Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv17042 Davidia involucrata HOM05D006297 ORTHO05D007873 5.6e-98 360.9 179 100.0
Dinv43112 Davidia involucrata HOM05D006297 ORTHO05D007873 5.6e-98 360.9 179 100.0
Dinv42987 Davidia involucrata HOM05D006297 ORTHO05D007873 1.3e-65 253.4 135 92.6
Dinv34277 Davidia involucrata HOM05D006297 ORTHO05D007873 1.4e-43 180.3 119 78.2
Actinidia33772 Actinidia chinensis HOM05D006297 ORTHO05D007873 2.5e-37 159.5 120 70.0
Hma1.2p1_0615F.1_g189690 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 2.6e-34 149.4 121 66.1
TAR369G0304 Trochodendron aralioides HOM05D006297 ORTHO05D007873 1.9e-29 133.3 89 71.9
CiPaw.13G089900 Carya illinoinensis HOM05D006297 ORTHO05D007873 1.2e-28 130.6 123 59.3
Migut.D00880 Erythranthe guttata HOM05D006297 ORTHO05D007873 1.2e-28 130.6 130 63.1
QL01p030412 Quercus lobata HOM05D006297 ORTHO05D007873 1.2e-28 130.6 120 62.5
Manes.02G129500 Manihot esculenta HOM05D006297 ORTHO05D007873 4.7e-28 128.6 104 62.5
Nitab4.5_0006916g0050 Nicotiana tabacum HOM05D006297 ORTHO05D007873 8.0e-28 127.9 127 57.5
PGR119G2469 Punica granatum HOM05D006297 ORTHO05D007873 8.0e-28 127.9 122 61.5
Peaxi162Scf00481g00328 Petunia axillaris HOM05D006297 ORTHO05D007873 3.0e-27 125.9 125 59.2
Nn2g13426 Nelumbo nucifera HOM05D006297 ORTHO05D007873 3.9e-27 125.6 123 56.1
Aqoxy1G00878 Aquilegia oxysepala HOM05D006297 ORTHO05D007873 2.0e-26 123.2 123 60.2
Haze_24152 Corylus avellana HOM05D006297 ORTHO05D007873 4.4e-26 122.1 122 60.7
TWI79G0566 Tripterygium wilfordii HOM05D000001 ORTHO05D010418 1.3e-25 120.6 92 66.3
Sabra09G0025100 Salix brachista HOM05D006297 ORTHO05D010418 1.7e-25 120.2 135 53.3
CsaV3_1G034520 Cucumis sativus L. HOM05D006297 ORTHO05D007873 3.7e-25 119.0 104 62.5
MELO3C020609.2 Cucumis melo HOM05D006297 ORTHO05D007873 7.0e-24 114.8 104 60.6
Potri.009G035300 Populus trichocarpa HOM05D006297 ORTHO05D007873 7.0e-24 114.8 135 51.9
MSTRG.18559 Avicennia marina HOM05D006297 ORTHO05D007873 3.5e-23 112.5 129 58.1
Solyc06g076370.4 Solanum lycopersicum HOM05D006297 ORTHO05D007873 7.7e-23 111.3 122 53.3
Sopen06g032780 Solanum pennellii HOM05D006297 ORTHO05D007873 7.7e-23 111.3 122 53.3
CANSAT54G0582 Cannabis sativa HOM05D006297 ORTHO05D007873 3.8e-22 109.0 123 53.7
Ciclev10029821m.g Citrus clementina HOM05D006297 ORTHO05D007873 3.8e-22 109.0 115 53.0
GSVIVG01031399001 Vitis vinifera HOM05D006297 ORTHO05D007873 3.8e-22 109.0 121 51.2
Eucgr.B02311 Eucalyptus grandis HOM05D006297 ORTHO05D007873 8.5e-22 107.8 121 54.5
Nn2g11187 Nelumbo nucifera HOM05D006297 ORTHO05D007873 8.5e-22 107.8 94 61.7
CSS0020880 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 9.4e-21 104.4 107 63.6
SGA_v2.0_scaffold54G19479 Striga asiatica HOM05D006297 ORTHO05D007873 9.4e-21 104.4 129 50.4
Duzib168G2114 Durio zibethinus HOM05D006297 ORTHO05D007873 1.2e-20 104.0 110 50.9
ClCG03G001300 Citrullus lanatus HOM05D006297 ORTHO05D007873 1.6e-20 103.6 114 56.1
Cc01_g13310 Coffea canephora HOM05D006297 ORTHO05D007873 1.6e-20 103.6 124 54.8
Potri.001G243900 Populus trichocarpa HOM05D006297 ORTHO05D007873 1.6e-20 103.6 107 55.1
CSS0015831 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 2.1e-20 103.2 128 52.3
Glyma.13G338800 Glycine max HOM05D006297 ORTHO05D007873 2.7e-20 102.8 137 49.6
Glyma.15G035500 Glycine max HOM05D006297 ORTHO05D007873 4.7e-20 102.1 121 52.9
Glyma.11G136300 Glycine max HOM05D006297 ORTHO05D007873 1.0e-19 100.9 134 50.7
RcHm_v2.0_Chr5g0066301 Rosa chinensis HOM05D006297 ORTHO05D007873 1.4e-19 100.5 132 50.0
Sabra16G0148100 Salix brachista HOM05D000026 ORTHO05D000094 1.8e-19 100.1 130 47.7
CAN.G394.75 Capsicum annuum HOM05D006297 ORTHO05D007873 2.3e-19 99.8 122 52.5
Lj3g0003832 Lotus japonicus HOM05D006297 ORTHO05D007873 5.2e-19 98.6 102 54.9
Rhsim13G0077500 Rhododendron simsii HOM05D000001 ORTHO05D010418 5.2e-19 98.6 92 59.8
Ca_20618_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 6.8e-19 98.2 135 49.6
Thecc.09G316300 Theobroma cacao HOM05D006297 ORTHO05D007873 8.8e-19 97.8 129 49.6
FvH4_3g36910 Fragaria vesca HOM05D006297 ORTHO05D007873 4.4e-18 95.5 133 49.6
Medtr4g064830 Medicago truncatula HOM05D006297 ORTHO05D007873 1.3e-17 94.0 138 48.6
Psat5g118640 Pisum sativum HOM05D006297 ORTHO05D007873 1.3e-17 94.0 115 52.2
Cfa011548 Carpinus fangiana HOM05D006297 ORTHO05D007873 2.2e-17 93.2 94 58.5
TPR.G23574 Trifolium pratense HOM05D006297 ORTHO05D007873 2.2e-17 93.2 140 47.9
COL.COLO4_18571 Corchorus olitorius HOM05D006297 ORTHO05D007873 3.7e-17 92.4 93 58.1
Glyma.12G060000 Glycine max HOM05D006297 ORTHO05D007873 3.7e-17 92.4 139 46.8
Hma1.2p1_0757F.1_g213410 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 4.8e-17 92.0 90 62.2
Medtr2g097710 Medicago truncatula HOM05D006297 ORTHO05D007873 4.8e-17 92.0 118 52.5
DCAR_007431 Daucus carota HOM05D006297 ORTHO05D000003 8.3e-17 91.3 181 37.6
Sed0011562 Sechium edule HOM05D006297 ORTHO05D007873 1.1e-16 90.9 107 52.3
Sc12g0001260 Simmondsia chinensis HOM05D006297 ORTHO05D007873 1.4e-16 90.5 79 57.0
SalBow6G6944 Salvia bowleyana HOM05D006297 ORTHO05D007873 2.4e-16 89.7 174 39.7
Lalb_Chr03g0026471 Lupinus albus HOM05D006297 ORTHO05D007873 3.1e-16 89.4 128 52.3
CiPaw.14G065800 Carya illinoinensis HOM05D006297 ORTHO05D007873 4.1e-16 89.0 129 48.1
Lalb_Chr01g0003491 Lupinus albus HOM05D006297 ORTHO05D007873 5.4e-16 88.6 132 50.8
Sed0017584 Sechium edule HOM05D006297 ORTHO05D007873 9.1e-16 87.8 107 52.3
arahy.Tifrunner.gnm1.ann1.19P32Y Arachis hypogaea HOM05D006297 ORTHO05D007873 4.5e-15 85.5 93 58.1
arahy.Tifrunner.gnm1.ann1.2MBI16 Arachis hypogaea HOM05D006297 ORTHO05D007873 4.5e-15 85.5 93 58.1
Ca_01304_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 5.9e-15 85.1 111 48.6
MD11G1095400 Malus domestica HOM05D006297 ORTHO05D007873 7.7e-15 84.7 133 48.9
AUR62001745 Chenopodium quinoa HOM05D006297 ORTHO05D007873 1.7e-14 83.6 101 51.5
MBI05_g35633_MAGBIO Magnolia biondii HOM05D006297 ORTHO05D007873 2.2e-14 83.2 83 56.6
TPR.G6873 Trifolium pratense HOM05D006297 ORTHO05D007873 2.9e-14 82.8 107 50.5
Phvul.011G061900 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 5.0e-14 82.0 73 64.4
Lalb_Chr22g0352441 Lupinus albus HOM05D006297 ORTHO05D007873 6.5e-14 81.6 103 50.5
Lj3g0014453 Lotus japonicus HOM05D006297 ORTHO05D007873 8.5e-14 81.3 143 48.3
VMungo1127G1804 Vigna mungo HOM05D006297 ORTHO05D007873 1.9e-13 80.1 139 45.3
Prupe.6G070900 Prunus persica HOM05D006297 ORTHO05D007873 2.5e-13 79.7 62 69.4
unitig_899.g15423 Utricularia gibba HOM05D006297 ORTHO05D007873 2.5e-13 79.7 155 44.5
AUR62020026 Chenopodium quinoa HOM05D006297 ORTHO05D007873 3.2e-13 79.3 85 55.3
HanXRQChr05g0135261 Helianthus annuus HOM05D006297 ORTHO05D007873 3.2e-13 79.3 99 48.5
Phvul.L008043 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 3.2e-13 79.3 103 48.5
THA.LOC104799430 Tarenaya hassleriana HOM05D006297 ORTHO05D007873 2.7e-12 76.3 129 41.9
CDE07G0208 Ceratophyllum demersum HOM05D006297 ORTHO05D007873 6.1e-12 75.1 102 46.1
Psat7g210960 Pisum sativum HOM05D006297 ORTHO05D007873 5.2e-11 72.0 136 44.9
Lsat_1_v5_gn_8_72960 Lactuca sativa HOM05D006297 ORTHO05D007873 6.8e-11 71.6 120 41.7
Gohir.D07G104500 Gossypium hirsutum HOM05D006297 ORTHO05D007873 8.8e-11 71.2 101 48.5
Lalb_Chr24g0397191 Lupinus albus HOM05D006297 ORTHO05D007873 2.0e-10 70.1 122 45.1
Hund04923 Selenicereus undatus HOM05D006297 ORTHO05D007873 2.6e-10 69.7 76 53.9
VMungo1080G0409 Vigna mungo HOM05D006297 ORTHO05D007873 7.5e-10 68.2 128 41.4
arahy.Tifrunner.gnm1.ann1.NT76K4 Arachis hypogaea HOM05D006297 ORTHO05D007873 2.8e-09 66.2 66 62.1
A01p26050 Brassica napus HOM05D006297 ORTHO05D007873 1.1e-08 64.3 155 36.1
PGSC0003DMG400030329 Solanum tuberosum HOM05D006297 ORTHO05D007873 1.1e-08 64.3 37 75.7
BcaB05g23510 Brassica carinata HOM05D006297 ORTHO05D007873 1.4e-08 63.9 152 36.8
BolC1t03251H Brassica oleracea HOM05D000026 ORTHO05D007873 1.4e-08 63.9 155 36.1
Thhalv10002567m.g Eutrema salsugineum HOM05D006297 ORTHO05D007873 1.4e-08 63.9 131 38.2
AT3G46750 Arabidopsis thaliana HOM05D006297 ORTHO05D007873 1.8e-08 63.5 126 37.3
Carub.0005s1301 Capsella rubella HOM05D006297 ORTHO05D007873 2.4e-08 63.2 128 37.5
MBI14_g08019_MAGBIO Magnolia biondii HOM05D006297 ORTHO05D007873 2.4e-08 63.2 83 49.4
arahy.Tifrunner.gnm1.ann1.FG1CRE Arachis hypogaea HOM05D006297 ORTHO05D007873 3.1e-08 62.8 66 60.6
BcaC09g49771 Brassica carinata HOM05D006297 ORTHO05D007873 3.1e-08 62.8 155 35.5
C01p33140 Brassica napus HOM05D006297 ORTHO05D007873 3.1e-08 62.8 155 35.5
Nitab4.5_0023946g0010 Nicotiana tabacum HOM05D006297 ORTHO05D007873 3.1e-08 62.8 75 50.7
CARHR154920 Cardamine hirsuta HOM05D006297 ORTHO05D007873 4.1e-08 62.4 152 34.9
BraA01t02522Z Brassica rapa HOM05D006297 ORTHO05D007873 5.4e-08 62.0 115 38.3
FAN11G1892 Fragaria x ananassa HOM05D006297 ORTHO05D007873 5.4e-08 62.0 133 39.8
ATR0680G076 Amborella trichopoda HOM05D004189 ORTHO05D004092 7.0e-08 61.6 85 45.9
AL5G25730 Arabidopsis lyrata HOM05D006297 ORTHO05D007873 7.0e-08 61.6 125 36.8
ATR0559G346 Amborella trichopoda HOM05D006297 ORTHO05D007873 1.2e-07 60.8 78 48.7
A06p20810 Brassica napus HOM05D006297 ORTHO05D007873 2.7e-07 59.7 107 41.1
C03p70940 Brassica napus HOM05D006297 ORTHO05D007873 2.7e-07 59.7 149 36.9
BolC3t19369H Brassica oleracea HOM05D006297 ORTHO05D007873 2.7e-07 59.7 149 36.9
Sp5g14970 Schrenkiella parvula HOM05D006297 ORTHO05D007873 2.7e-07 59.7 121 37.2
MBI18_g30543_MAGBIO Magnolia biondii HOM05D004189 ORTHO05D004092 3.5e-07 59.3 85 45.9
BcaC01g01889 Brassica carinata HOM05D006297 ORTHO05D007873 4.5e-07 58.9 107 42.1
ECA236G4356 Erigeron canadensis HOM05D000034 ORTHO05D000037 1.0e-06 57.8 113 40.7
Carub.0008s1240 Capsella rubella HOM05D004189 ORTHO05D004092 2.9e-06 56.2 70 47.1
EL10Ac7g16061 Beta vulgaris HOM05D006297 ORTHO05D007873 6.6e-06 55.1 62 58.1


User provided reference genes

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