Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv16782 Davidia involucrata HOM05D000317 ORTHO05D025110 1.9e-33 145.2 70 100.0
Potri.004G057900 Populus trichocarpa HOM05D000317 ORTHO05D000032 7.4e-14 80.1 60 60.0
Sabra04G0037600 Salix brachista HOM05D000317 ORTHO05D000032 3.1e-12 74.7 60 58.3
CSS0018275 Camellia sinensis var. sinensis HOM05D000317 ORTHO05D000032 4.1e-12 74.3 67 58.2
CiPaw.09G070500 Carya illinoinensis HOM05D000317 ORTHO05D000032 7.0e-12 73.6 64 60.9
GSVIVG01021225001 Vitis vinifera HOM05D000317 ORTHO05D000032 2.6e-11 71.6 67 59.7
Thecc.06G169300 Theobroma cacao HOM05D000317 ORTHO05D000032 7.7e-11 70.1 60 56.7
CiPaw.10G059800 Carya illinoinensis HOM05D000317 ORTHO05D000032 1.0e-10 69.7 63 60.3
Manes.16G040600 Manihot esculenta HOM05D000317 ORTHO05D000032 1.7e-10 68.9 56 64.3
CSS0003450 Camellia sinensis var. sinensis HOM05D000317 ORTHO05D000032 3.8e-10 67.8 48 68.8
Phvul.002G239100 Phaseolus vulgaris HOM05D000317 ORTHO05D000032 6.5e-10 67.0 62 53.2
VMungo0251G1696 Vigna mungo HOM05D000317 ORTHO05D025110 8.5e-10 66.6 62 51.6
Cfa000619 Carpinus fangiana HOM05D000317 ORTHO05D000032 1.1e-09 66.2 63 57.1
Potri.011G067150 Populus trichocarpa HOM05D000317 ORTHO05D000032 1.5e-09 65.9 61 57.4
Glyma.05G158900 Glycine max HOM05D000317 ORTHO05D000032 7.2e-09 63.5 62 51.6
Duzib061G0002 Durio zibethinus HOM05D000317 ORTHO05D000032 9.4e-09 63.2 60 53.3
Manes.17G056600 Manihot esculenta HOM05D000317 ORTHO05D000032 9.4e-09 63.2 62 53.2
DCAR_027996 Daucus carota HOM05D000317 ORTHO05D025110 2.1e-08 62.0 55 56.4
Atru.chr10.1652 Acer truncatum HOM05D000317 ORTHO05D000032 3.6e-08 61.2 65 50.8
QL05p047511 Quercus lobata HOM05D000317 ORTHO05D000032 3.6e-08 61.2 63 57.1
Glyma.08G116700 Glycine max HOM05D000317 ORTHO05D000032 8.0e-08 60.1 62 50.0
Medtr8g086410 Medicago truncatula HOM05D000317 ORTHO05D000032 1.0e-07 59.7 61 49.2
Nitab4.5_0000605g0080 Nicotiana tabacum HOM05D000317 ORTHO05D000032 1.0e-07 59.7 70 47.1
Actinidia39512 Actinidia chinensis HOM05D000317 ORTHO05D000032 1.4e-07 59.3 68 50.0
Gohir.A05G154400 Gossypium hirsutum HOM05D000317 ORTHO05D000032 1.4e-07 59.3 56 55.4
Prupe.4G062400 Prunus persica HOM05D000317 ORTHO05D000032 1.4e-07 59.3 44 59.1
Gorai.009G161800 Gossypium raimondii HOM05D000317 ORTHO05D000032 3.0e-07 58.2 56 53.6
COL.COLO4_31281 Corchorus olitorius HOM05D000317 ORTHO05D000032 4.0e-07 57.8 61 47.5
Lj4g0000619 Lotus japonicus HOM05D000317 ORTHO05D000032 6.7e-07 57.0 63 49.2
Ciclev10016791m.g Citrus clementina HOM05D000317 ORTHO05D025110 1.2e-06 56.2 58 60.3
Nitab4.5_0006324g0050 Nicotiana tabacum HOM05D000317 ORTHO05D000032 1.2e-06 56.2 72 45.8
Oeu039910.1 Olea europaea HOM05D000317 ORTHO05D000032 2.0e-06 55.5 68 45.6
Eucgr.E02753 Eucalyptus grandis HOM05D000317 ORTHO05D025110 2.6e-06 55.1 64 45.3
Duzib192G0727 Durio zibethinus HOM05D000317 ORTHO05D000032 7.5e-06 53.5 47 57.4
CAN.G370.92 Capsicum annuum HOM05D000317 ORTHO05D000032 9.7e-06 53.1 67 41.8


User provided reference genes

Program Settings