenkiella parvula HOM05D005356 ORTHO05D006596 2.2e-134 483.0 350 67.4
CsaV3_2G035860 Cucumis sativus L. HOM05D005356 ORTHO05D006596 3.8e-134 482.3 410 62.2
AUR62015463 Chenopodium quinoa HOM05D005356 ORTHO05D006596 1.5e-133 480.3 388 64.2
SalBow7G2700 Salvia bowleyana HOM05D005356 ORTHO05D006596 1.5e-133 480.3 395 62.3
Os04g0602400 Oryza sativa ssp. japonica HOM05D005356 ORTHO05D006596 1.9e-133 479.9 406 63.5
Oeu015013.2 Olea europaea HOM05D005356 ORTHO05D006596 3.2e-133 479.2 492 54.7
AL6G28610 Arabidopsis lyrata HOM05D005356 ORTHO05D006596 9.4e-133 477.6 350 66.9
MELO3C024754.2 Cucumis melo HOM05D005356 ORTHO05D006596 1.2e-132 477.2 403 62.3
Rhsim09G0214300 Rhododendron simsii HOM05D005356 ORTHO05D006596 4.7e-132 475.3 624 48.7
AT5G17520 Arabidopsis thaliana HOM05D005356 ORTHO05D006596 1.4e-131 473.8 354 66.4
BcaB08g36764 Brassica carinata HOM05D005356 ORTHO05D006596 2.3e-131 473.0 315 73.0
BraA10t44246Z Brassica rapa HOM05D005356 ORTHO05D006596 3.0e-131 472.6 352 67.9
MSTRG.24194 Avicennia marina HOM05D005356 ORTHO05D006596 4.0e-131 472.2 351 67.0
VMungo0647G2360 Vigna mungo HOM05D005356 ORTHO05D006596 1.5e-130 470.3 301 75.1
A10p21870 Brassica napus HOM05D005356 ORTHO05D006596 2.0e-130 469.9 317 72.6
Manes.09G130400 Manihot esculenta HOM05D005356 ORTHO05D006596 2.0e-130 469.9 359 66.3
C09p59620 Brassica napus HOM05D005356 ORTHO05D006596 1.7e-129 466.8 317 71.9
BolC9t58801H Brassica oleracea HOM05D005356 ORTHO05D006596 1.7e-129 466.8 317 71.9
BcaC04g18781 Brassica carinata HOM05D005356 ORTHO05D006596 2.2e-129 466.5 317 71.6
SalBow6G3313 Salvia bowleyana HOM05D005356 ORTHO05D006596 6.3e-129 464.9 417 59.7
PSO063G2098 Papaver somniferum HOM05D005356 ORTHO05D006596 9.4e-125 451.1 371 66.8
MSTRG.22381 Avicennia marina HOM05D005356 ORTHO05D006596 6.1e-124 448.4 351 64.4
Lj3A883T53 Lonicera japonica HOM05D005356 ORTHO05D006596 1.5e-122 443.7 293 76.8
Cpa.g.sc43.152 Carica papaya HOM05D005356 ORTHO05D006596 1.7e-121 440.3 346 70.5
unitig_744.g24563 Utricularia gibba HOM05D005356 ORTHO05D006596 2.2e-121 439.9 331 66.5
Duzib177G1190 Durio zibethinus HOM05D005356 ORTHO05D006596 8.3e-121 438.0 285 78.6
SGA_v2.0_scaffold19G08642 Striga asiatica HOM05D005356 ORTHO05D006596 6.6e-118 428.3 311 67.8
A10p21860 Brassica napus HOM05D005356 ORTHO05D006596 8.6e-118 427.9 290 72.8
Gohir.D08G239900 Gossypium hirsutum HOM05D005356 ORTHO05D006596 3.3e-117 426.0 270 77.4
Ca_19620_v3 Cicer arietinum L. HOM05D005356 ORTHO05D006596 4.7e-116 422.2 278 73.7
SEGI_37553 Sequoiadendron giganteum HOM05D005356 ORTHO05D006596 1.2e-114 417.5 315 64.4
Haze_00348 Corylus avellana HOM05D005356 ORTHO05D006596 1.3e-113 414.1 366 63.7
ClCG02G007870 Citrullus lanatus HOM05D005356 ORTHO05D006596 6.0e-103 378.6 299 63.9
Carub.0006s1575 Capsella rubella HOM05D005356 ORTHO05D006596 1.0e-102 377.9 261 68.2
CDE11G1065 Ceratophyllum demersum HOM05D005356 ORTHO05D006596 4.4e-98 362.5 316 60.1
Mapoly0051s0014 Marchantia polymorpha HOM05D005356 ORTHO05D006596 1.1e-96 357.8 315 53.3
Pp3c6_18710 Physcomitrium patens HOM05D005356 ORTHO05D006596 3.5e-95 352.8 353 49.9
AagrBONN_evm.TU.Sc2ySwM_228.477 Anthoceros agrestis HOM05D005356 ORTHO05D006596 1.3e-94 350.9 314 54.5
MBI04_g30781_MAGBIO Magnolia biondii HOM05D005356 ORTHO05D006596 3.3e-93 346.3 296 64.2
CANSAT21G0168 Cannabis sativa HOM05D005356 ORTHO05D006596 1.1e-91 341.3 276 64.1
SMO012G0030 Selaginella moellendorffii HOM05D005356 ORTHO05D006596 4.0e-91 339.3 333 51.1
Pp3c24_890 Physcomitrium patens HOM05D005356 ORTHO05D006596 1.3e-89 334.3 310 54.2
Sopen04g026690 Solanum pennellii HOM05D005356 ORTHO05D006596 1.2e-87 327.8 297 60.6
HPP92_022764 Vanilla planifolia HOM05D005356 ORTHO05D006596 7.3e-85 318.5 220 65.5
vmacro22188 Vaccinium macrocarpon HOM05D005356 ORTHO05D006596 8.9e-83 311.6 320 58.1
CSS0033101 Camellia sinensis var. sinensis HOM05D005356 ORTHO05D006596 2.6e-82 310.1 262 67.6
CANSAT21G1370 Cannabis sativa HOM05D005356 ORTHO05D006596 7.8e-79 298.5 173 82.1
SMO118G0252 Selaginella moellendorffii HOM05D005356 ORTHO05D006596 6.6e-78 295.4 269 56.5
Sc03g0005650 Simmondsia chinensis HOM05D005356 ORTHO05D006596 8.7e-78 295.0 208 73.1
Zm00001eb071770 Zea mays HOM05D005356 ORTHO05D006596 1.3e-65 254.6 183 71.0
Pp3c23_14070 Physcomitrium patens HOM05D005356 ORTHO05D006596 4.9e-65 252.7 245 53.5
Actinidia04557 Actinidia chinensis HOM05D005356 ORTHO05D006596 9.3e-64 248.4 361 45.4
Thhalv10016106m.g Eutrema salsugineum HOM05D005356 ORTHO05D006596 1.9e-45 187.6 117 69.2
AT5G17523 Arabidopsis thaliana HOM05D005356 ORTHO05D006596 1.2e-42 178.3 162 61.1
MCO10G093 Micromonas commoda HOM05D005356 ORTHO05D006596 3.4e-42 176.8 335 33.7
Pp3c24_840 Physcomitrium patens HOM05D005356 ORTHO05D006596 9.4e-40 168.7 150 55.3
Glyma.09G223400 Glycine max HOM05D005356 ORTHO05D006596 6.3e-36 156.0 93 74.2
Cre12.g486600 Chlamydomonas reinhardtii HOM05D005356 ORTHO05D006596 5.0e-33 146.4 305 31.1
CSS0037967 Camellia sinensis var. sinensis HOM05D005356 ORTHO05D006596 5.5e-32 142.9 75 89.3
PRCOL_00004977 Prasinoderma coloniale HOM05D005356 ORTHO05D006596 3.7e-28 130.2 294 31.6
CBR_g17686 Chara braunii HOM05D005356 ORTHO05D006596 5.0e-25 119.8 97 52.6
CBR_g17688 Chara braunii HOM05D005356 ORTHO05D006596 8.5e-17 92.4 98 46.9
Zm00001eb003380 Zea mays HOM05D001522 ORTHO05D001547 1.1e-16 92.0 78 64.1
HPP92_022763 Vanilla planifolia HOM05D005356 ORTHO05D006596 3.4e-13 80.5 47 78.7
Pp3c21_10850 Physcomitrium patens HOM05D005356 ORTHO05D310352 5.7e-13 79.7 188 25.5


User provided reference genes

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