Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv16886 Davidia involucrata HOM05D016153 ORTHO05D013372 1.5e-195 686.0 349 100.0
Dinv34537 Davidia involucrata HOM05D016153 ORTHO05D013372 9.7e-54 214.9 329 41.9
Dinv16892 Davidia involucrata HOM05D016153 ORTHO05D013372 6.3e-53 212.2 297 46.1
Dinv16887 Davidia involucrata HOM05D016153 ORTHO05D013372 4.8e-37 159.5 153 59.5
Dinv16889 Davidia involucrata HOM05D016153 ORTHO05D013372 5.0e-34 149.4 224 43.3
Actinidia01031 Actinidia chinensis HOM05D000480 ORTHO05D013372 3.6e-32 143.3 340 31.8
Dinv34538 Davidia involucrata HOM05D016153 ORTHO05D013372 6.1e-32 142.5 138 57.2
Actinidia01028 Actinidia chinensis HOM05D000480 ORTHO05D000313 1.8e-31 141.0 302 33.8
Ciclev10004971m.g Citrus clementina HOM05D000480 ORTHO05D000313 3.5e-19 100.1 308 27.6
Ciclev10004969m.g Citrus clementina HOM05D000480 ORTHO05D000313 2.9e-18 97.1 317 27.1
TAR375G1019 Trochodendron aralioides HOM05D000480 ORTHO05D000313 8.3e-13 79.0 297 27.3
Atru.chr1.900 Acer truncatum HOM05D000480 ORTHO05D000313 4.1e-12 76.6 362 26.8
TAR058G0001 Trochodendron aralioides HOM05D000480 ORTHO05D000313 5.4e-12 76.3 179 31.8
Atru.chr1.888 Acer truncatum HOM05D000480 ORTHO05D000313 1.6e-11 74.7 325 27.7
Ciclev10006604m.g Citrus clementina HOM05D000480 ORTHO05D013372 2.9e-10 70.5 244 27.0
TAR374G0103 Trochodendron aralioides HOM05D000480 ORTHO05D000313 2.9e-10 70.5 160 32.5
COL.COLO4_10975 Corchorus olitorius HOM05D000480 ORTHO05D000313 5.0e-10 69.7 129 31.8
Actinidia31657 Actinidia chinensis HOM05D016153 ORTHO05D013372 1.9e-09 67.8 226 28.8
Thecc.01G400000 Theobroma cacao HOM05D000480 ORTHO05D000313 4.2e-09 66.6 131 30.5
Hma1.2p1_0502F.1_g167930 Hydrangea macrophylla HOM05D000480 ORTHO05D013372 5.5e-09 66.2 309 23.9
CANSAT25G3728 Cannabis sativa HOM05D000480 ORTHO05D000313 3.6e-08 63.5 131 29.0
BcaC06g33534 Brassica carinata HOM05D000480 ORTHO05D000313 4.7e-08 63.2 284 26.8
A08p20310 Brassica napus HOM05D000480 ORTHO05D000313 4.7e-08 63.2 238 25.2
TAR023G0002 Trochodendron aralioides HOM05D000480 ORTHO05D000313 4.7e-08 63.2 203 28.6
Ciclev10006785m.g Citrus clementina HOM05D000480 ORTHO05D013372 1.0e-07 62.0 247 25.1
PGR142G3359 Punica granatum HOM05D000480 ORTHO05D000313 1.0e-07 62.0 152 30.3
Thhalv10027198m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 1.4e-07 61.6 272 25.0
Nn1g09256 Nelumbo nucifera HOM05D000480 ORTHO05D000313 1.4e-07 61.6 153 32.7
Actinidia25362 Actinidia chinensis HOM05D000480 ORTHO05D000313 1.8e-07 61.2 154 27.9
Eucgr.L00132 Eucalyptus grandis HOM05D000480 ORTHO05D000313 2.3e-07 60.8 158 29.7
Duzib187G1896 Durio zibethinus HOM05D000480 ORTHO05D000313 3.0e-07 60.5 254 23.6
Actinidia21630 Actinidia chinensis HOM05D000480 ORTHO05D000313 5.2e-07 59.7 133 27.8
Gohir.A03G003850 Gossypium hirsutum HOM05D000480 ORTHO05D000313 5.2e-07 59.7 328 24.7
Hma1.2p1_0502F.1_g167920 Hydrangea macrophylla HOM05D000480 ORTHO05D000313 5.2e-07 59.7 138 31.2
PGR031G3290 Punica granatum HOM05D000480 ORTHO05D000313 5.2e-07 59.7 153 30.1
CARHR223630 Cardamine hirsuta HOM05D000480 ORTHO05D000313 8.9e-07 58.9 259 27.4
TAR374G0158 Trochodendron aralioides HOM05D000480 ORTHO05D000313 8.9e-07 58.9 149 35.6
Carub.0006s2975 Capsella rubella HOM05D000480 ORTHO05D000313 1.5e-06 58.2 252 27.0
Thhalv10029125m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 1.5e-06 58.2 274 24.5
CAN.G756.43 Capsicum annuum HOM05D000480 ORTHO05D000313 2.0e-06 57.8 153 28.1
Actinidia04608 Actinidia chinensis HOM05D049994 ORTHO05D000313 2.6e-06 57.4 121 32.2
Thecc.03G145400 Theobroma cacao HOM05D000480 ORTHO05D000313 2.6e-06 57.4 185 25.9
Gohir.A08G242600 Gossypium hirsutum HOM05D000448 ORTHO05D000313 3.4e-06 57.0 287 22.6
Gorai.003G178500 Gossypium raimondii HOM05D000480 ORTHO05D000313 3.4e-06 57.0 333 24.9
GSVIVG01030638001 Vitis vinifera HOM05D000480 ORTHO05D000313 3.4e-06 57.0 131 29.0
THA.LOC104820906 Tarenaya hassleriana HOM05D000480 ORTHO05D000313 4.4e-06 56.6 130 27.7
Atru.chr1.897 Acer truncatum HOM05D000480 ORTHO05D013372 7.5e-06 55.8 262 29.0
Atru.chr7.1876 Acer truncatum HOM05D000448 ORTHO05D000291 7.5e-06 55.8 113 31.9
BraA01t01952Z Brassica rapa HOM05D000480 ORTHO05D000313 7.5e-06 55.8 128 28.9
Gorai.004G281500 Gossypium raimondii HOM05D000448 ORTHO05D000313 7.5e-06 55.8 291 22.3
Thecc.01G399500 Theobroma cacao HOM05D000480 ORTHO05D000313 7.5e-06 55.8 104 32.7
Duzib138G0994 Durio zibethinus HOM05D000480 ORTHO05D000291 9.8e-06 55.5 104 32.7
Gohir.D08G183500 Gossypium hirsutum HOM05D000480 ORTHO05D000313 9.8e-06 55.5 175 28.6
Gorai.004G192600 Gossypium raimondii HOM05D000480 ORTHO05D000313 9.8e-06 55.5 175 28.6


User provided reference genes

Program Settings