Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv17076 Davidia involucrata HOM05D005457 ORTHO05D006350 0.0e+00 2795.4 1569 100.0
Dinv43020 Davidia involucrata HOM05D005457 ORTHO05D006350 0.0e+00 2795.4 1569 100.0
Dinv43077 Davidia involucrata HOM05D005457 ORTHO05D006350 0.0e+00 2795.4 1569 100.0
Dinv34321 Davidia involucrata HOM05D005457 ORTHO05D006350 0.0e+00 1796.2 1657 70.6
Hma1.2p1_0543F.1_g175290 Hydrangea macrophylla HOM05D005457 ORTHO05D006350 0.0e+00 1284.2 1613 56.2
GSVIVG01024823001 Vitis vinifera HOM05D005457 ORTHO05D006350 2.3e-304 1049.7 1767 48.7
Haze_24232 Corylus avellana HOM05D005457 ORTHO05D006350 2.0e-292 1010.0 1637 49.4
vmacro03007 Vaccinium macrocarpon HOM05D005457 ORTHO05D006350 4.3e-279 965.7 1612 48.8
Lj1C143T9 Lonicera japonica HOM05D005457 ORTHO05D006350 5.9e-276 955.3 1580 46.3
CSS0049881 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 6.3e-270 935.3 1250 56.1
TAR369G0749 Trochodendron aralioides HOM05D005457 ORTHO05D006350 1.1e-269 934.5 1806 45.4
Rhsim13G0075000 Rhododendron simsii HOM05D005457 ORTHO05D006350 1.4e-266 924.1 1662 45.1
CSS0035455 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 3.7e-262 909.4 1200 50.1
QL01p028955 Quercus lobata HOM05D005457 ORTHO05D006350 4.1e-261 906.0 1600 46.5
CiPaw.13G084000 Carya illinoinensis HOM05D005457 ORTHO05D006350 4.5e-244 849.4 1603 44.9
Atru.chr3.4038 Acer truncatum HOM05D005457 ORTHO05D006350 5.0e-243 845.9 1611 45.4
Ciclev10027683m.g Citrus clementina HOM05D005457 ORTHO05D006350 1.3e-238 831.2 1621 45.5
Actinidia25123 Actinidia chinensis HOM05D005457 ORTHO05D006350 3.7e-238 829.7 1055 53.1
Prupe.6G064800 Prunus persica HOM05D005457 ORTHO05D006350 9.8e-231 805.1 1637 42.9
CSS0006949 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 8.0e-225 785.4 1128 47.3
Nn2g11331 Nelumbo nucifera HOM05D005457 ORTHO05D006350 4.4e-223 779.6 1718 45.9
ClCG03G001030 Citrullus lanatus HOM05D005457 ORTHO05D006350 2.1e-220 770.8 1662 42.8
Nn2g13569 Nelumbo nucifera HOM05D005457 ORTHO05D006350 4.4e-215 753.1 1779 43.2
Thecc.09G309000 Theobroma cacao HOM05D005457 ORTHO05D006350 1.7e-211 741.1 1645 44.5
CsaV3_1G035890 Cucumis sativus L. HOM05D005457 ORTHO05D006350 1.6e-204 718.0 1656 44.6
MD11G1084500 Malus domestica HOM05D005457 ORTHO05D006350 3.4e-199 700.3 1581 41.2
Manes.02G123500 Manihot esculenta HOM05D005457 ORTHO05D006350 3.0e-195 687.2 1644 42.8
Gorai.003G125700 Gossypium raimondii HOM05D005457 ORTHO05D006350 1.5e-186 658.3 1585 41.6
Gorai.003G125900 Gossypium raimondii HOM05D005457 ORTHO05D006350 2.5e-186 657.5 1585 40.7
FAN16G3594 Fragaria x ananassa HOM05D005457 ORTHO05D006350 4.3e-186 656.8 1617 39.1
Sopen09g014590 Solanum pennellii HOM05D005457 ORTHO05D006350 1.6e-185 654.8 1593 37.4
FvH4_3g37470 Fragaria vesca HOM05D005457 ORTHO05D006350 2.1e-185 654.4 1619 37.7
Sabra09G0028400 Salix brachista HOM05D005457 ORTHO05D006350 4.8e-185 653.3 1627 40.1
FAN21G0431 Fragaria x ananassa HOM05D005457 ORTHO05D006350 6.2e-185 652.9 1634 38.3
Cc00_g21960 Coffea canephora HOM05D005457 ORTHO05D006350 2.4e-184 651.0 1623 40.1
Solyc09g031650.3 Solanum lycopersicum HOM05D005457 ORTHO05D006350 2.4e-184 651.0 1604 37.7
Gohir.D03G119400 Gossypium hirsutum HOM05D005457 ORTHO05D006350 4.0e-184 650.2 1625 39.9
FAN25G1264 Fragaria x ananassa HOM05D005457 ORTHO05D006350 8.4e-182 642.5 1641 37.8
FAN11G1716 Fragaria x ananassa HOM05D005457 ORTHO05D006350 4.2e-181 640.2 1631 37.3
Peaxi162Scf00433g00116 Petunia axillaris HOM05D005457 ORTHO05D006350 1.2e-180 638.6 1616 36.5
Gohir.D03G119500 Gossypium hirsutum HOM05D005457 ORTHO05D006350 8.7e-179 632.5 1580 40.4
Gohir.A03G047600 Gossypium hirsutum HOM05D005457 ORTHO05D006350 4.3e-178 630.2 1584 38.6
Lj2A1073T53 Lonicera japonica HOM05D005457 ORTHO05D006350 8.2e-177 625.9 1048 43.1
Sc12g0001060 Simmondsia chinensis HOM05D005457 ORTHO05D006350 1.7e-174 618.2 1648 38.8
MD03G1079900 Malus domestica HOM05D005457 ORTHO05D006350 1.9e-173 614.8 1632 37.9
Hund11609 Selenicereus undatus HOM05D005457 ORTHO05D006350 3.5e-172 610.5 1615 41.6
Gohir.A03G047700 Gossypium hirsutum HOM05D005457 ORTHO05D006350 1.8e-171 608.2 1592 40.6
Sed0019872 Sechium edule HOM05D005457 ORTHO05D006350 5.1e-171 606.7 1650 39.2
Potri.001G247100 Populus trichocarpa HOM05D005457 ORTHO05D006350 8.7e-171 605.9 1610 38.9
Aqoxy1G00759 Aquilegia oxysepala HOM05D005457 ORTHO05D006350 9.4e-165 585.9 1642 39.0
EL10Ac7g16099 Beta vulgaris HOM05D005457 ORTHO05D006350 6.1e-164 583.2 1631 39.1
Lsat_1_v5_gn_9_25441 Lactuca sativa HOM05D005457 ORTHO05D006350 3.3e-162 577.4 1594 37.9
ECA247G2917 Erigeron canadensis HOM05D005457 ORTHO05D006350 1.2e-159 568.9 1562 36.5
CAN.G1002.16 Capsicum annuum HOM05D005457 ORTHO05D006350 2.6e-159 567.8 1610 35.6
HanXRQChr08g0237081 Helianthus annuus HOM05D005457 ORTHO05D006350 1.8e-155 555.1 1572 39.1
Phvul.011G009900 Phaseolus vulgaris HOM05D005457 ORTHO05D006350 3.3e-154 550.8 1591 38.0
Actinidia08557 Actinidia chinensis HOM05D005457 ORTHO05D006350 1.5e-149 535.4 747 46.7
COL.COLO4_19073 Corchorus olitorius HOM05D005457 ORTHO05D006350 1.4e-147 528.9 1507 35.4
DCAR_027735 Daucus carota HOM05D005457 ORTHO05D006350 3.0e-147 527.7 1571 36.4
AUR62001711 Chenopodium quinoa HOM05D005457 ORTHO05D006350 3.7e-145 520.8 1592 35.7
VMungo1127G1417 Vigna mungo HOM05D005457 ORTHO05D006350 1.9e-141 508.4 1597 37.3
Nitab4.5_0000752g0010 Nicotiana tabacum HOM05D005457 ORTHO05D006350 2.7e-140 504.6 1343 37.2
Glyma.12G007800 Glycine max HOM05D005457 ORTHO05D006350 3.4e-138 497.7 1588 37.5
Ah.14g082630 Amaranthus hybridus HOM05D005457 ORTHO05D006350 1.4e-136 492.3 1620 37.0
Lalb_Chr01g0000381 Lupinus albus HOM05D005457 ORTHO05D006350 1.5e-133 482.3 1555 35.8
arahy.Tifrunner.gnm1.ann1.L17SH6 Arachis hypogaea HOM05D005457 ORTHO05D006350 5.2e-131 473.8 1578 37.3
Glyma.09G228800 Glycine max HOM05D005457 ORTHO05D006350 4.1e-128 464.2 1599 36.7
Ca_19579_v3 Cicer arietinum L. HOM05D005457 ORTHO05D006350 1.0e-126 459.5 1583 38.0
SalBow2G3533 Salvia bowleyana HOM05D005457 ORTHO05D006350 3.3e-125 454.5 1626 34.7
SHI05894 Sapria himalayana HOM05D005457 ORTHO05D006350 1.2e-124 452.6 1688 35.9
MELO3C020581.2 Cucumis melo HOM05D005457 ORTHO05D006350 6.1e-124 450.3 1096 37.9
Psat7g154880 Pisum sativum HOM05D005457 ORTHO05D006350 4.0e-123 447.6 1586 35.9
Lj3g0007084 Lotus japonicus HOM05D005457 ORTHO05D006350 4.4e-122 444.1 1591 37.5
arahy.Tifrunner.gnm1.ann1.U9UY67 Arachis hypogaea HOM05D005457 ORTHO05D006350 9.8e-122 443.0 1583 35.1
MBI14_g32923_MAGBIO Magnolia biondii HOM05D005457 ORTHO05D006350 3.2e-120 438.0 1228 35.7
Nitab4.5_0006476g0010 Nicotiana tabacum HOM05D005457 ORTHO05D006350 2.0e-119 435.3 1214 36.1
RcHm_v2.0_Chr5g0067371 Rosa chinensis HOM05D005457 ORTHO05D006350 2.0e-119 435.3 875 45.1
DCAR_027739 Daucus carota HOM05D005457 ORTHO05D006350 9.8e-114 416.4 1671 30.5
Migut.N00905 Erythranthe guttata HOM05D005457 ORTHO05D006350 2.2e-113 415.2 1535 34.3
TAR623G0390 Trochodendron aralioides HOM05D005457 ORTHO05D006350 6.2e-108 397.1 718 42.3
DCAR_027737 Daucus carota HOM05D005457 ORTHO05D006350 5.8e-106 390.6 1565 32.3
PSO782G3368 Papaver somniferum HOM05D005457 ORTHO05D006350 1.1e-104 386.3 1589 33.1
Medtr4g037575 Medicago truncatula HOM05D005457 ORTHO05D006350 7.1e-104 383.6 1591 37.1
Potri.009G040500 Populus trichocarpa HOM05D005457 ORTHO05D006350 8.6e-102 376.7 1275 34.3
TPR.G3642 Trifolium pratense HOM05D005457 ORTHO05D006350 8.6e-102 376.7 1567 33.8
ATR0618G328 Amborella trichopoda HOM05D005457 ORTHO05D006350 1.1e-101 376.3 1742 34.0
PGSC0003DMG400006701 Solanum tuberosum HOM05D005457 ORTHO05D006350 4.3e-101 374.4 1112 34.0
Cpa.g.sc112.89 Carica papaya HOM05D005457 ORTHO05D006350 8.9e-99 366.7 683 55.3
TAR623G1178 Trochodendron aralioides HOM05D005457 ORTHO05D006350 5.4e-96 357.5 276 75.4
SGA_v2.0_scaffold199G41161 Striga asiatica HOM05D005457 ORTHO05D006350 6.0e-95 354.0 1636 32.5
PSO170G6745 Papaver somniferum HOM05D005457 ORTHO05D006350 4.3e-93 347.8 1565 33.1
THA.LOC104799410 Tarenaya hassleriana HOM05D005457 ORTHO05D006350 4.9e-89 334.3 1560 30.4
AUR62020069 Chenopodium quinoa HOM05D005457 ORTHO05D006350 1.6e-84 319.3 670 37.6
Lj2C1073G13 Lonicera japonica HOM05D005457 ORTHO05D006350 4.4e-82 311.2 268 64.9
Eucgr.B02283 Eucalyptus grandis HOM05D005457 ORTHO05D006350 2.7e-79 302.0 1230 32.7
Zm00001eb159160 Zea mays HOM05D005457 ORTHO05D006350 3.9e-70 271.6 175 72.6
HPP92_001490 Vanilla planifolia HOM05D005457 ORTHO05D006350 3.3e-69 268.5 1725 31.5
Zm00001eb358910 Zea mays HOM05D005457 ORTHO05D006350 1.6e-68 266.2 253 57.3
RcHm_v2.0_Chr5g0067361 Rosa chinensis HOM05D005457 ORTHO05D006350 2.1e-68 265.8 429 44.8
MBI14_g32924_MAGBIO Magnolia biondii HOM05D005457 ORTHO05D006350 3.5e-63 248.4 140 78.6
Cpa.g.sc112.90 Carica papaya HOM05D005457 ORTHO05D006350 4.6e-63 248.1 822 31.3
TAR623G1322 Trochodendron aralioides HOM05D005457 ORTHO05D006350 1.3e-62 246.5 383 49.6
Oeu017421.1 Olea europaea HOM05D005457 ORTHO05D006350 2.1e-60 239.2 597 32.7
Manes.01G166000 Manihot esculenta HOM05D005457 ORTHO05D006350 5.5e-56 224.6 784 32.3
Actinidia25125 Actinidia chinensis HOM05D005457 ORTHO05D006350 9.0e-51 207.2 101 92.1
A03p11920 Brassica napus HOM05D005457 ORTHO05D006350 3.2e-48 198.7 225 47.6
CDE09G0137 Ceratophyllum demersum HOM05D000076 ORTHO05D001377 3.6e-47 195.3 102 80.4
BolC3t13849H Brassica oleracea HOM05D005457 ORTHO05D006350 4.6e-47 194.9 233 47.2
Psat5g196760 Pisum sativum HOM05D005457 ORTHO05D002728 7.4e-45 187.6 192 55.7
SEGI_21152 Sequoiadendron giganteum HOM05D005457 ORTHO05D006350 1.5e-42 179.9 188 54.8
Oeu002456.1 Olea europaea HOM05D005457 ORTHO05D006350 2.6e-42 179.1 745 38.7
Prupe.6G064700 Prunus persica HOM05D005457 ORTHO05D006350 5.5e-40 171.4 713 33.0
BcaB08g36300 Brassica carinata HOM05D012589 ORTHO05D006350 3.0e-38 165.6 221 44.3
BraA03t10504Z Brassica rapa HOM05D005457 ORTHO05D006350 4.5e-34 151.8 241 40.2
CSS0043795 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 1.5e-32 146.7 72 88.9
CSS0046602 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 1.5e-32 146.7 72 88.9
Cpa.g.sc112.91 Carica papaya HOM05D005457 ORTHO05D006350 3.2e-32 145.6 125 62.4
Duzib170G0589 Durio zibethinus HOM05D005457 ORTHO05D006350 5.7e-29 134.8 337 33.5
BcaB01g04624 Brassica carinata HOM05D005457 ORTHO05D006350 2.8e-28 132.5 561 27.3
CDE02G3816 Ceratophyllum demersum HOM05D034644 ORTHO05D006350 1.2e-23 117.1 478 28.9
Duzib170G0080 Durio zibethinus HOM05D005457 ORTHO05D006350 3.0e-22 112.5 827 33.1
CDE09G0768 Ceratophyllum demersum HOM05D005457 ORTHO05D006350 4.0e-22 112.1 121 54.5
Actinidia08559 Actinidia chinensis HOM05D005457 ORTHO05D006350 3.4e-21 109.0 52 90.4
unitig_27.g24807 Utricularia gibba HOM05D005457 ORTHO05D006350 1.5e-16 93.6 157 38.2
CBR_g34581 Chara braunii HOM05D005457 ORTHO05D006350 2.1e-15 89.7 131 33.6
Psat2g109120 Pisum sativum HOM05D005457 ORTHO05D006350 4.7e-15 88.6 118 41.5
CBR_g49555 Chara braunii HOM05D005457 ORTHO05D006350 6.1e-15 88.2 140 27.9
CBR_g44392 Chara braunii HOM05D005457 ORTHO05D006350 4.0e-14 85.5 114 36.0
CBR_g34582 Chara braunii HOM05D005457 ORTHO05D006350 5.2e-14 85.1 115 33.9
CBR_g34583 Chara braunii HOM05D005457 ORTHO05D006350 1.5e-13 83.6 114 34.2
CBR_g29779 Chara braunii HOM05D005457 ORTHO05D006350 4.4e-13 82.0 226 25.2
unitig_27.g24810 Utricularia gibba HOM05D005457 ORTHO05D006350 1.1e-11 77.4 53 64.2
Nitab4.5_0006476g0020 Nicotiana tabacum HOM05D005457 ORTHO05D006350 1.2e-10 73.9 93 47.3
Psat0s560g0120 Pisum sativum HOM05D005457 ORTHO05D006350 2.3e-09 69.7 194 29.4
Nn2g14614 Nelumbo nucifera HOM05D005457 ORTHO05D006350 2.9e-09 69.3 92 44.6
Os12g0155300 Oryza sativa ssp. japonica HOM05D005457 ORTHO05D006350 2.5e-08 66.2 92 37.0
PGSC0003DMG400009632 Solanum tuberosum HOM05D005457 ORTHO05D006350 2.5e-08 66.2 43 67.4


User provided reference genes

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