Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv16729 Davidia involucrata HOM05D001391 ORTHO05D005432 1.3e-182 642.9 325 100.0
SGA_v2.0_scaffold16G07780 Striga asiatica HOM05D001391 ORTHO05D005432 7.7e-138 494.2 298 84.9
CiPaw.06G092300 Carya illinoinensis HOM05D001391 ORTHO05D005432 7.2e-136 487.6 305 81.0
Dinv34072 Davidia involucrata HOM05D001391 ORTHO05D005432 1.2e-135 486.9 277 88.8
Lj3C1030G23 Lonicera japonica HOM05D001391 ORTHO05D005432 1.8e-134 483.0 275 89.1
TWI31G1273 Tripterygium wilfordii HOM05D001391 ORTHO05D005432 3.0e-134 482.3 296 83.8
CSS0007431 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 1.1e-133 480.3 276 87.7
CSS0028231 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 1.1e-133 480.3 276 87.7
Potri.010G158700 Populus trichocarpa HOM05D001391 ORTHO05D005432 2.0e-133 479.6 295 81.0
PGSC0003DMG400028375 Solanum tuberosum HOM05D001391 ORTHO05D005432 2.6e-133 479.2 298 81.2
Sabra10G0120500 Salix brachista HOM05D001391 ORTHO05D005432 3.3e-133 478.8 297 81.5
CAN.G616.39 Capsicum annuum HOM05D001391 ORTHO05D005432 1.3e-132 476.9 300 81.0
Sopen05g007170 Solanum pennellii HOM05D001391 ORTHO05D005432 1.7e-132 476.5 301 80.4
Nitab4.5_0000231g0390 Nicotiana tabacum HOM05D001391 ORTHO05D005432 5.3e-131 471.5 303 82.2
Nitab4.5_0001487g0070 Nicotiana tabacum HOM05D001391 ORTHO05D005432 5.3e-131 471.5 303 82.2
Cc11_g12040 Coffea canephora HOM05D001391 ORTHO05D005432 7.0e-131 471.1 302 82.5
DCAR_007192 Daucus carota HOM05D001391 ORTHO05D005432 1.2e-130 470.3 298 82.6
Manes.01G028100 Manihot esculenta HOM05D001391 ORTHO05D005432 1.2e-130 470.3 295 79.7
QL03p071791 Quercus lobata HOM05D001391 ORTHO05D005432 3.5e-130 468.8 295 79.7
QL03p072323 Quercus lobata HOM05D001391 ORTHO05D005432 1.0e-129 467.2 295 78.6
QL03p071836 Quercus lobata HOM05D001391 ORTHO05D005432 3.8e-129 465.3 296 79.1
Actinidia16169 Actinidia chinensis HOM05D001391 ORTHO05D005432 8.5e-129 464.2 261 89.3
MD16G1061600 Malus domestica HOM05D001391 ORTHO05D005432 1.1e-128 463.8 298 78.9
Atru.chr11.1633 Acer truncatum HOM05D001391 ORTHO05D005432 3.2e-128 462.2 297 77.8
RcHm_v2.0_Chr4g0438441 Rosa chinensis HOM05D001391 ORTHO05D005432 3.2e-128 462.2 297 79.8
GSVIVG01012214001 Vitis vinifera HOM05D001391 ORTHO05D005432 4.2e-128 461.8 300 78.3
FvH4_4g30104 Fragaria vesca HOM05D001391 ORTHO05D005432 1.2e-127 460.3 298 79.2
FAN07G1596 Fragaria x ananassa HOM05D001391 ORTHO05D005432 1.2e-127 460.3 300 78.3
FAN17G2247 Fragaria x ananassa HOM05D001391 ORTHO05D002605 1.6e-127 459.9 299 78.3
Ciclev10031905m.g Citrus clementina HOM05D001391 ORTHO05D005432 4.7e-127 458.4 297 78.1
DCAR_030039 Daucus carota HOM05D001391 ORTHO05D005432 6.1e-127 458.0 297 79.8
Oeu048144.1 Olea europaea HOM05D001391 ORTHO05D005432 6.1e-127 458.0 257 88.3
QL03p072348 Quercus lobata HOM05D001391 ORTHO05D005432 6.1e-127 458.0 297 77.4
HanXRQChr15g0477081 Helianthus annuus HOM05D001391 ORTHO05D005432 1.4e-126 456.8 286 80.4
Prupe.1G286500 Prunus persica HOM05D001391 ORTHO05D005432 2.3e-126 456.1 299 78.6
QL03p071994 Quercus lobata HOM05D001391 ORTHO05D005432 2.3e-126 456.1 296 77.7
TAR629G1471 Trochodendron aralioides HOM05D001391 ORTHO05D005432 5.2e-126 454.9 296 77.7
TAR629G2660 Trochodendron aralioides HOM05D001391 ORTHO05D005432 5.2e-126 454.9 296 77.7
FAN22G1389 Fragaria x ananassa HOM05D001391 ORTHO05D005432 1.1e-125 453.8 296 78.0
QL03p072246 Quercus lobata HOM05D001391 ORTHO05D005432 1.1e-125 453.8 326 72.7
MELO3C011425.2 Cucumis melo HOM05D001391 ORTHO05D005432 2.0e-125 453.0 292 77.7
Sed0003297 Sechium edule HOM05D001391 ORTHO05D005432 2.0e-125 453.0 296 76.7
Glyma.20G025600 Glycine max HOM05D001391 ORTHO05D005432 4.4e-125 451.8 298 77.2
Lj4g0006249 Lotus japonicus HOM05D001391 ORTHO05D005432 4.4e-125 451.8 298 77.9
ECA246G4329 Erigeron canadensis HOM05D001391 ORTHO05D005432 5.7e-125 451.4 302 77.8
PGR102G1705 Punica granatum HOM05D001391 ORTHO05D005432 1.3e-124 450.3 264 84.1
Sed0027135 Sechium edule HOM05D001391 ORTHO05D005432 1.7e-124 449.9 292 76.7
QL06p022506 Quercus lobata HOM05D001391 ORTHO05D005432 2.2e-124 449.5 299 76.3
Eucgr.B03154 Eucalyptus grandis HOM05D001391 ORTHO05D005432 8.2e-124 447.6 273 81.0
HanXRQChr12g0375271 Helianthus annuus HOM05D001391 ORTHO05D005432 8.2e-124 447.6 300 77.3
MD13G1063100 Malus domestica HOM05D001391 ORTHO05D005432 1.1e-123 447.2 299 77.3
QL03p071709 Quercus lobata HOM05D001391 ORTHO05D005432 1.4e-123 446.8 300 76.3
VMungo0251G0716 Vigna mungo HOM05D001391 ORTHO05D005432 1.8e-123 446.4 298 76.5
Ca_18800_v3 Cicer arietinum L. HOM05D001391 ORTHO05D005432 2.7e-122 442.6 298 76.8
COL.COLO4_27891 Corchorus olitorius HOM05D001391 ORTHO05D005432 3.5e-122 442.2 306 74.2
arahy.Tifrunner.gnm1.ann1.52K398 Arachis hypogaea HOM05D001391 ORTHO05D005432 1.0e-121 440.7 274 81.4
ClCG08G010360 Citrullus lanatus HOM05D001391 ORTHO05D005432 1.0e-121 440.7 313 72.5
arahy.Tifrunner.gnm1.ann1.G55KBL Arachis hypogaea HOM05D001391 ORTHO05D005432 2.2e-121 439.5 272 82.0
Duzib248G0196 Durio zibethinus HOM05D001391 ORTHO05D005432 2.9e-121 439.1 276 79.0
Phvul.002G102100 Phaseolus vulgaris HOM05D001391 ORTHO05D005432 2.9e-121 439.1 296 76.0
Psat7g134560 Pisum sativum HOM05D001391 ORTHO05D005432 5.0e-121 438.3 300 75.7
Haze_11913 Corylus avellana HOM05D001391 ORTHO05D005432 6.5e-121 438.0 254 84.6
PSO017G5650 Papaver somniferum HOM05D001391 ORTHO05D005432 5.5e-120 434.9 302 74.2
Lalb_Chr05g0219941 Lupinus albus HOM05D001391 ORTHO05D005432 7.2e-120 434.5 299 74.9
THA.LOC104824058 Tarenaya hassleriana HOM05D001391 ORTHO05D005432 9.4e-120 434.1 296 74.7
Medtr4g083100 Medicago truncatula HOM05D001391 ORTHO05D005432 1.2e-119 433.7 300 75.3
PSO478G1327 Papaver somniferum HOM05D001391 ORTHO05D005432 1.6e-119 433.3 302 73.8
A09p24460 Brassica napus HOM05D001391 ORTHO05D005432 4.7e-119 431.8 297 74.1
BraA09t38039Z Brassica rapa HOM05D001391 ORTHO05D005432 4.7e-119 431.8 297 74.1
CANSAT64G0915 Cannabis sativa HOM05D001391 ORTHO05D005432 4.7e-119 431.8 271 77.5
BcaB07g30667 Brassica carinata HOM05D001391 ORTHO05D005432 1.4e-118 430.3 297 74.4
Thecc.02G331500 Theobroma cacao HOM05D001391 ORTHO05D005432 1.4e-118 430.3 256 82.0
Ah.02g126880 Amaranthus hybridus HOM05D001391 ORTHO05D005432 1.8e-118 429.9 300 73.0
QL03p071737 Quercus lobata HOM05D001391 ORTHO05D005432 1.8e-118 429.9 301 74.1
CDE05G0079 Ceratophyllum demersum HOM05D001391 ORTHO05D005432 2.3e-118 429.5 279 76.7
TPR.G34031 Trifolium pratense HOM05D001391 ORTHO05D005432 1.2e-117 427.2 298 73.8
THA.LOC104805193 Tarenaya hassleriana HOM05D001391 ORTHO05D005432 2.6e-117 426.0 298 75.2
Lsat_1_v5_gn_3_53800 Lactuca sativa HOM05D001391 ORTHO05D005432 4.4e-117 425.2 290 75.9
unitig_22.g6493 Utricularia gibba HOM05D001391 ORTHO05D005432 4.4e-117 425.2 304 72.7
BcaC04g21485 Brassica carinata HOM05D001391 ORTHO05D005432 5.7e-117 424.9 297 73.4
C09p31260 Brassica napus HOM05D001391 ORTHO05D005432 5.7e-117 424.9 297 73.4
BolC9t55982H Brassica oleracea HOM05D001391 ORTHO05D005432 5.7e-117 424.9 297 73.4
AL5G13280 Arabidopsis lyrata HOM05D001391 ORTHO05D005432 1.7e-116 423.3 297 72.7
Sp2g14420 Schrenkiella parvula HOM05D001391 ORTHO05D005432 2.2e-116 422.9 297 72.4
Aqoxy3G03632 Aquilegia oxysepala HOM05D001391 ORTHO05D005432 4.8e-116 421.8 276 76.8
CARHR145860 Cardamine hirsuta HOM05D001391 ORTHO05D005432 1.4e-115 420.2 297 72.1
AT2G03510 Arabidopsis thaliana HOM05D001391 ORTHO05D005432 1.8e-115 419.9 297 72.1
Carub.0005s0265 Capsella rubella HOM05D001391 ORTHO05D005432 2.4e-115 419.5 297 72.1
Thhalv10004477m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 2.4e-115 419.5 297 72.4
RcHm_v2.0_Chr4g0438461 Rosa chinensis HOM05D001391 ORTHO05D005432 3.1e-115 419.1 276 76.1
Peaxi162Scf00175g00121 Petunia axillaris HOM05D001391 ORTHO05D005432 9.1e-115 417.5 245 83.3
Aa31LG2G7090 Aethionema arabicum HOM05D001391 ORTHO05D005432 2.0e-114 416.4 296 71.6
PSO478G2440 Papaver somniferum HOM05D001391 ORTHO05D005432 2.7e-114 416.0 289 74.7
TAR622G0883 Trochodendron aralioides HOM05D001391 ORTHO05D005432 2.7e-114 416.0 322 69.9
AUR62003104 Chenopodium quinoa HOM05D001391 ORTHO05D005432 4.5e-114 415.2 264 77.7
EL10Ac6g14993 Beta vulgaris HOM05D001391 ORTHO05D005432 1.0e-113 414.1 257 79.4
BcaC03g17224 Brassica carinata HOM05D001391 ORTHO05D005432 1.0e-113 414.1 295 71.9
C02p51560 Brassica napus HOM05D001391 ORTHO05D005432 1.0e-113 414.1 295 71.9
BolC2t11243H Brassica oleracea HOM05D001391 ORTHO05D005432 1.0e-113 414.1 295 71.9
vmacro01316 Vaccinium macrocarpon HOM05D001391 ORTHO05D005432 3.8e-113 412.1 310 72.9
Zm00001eb393170 Zea mays HOM05D001391 ORTHO05D005432 8.5e-113 411.0 291 73.9
Gorai.013G093700 Gossypium raimondii HOM05D001391 ORTHO05D005432 1.5e-112 410.2 298 70.1
ATR0064G010 Amborella trichopoda HOM05D001391 ORTHO05D005432 5.5e-112 408.3 243 81.9
Gohir.D13G081800 Gossypium hirsutum HOM05D001391 ORTHO05D005432 5.2e-110 401.7 298 69.1
CsaV3_6G032550 Cucumis sativus L. HOM05D001391 ORTHO05D005432 2.0e-109 399.8 292 70.9
Sabra08G0071900 Salix brachista HOM05D001391 ORTHO05D005432 1.1e-107 394.0 313 68.7
Migut.L01194 Erythranthe guttata HOM05D001391 ORTHO05D005432 1.8e-107 393.3 260 75.4
HPP92_020445 Vanilla planifolia HOM05D001391 ORTHO05D005432 1.8e-107 393.3 258 75.2
Sc11g0002420 Simmondsia chinensis HOM05D001391 ORTHO05D005432 2.7e-106 389.4 295 69.5
Eucgr.B03155 Eucalyptus grandis HOM05D001391 ORTHO05D005432 5.9e-106 388.3 242 78.9
CsaV3_6G033630 Cucumis sativus L. HOM05D001391 ORTHO05D005432 1.0e-105 387.5 313 66.1
Lj6C779T14 Lonicera japonica HOM05D001391 ORTHO05D005432 1.3e-105 387.1 349 63.3
Zm00001eb020150 Zea mays HOM05D001391 ORTHO05D005432 6.6e-105 384.8 291 68.4
QL03p071961 Quercus lobata HOM05D001391 ORTHO05D005432 2.1e-103 379.8 297 67.3
SMO364G0146 Selaginella moellendorffii HOM05D001391 ORTHO05D005432 4.7e-103 378.6 245 76.3
Hund05837 Selenicereus undatus HOM05D001391 ORTHO05D005432 8.0e-103 377.9 257 74.7
Pp3c1_8060 Physcomitrium patens HOM05D001391 ORTHO05D005432 1.5e-101 373.6 283 66.8
Pp3c2_37740 Physcomitrium patens HOM05D001391 ORTHO05D005432 2.0e-98 363.2 290 65.2
AagrBONN_evm.TU.Sc2ySwM_228.3454 Anthoceros agrestis HOM05D001391 ORTHO05D005432 3.0e-97 359.4 295 61.0
Mapoly0041s0056 Marchantia polymorpha HOM05D001391 ORTHO05D005432 4.3e-96 355.5 267 66.3
Thecc.02G331800 Theobroma cacao HOM05D001391 ORTHO05D005432 2.8e-95 352.8 229 76.0
Cpa.g.sc1.121 Carica papaya HOM05D001391 ORTHO05D005432 2.3e-94 349.7 297 65.7
Glyma.07G225600 Glycine max HOM05D001391 ORTHO05D005432 8.9e-94 347.8 214 80.8
CBR_g22084 Chara braunii HOM05D001391 ORTHO05D005432 2.6e-93 346.3 242 69.8
CDE02G0606 Ceratophyllum demersum HOM05D001391 ORTHO05D005432 3.4e-93 345.9 239 73.2
Gohir.A13G082200 Gossypium hirsutum HOM05D001391 ORTHO05D005432 5.4e-91 338.6 227 74.0
Nn4g23419 Nelumbo nucifera HOM05D001391 ORTHO05D005432 2.1e-87 326.6 295 61.4
Thhalv10022792m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 1.1e-86 324.3 256 66.0
Thhalv10022979m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 1.1e-86 324.3 256 66.0
Rhsim12G0074900 Rhododendron simsii HOM05D001391 ORTHO05D005432 3.4e-85 319.3 245 69.8
Solyc05g012340.4 Solanum lycopersicum HOM05D001391 ORTHO05D005432 4.6e-82 308.9 182 86.3
AUR62007921 Chenopodium quinoa HOM05D001391 ORTHO05D005432 1.3e-81 307.4 260 61.9
MBI16_g24179_MAGBIO Magnolia biondii HOM05D001391 ORTHO05D005432 2.1e-79 300.1 270 61.1
Eucgr.B03159 Eucalyptus grandis HOM05D001391 ORTHO05D005432 8.4e-76 288.1 197 74.1
CSS0036366 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 2.3e-65 253.4 179 74.9
Nn3g17437 Nelumbo nucifera HOM05D001391 ORTHO05D005432 2.5e-64 250.0 295 50.2
Hund25181 Selenicereus undatus HOM05D001391 ORTHO05D005432 8.1e-63 245.0 174 70.1
CSS0025210 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 9.3e-51 204.9 125 82.4
Gohir.D12G164650 Gossypium hirsutum HOM05D001391 ORTHO05D005432 1.1e-48 198.0 212 54.7
HanXRQChr08g0223901 Helianthus annuus HOM05D001391 ORTHO05D005432 9.0e-46 188.3 125 80.8
Gorai.008G177400 Gossypium raimondii HOM05D001391 ORTHO05D005432 4.2e-35 152.9 82 82.9
Gorai.008G177300 Gossypium raimondii HOM05D001391 ORTHO05D005432 7.2e-35 152.1 117 69.2
QL01p050908 Quercus lobata HOM05D001391 ORTHO05D005432 1.6e-34 151.0 141 56.0
QL03p071882 Quercus lobata HOM05D001391 ORTHO05D005432 5.3e-30 136.0 117 65.8
Mapoly0004s0019 Marchantia polymorpha HOM05D001391 ORTHO05D005432 2.1e-26 124.0 244 30.7
BcaB07g30295 Brassica carinata HOM05D001391 ORTHO05D005432 5.0e-20 102.8 80 72.5
Os03g0421400 Oryza sativa ssp. japonica HOM05D001391 ORTHO05D005432 7.2e-19 99.0 90 58.9
SEGI_10839 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 2.7e-18 97.1 73 65.8
SEGI_38290 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 3.0e-17 93.6 56 71.4
SEGI_41081 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 1.8e-14 84.3 68 66.2
SEGI_06703 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 2.4e-14 84.0 68 64.7
MD16G1164500 Malus domestica HOM05D001391 ORTHO05D005432 4.1e-14 83.2 52 71.2
QL01p050911 Quercus lobata HOM05D001391 ORTHO05D005432 4.1e-14 83.2 73 65.8
Hma1.2p1_3404F.1_g335810 Hydrangea macrophylla HOM05D001391 ORTHO05D005432 3.5e-13 80.1 65 76.9
SEGI_37700 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 2.5e-11 73.9 59 64.4
Hma1.2p1_1826F.1_g304410 Hydrangea macrophylla HOM05D001391 ORTHO05D005432 5.7e-08 62.8 68 58.8


User provided reference genes

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