Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 2.1e-92 342.4 181 100.0
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 5.0e-78 294.7 194 79.9
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 9.4e-77 290.4 174 86.2
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.2e-76 290.0 174 82.8
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 1.2e-76 290.0 175 85.1
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 8.8e-75 283.9 175 82.3
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 2.6e-74 282.3 175 81.7
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 4.4e-74 281.6 175 82.3
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 1.7e-73 279.6 175 84.0
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 1.4e-72 276.6 175 79.4
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 3.5e-71 271.9 175 82.3
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 7.7e-71 270.8 175 79.4
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 1.3e-70 270.0 175 80.0
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 1.3e-70 270.0 175 78.9
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 1.7e-70 269.6 175 77.1
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 2.9e-70 268.9 175 77.1
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 5.0e-70 268.1 175 76.6
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 1.1e-69 266.9 174 77.6
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 2.5e-69 265.8 175 77.7
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 3.2e-69 265.4 175 76.0
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 7.2e-69 264.2 175 76.6
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 1.2e-68 263.5 175 77.1
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 1.6e-68 263.1 175 74.9
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 2.1e-68 262.7 175 73.1
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 2.1e-68 262.7 175 76.0
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 4.7e-68 261.5 184 74.5
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 4.7e-68 261.5 175 74.3
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 4.7e-68 261.5 175 74.9
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 1.4e-67 260.0 175 77.1
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 1.4e-67 260.0 175 75.4
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 1.4e-67 260.0 175 75.4
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 1.8e-67 259.6 175 74.3
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 1.8e-67 259.6 174 75.3
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 3.0e-67 258.8 175 72.6
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 8.8e-67 257.3 175 73.7
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 8.8e-67 257.3 175 74.3
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 1.1e-66 256.9 175 73.7
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 1.5e-66 256.5 175 73.7
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 2.6e-66 255.8 175 74.3
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 2.6e-66 255.8 175 73.7
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 3.3e-66 255.4 175 75.4
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 4.4e-66 255.0 175 71.4
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 5.7e-66 254.6 175 73.1
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 5.7e-66 254.6 175 74.3
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 9.7e-66 253.8 175 73.7
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 1.7e-65 253.1 175 74.9
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 2.2e-65 252.7 175 73.1
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 4.8e-65 251.5 175 72.6
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 6.3e-65 251.1 175 72.0
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 6.3e-65 251.1 174 72.4
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 8.2e-65 250.8 175 71.4
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.4e-64 249.2 175 73.1
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 2.4e-64 249.2 175 72.6
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 4.1e-64 248.4 175 72.6
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 1.2e-63 246.9 175 69.7
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 3.5e-63 245.4 175 69.7
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 4.5e-63 245.0 175 70.9
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 7.7e-63 244.2 175 69.7
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 8.5e-62 240.7 199 64.3
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 1.9e-61 239.6 175 72.6
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 1.9e-61 239.6 175 72.6
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 9.4e-61 237.3 175 68.0
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 2.1e-60 236.1 175 68.6
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 3.6e-60 235.3 179 69.8
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 4.7e-60 235.0 173 66.5
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 6.1e-60 234.6 173 67.6
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 6.7e-59 231.1 181 69.1
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 8.8e-59 230.7 175 68.0
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 8.8e-59 230.7 175 65.1
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 3.3e-58 228.8 175 69.1
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 3.7e-57 225.3 138 82.6
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 4.8e-57 224.9 138 81.9
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 2.4e-56 222.6 141 80.9
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 7.0e-56 221.1 173 64.7
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 9.1e-56 220.7 193 64.2
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 1.6e-55 219.9 250 54.4
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 7.7e-55 217.6 174 61.5
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 7.7e-55 217.6 175 65.1
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 2.9e-54 215.7 219 57.5
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 4.2e-53 211.8 221 57.0
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.2e-52 210.3 222 56.8
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 4.7e-52 208.4 133 79.7
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 1.8e-51 206.5 136 77.2
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 3.0e-51 205.7 226 55.8
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 1.5e-50 203.4 175 60.6
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 2.6e-50 202.6 175 60.6
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 5.7e-50 201.4 135 74.1
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 1.3e-49 200.3 175 61.7
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 4.8e-49 198.4 138 71.0
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 4.8e-49 198.4 138 71.0
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 1.1e-48 197.2 136 73.5
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 4.1e-48 195.3 191 57.6
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 5.4e-48 194.9 175 59.4
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 1.5e-45 186.8 138 68.1
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 9.5e-45 184.1 196 55.6
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 2.8e-44 182.6 138 69.6
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 1.0e-43 180.6 143 62.9
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 1.7e-41 173.3 107 80.4
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 4.1e-40 168.7 102 83.3
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 5.0e-38 161.8 101 80.2
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 9.5e-37 157.5 174 44.8
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 5.8e-34 148.3 135 60.7
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 5.8e-34 148.3 135 60.7
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 2.9e-33 146.0 116 64.7
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 6.4e-33 144.8 140 57.1
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 1.3e-30 137.1 98 71.4
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 5.6e-29 131.7 150 45.3
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 4.7e-28 128.6 103 64.1
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 1.5e-26 123.6 81 72.8
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 7.0e-24 114.8 63 88.9
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 7.8e-23 111.3 63 85.7
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 1.4e-19 100.5 135 45.2
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 1.5e-18 97.1 155 36.8
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 7.1e-16 88.2 48 89.6
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 7.1e-16 88.2 69 66.7
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 3.5e-15 85.9 151 31.8
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 3.0e-14 82.8 172 30.8
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 1.7e-09 67.0 53 60.4
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 9.3e-08 61.2 33 75.8
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 2.1e-07 60.1 34 79.4


User provided reference genes

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