Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 1.8e-184 649.0 317 100.0
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 9.1e-152 540.4 314 83.8
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 1.0e-150 537.0 311 85.5
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 2.0e-146 522.7 343 77.8
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 7.7e-143 510.8 310 80.3
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 3.8e-142 508.4 313 80.5
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 3.6e-140 501.9 313 77.6
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 4.0e-139 498.4 309 79.6
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 8.8e-139 497.3 312 77.2
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 1.5e-138 496.5 312 77.2
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 5.7e-138 494.6 312 76.6
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.7e-137 493.0 312 76.6
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 2.2e-137 492.7 318 76.1
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 2.8e-137 492.3 310 77.1
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 1.1e-136 490.3 372 68.5
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 1.4e-136 490.0 311 76.5
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.8e-136 489.6 312 77.2
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 3.1e-136 488.8 312 77.2
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 7.0e-136 487.6 367 69.5
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 9.2e-136 487.3 314 76.4
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 3.5e-135 485.3 313 78.0
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 2.9e-134 482.3 312 76.3
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 1.9e-133 479.6 310 77.4
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 9.5e-133 477.2 313 76.7
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 6.1e-132 474.6 313 74.4
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 1.4e-131 473.4 299 77.6
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 8.9e-131 470.7 311 74.9
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 3.4e-130 468.8 312 73.7
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 5.7e-130 468.0 306 76.1
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 4.9e-129 464.9 312 74.4
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 1.1e-128 463.8 305 73.4
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 7.0e-128 461.1 310 73.2
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 1.2e-127 460.3 312 72.4
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 5.9e-127 458.0 311 72.7
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 7.8e-127 457.6 260 83.5
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 1.7e-126 456.4 311 73.0
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 3.9e-126 455.3 264 80.3
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 5.0e-126 454.9 310 74.2
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 8.6e-126 454.1 312 70.5
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 1.5e-125 453.4 324 72.2
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 1.9e-125 453.0 261 80.1
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 2.5e-125 452.6 315 71.1
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 2.5e-125 452.6 316 71.2
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 4.3e-125 451.8 313 72.2
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 4.3e-125 451.8 312 72.8
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 9.5e-125 450.7 310 73.5
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 1.2e-124 450.3 314 71.3
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 2.1e-124 449.5 314 73.6
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 6.2e-124 448.0 324 71.3
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 1.4e-123 446.8 301 73.1
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 1.8e-123 446.4 315 70.5
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 1.8e-123 446.4 324 70.7
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 8.9e-123 444.1 272 78.3
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 1.5e-122 443.4 271 79.7
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 2.0e-122 443.0 317 70.0
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 4.9e-121 438.3 310 69.0
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 2.7e-119 432.6 256 77.7
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 3.5e-119 432.2 337 65.9
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 7.8e-119 431.0 300 71.3
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 7.8e-119 431.0 312 69.9
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 3.0e-118 429.1 312 68.6
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 3.9e-118 428.7 291 71.1
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 6.6e-118 427.9 300 69.7
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 6.6e-118 427.9 311 69.1
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 8.6e-118 427.6 306 69.0
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 1.5e-117 426.8 306 69.0
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 3.3e-117 425.6 313 69.0
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 5.6e-117 424.9 306 68.3
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 5.6e-117 424.9 295 70.8
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 7.3e-117 424.5 313 68.4
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 7.3e-117 424.5 313 68.7
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 9.5e-117 424.1 319 66.8
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 1.6e-116 423.3 261 75.9
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 2.8e-116 422.5 313 67.4
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 3.6e-116 422.2 283 72.8
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 4.7e-116 421.8 315 69.5
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 1.4e-115 420.2 320 66.6
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 3.1e-115 419.1 311 67.5
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 5.2e-115 418.3 294 69.7
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 8.9e-115 417.5 307 66.8
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 8.9e-115 417.5 316 66.8
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 1.5e-114 416.8 267 74.2
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 2.0e-114 416.4 305 68.5
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 1.7e-113 413.3 270 73.3
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 8.6e-110 401.0 256 76.6
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 2.6e-106 389.4 303 63.7
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 2.9e-105 386.0 389 53.0
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 4.9e-105 385.2 299 64.2
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 3.2e-104 382.5 312 65.4
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 1.7e-102 376.7 235 73.2
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 1.9e-101 373.2 312 62.2
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 8.1e-100 367.9 296 64.2
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 1.2e-95 354.0 312 59.0
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 2.7e-87 326.2 251 58.6
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 7.9e-87 324.7 242 60.7
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 1.3e-86 323.9 280 57.1
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 8.7e-86 321.2 298 59.1
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 2.1e-84 316.6 249 63.1
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 1.5e-82 310.5 322 54.7
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 3.3e-77 292.7 313 47.6
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 4.0e-75 285.8 256 57.4
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 5.3e-75 285.4 157 80.3
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 8.4e-73 278.1 150 88.0
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 3.5e-71 272.7 226 61.9
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 7.2e-64 248.4 164 74.4
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 7.9e-63 245.0 134 84.3
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 1.5e-58 230.7 138 76.8
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 1.5e-53 214.2 244 43.9
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 3.8e-49 199.5 137 63.5
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 6.3e-44 182.2 256 42.6
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 4.1e-43 179.5 116 75.9
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 2.2e-33 147.1 273 35.9
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 7.2e-32 142.1 292 28.8
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 8.0e-31 138.7 273 33.3
Actinidia38386 Actinidia chinensis HOM05D004993 ORTHO05D008532 1.6e-23 114.4 84 70.2
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 6.6e-17 92.4 100 47.0
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 7.3e-16 89.0 53 69.8


User provided reference genes

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