Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv16422 Davidia involucrata HOM05D006886 ORTHO05D008494 4.9e-76 287.7 147 100.0
Dinv03403 Davidia involucrata HOM05D006886 ORTHO05D008494 3.1e-54 215.3 153 75.2
Duzib168G1824 Durio zibethinus HOM05D006886 ORTHO05D008494 3.9e-49 198.4 123 81.3
Actinidia22280 Actinidia chinensis HOM05D006886 ORTHO05D008494 5.1e-49 198.0 121 80.2
Rhsim02G0217500 Rhododendron simsii HOM05D006886 ORTHO05D008494 7.4e-48 194.1 124 81.5
CiPaw.07G233000 Carya illinoinensis HOM05D006886 ORTHO05D008494 9.7e-48 193.7 111 85.6
TAR625G1053 Trochodendron aralioides HOM05D006886 ORTHO05D008494 9.7e-48 193.7 121 80.2
CSS0014970 Camellia sinensis var. sinensis HOM05D006886 ORTHO05D008494 1.3e-47 193.4 121 80.2
Lsat_1_v5_gn_3_22560 Lactuca sativa HOM05D006886 ORTHO05D008494 1.8e-46 189.5 117 82.1
Sopen08g002580 Solanum pennellii HOM05D006886 ORTHO05D008494 2.0e-45 186.0 140 67.9
Cfa013010 Carpinus fangiana HOM05D006886 ORTHO05D008494 2.6e-45 185.7 121 77.7
Thecc.09G013300 Theobroma cacao HOM05D006886 ORTHO05D008494 2.6e-45 185.7 121 76.0
Haze_21375 Corylus avellana HOM05D006886 ORTHO05D008494 4.5e-45 184.9 121 76.9
PGSC0003DMG400026287 Solanum tuberosum HOM05D006886 ORTHO05D008494 5.9e-45 184.5 135 69.6
QL02p018037 Quercus lobata HOM05D006886 ORTHO05D008494 1.7e-44 183.0 118 78.0
Gohir.A07G033700 Gossypium hirsutum HOM05D006886 ORTHO05D008494 2.2e-44 182.6 123 76.4
Nitab4.5_0000264g0070 Nicotiana tabacum HOM05D006886 ORTHO05D008494 2.2e-44 182.6 152 63.8
COL.COLO4_18973 Corchorus olitorius HOM05D006886 ORTHO05D008494 2.9e-44 182.2 140 68.6
Solyc08g006630.3 Solanum lycopersicum HOM05D006886 ORTHO05D008494 6.5e-44 181.0 140 66.4
Actinidia14002 Actinidia chinensis HOM05D006886 ORTHO05D008494 1.4e-43 179.9 134 68.7
Duzib187G0928 Durio zibethinus HOM05D006886 ORTHO05D008494 2.5e-43 179.1 121 74.4
Nn2g12469 Nelumbo nucifera HOM05D006886 ORTHO05D008494 2.5e-43 179.1 131 67.9
Gorai.001G038900 Gossypium raimondii HOM05D006886 ORTHO05D008494 5.5e-43 177.9 123 75.6
ECA246G1281 Erigeron canadensis HOM05D006886 ORTHO05D008494 7.2e-43 177.6 134 67.9
Hma1.2p1_0355F.1_g133950 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 9.4e-43 177.2 121 74.4
Cpa.g.sc148.45 Carica papaya HOM05D006886 ORTHO05D008494 2.1e-42 176.0 118 72.0
Cc08_g07710 Coffea canephora HOM05D006886 ORTHO05D008494 1.0e-41 173.7 143 64.3
Oeu010292.1 Olea europaea HOM05D006886 ORTHO05D008494 1.4e-41 173.3 146 61.6
PSO063G3428 Papaver somniferum HOM05D006886 ORTHO05D008494 1.4e-41 173.3 121 69.4
CAN.G285.18 Capsicum annuum HOM05D006886 ORTHO05D008494 2.3e-41 172.6 145 63.4
HanXRQChr17g0536351 Helianthus annuus HOM05D006886 ORTHO05D008494 2.3e-41 172.6 118 72.9
MD08G1052100 Malus domestica HOM05D006886 ORTHO05D008494 3.9e-41 171.8 113 74.3
Lj7A737T48 Lonicera japonica HOM05D006886 ORTHO05D008494 6.7e-41 171.0 110 74.5
Nitab4.5_0001362g0050 Nicotiana tabacum HOM05D006886 ORTHO05D008494 8.8e-41 170.6 165 60.6
RcHm_v2.0_Chr6g0299191 Rosa chinensis HOM05D006886 ORTHO05D008494 1.5e-40 169.9 124 66.9
SGA_v2.0_scaffold27G11627 Striga asiatica HOM05D006886 ORTHO05D008494 4.4e-40 168.3 111 73.9
MSTRG.11790 Avicennia marina HOM05D006886 ORTHO05D008494 5.7e-40 167.9 111 73.0
Eucgr.F04206 Eucalyptus grandis HOM05D006886 ORTHO05D008494 5.7e-40 167.9 119 64.7
TWI63G0132 Tripterygium wilfordii HOM05D006886 ORTHO05D008494 5.7e-40 167.9 121 67.8
vmacro11273 Vaccinium macrocarpon HOM05D006886 ORTHO05D008494 7.4e-40 167.5 177 57.6
PSO782G0555 Papaver somniferum HOM05D006886 ORTHO05D008494 9.7e-40 167.2 121 66.9
Prupe.1G396800 Prunus persica HOM05D006886 ORTHO05D008494 1.3e-39 166.8 135 63.0
FvH4_2g41341 Fragaria vesca HOM05D006886 ORTHO05D008494 2.2e-39 166.0 111 71.2
FAN27G2382 Fragaria x ananassa HOM05D006886 ORTHO05D008494 2.2e-39 166.0 125 64.8
Potri.018G016300 Populus trichocarpa HOM05D006886 ORTHO05D008494 2.2e-39 166.0 134 63.4
MD15G1043400 Malus domestica HOM05D006886 ORTHO05D008494 2.8e-39 165.6 134 64.2
Manes.16G132100 Manihot esculenta HOM05D006886 ORTHO05D008494 2.8e-39 165.6 121 71.1
THA.LOC104819952 Tarenaya hassleriana HOM05D006886 ORTHO05D008494 2.8e-39 165.6 127 63.0
FAN15G0524 Fragaria x ananassa HOM05D006886 ORTHO05D008494 4.8e-39 164.9 111 70.3
Sabra18G0019800 Salix brachista HOM05D006886 ORTHO05D008494 4.8e-39 164.9 121 68.6
AUR62024781 Chenopodium quinoa HOM05D006886 ORTHO05D008494 6.3e-39 164.5 111 69.4
CsaV3_4G036380 Cucumis sativus L. HOM05D006886 ORTHO05D008494 6.3e-39 164.5 121 66.9
EL10Ac2g02461 Beta vulgaris HOM05D006886 ORTHO05D008494 8.2e-39 164.1 124 62.9
Lj5g0011023 Lotus japonicus HOM05D006886 ORTHO05D008494 3.1e-38 162.2 124 66.1
Hund25607 Selenicereus undatus HOM05D006886 ORTHO05D008494 7.0e-38 161.0 137 59.1
Sed0006692 Sechium edule HOM05D006886 ORTHO05D008494 9.1e-38 160.6 121 66.9
Ciclev10010834m.g Citrus clementina HOM05D006886 ORTHO05D008494 1.6e-37 159.8 121 66.1
PGR042G1056 Punica granatum HOM05D006886 ORTHO05D008494 1.6e-37 159.8 110 70.0
Aqoxy7G03293 Aquilegia oxysepala HOM05D006886 ORTHO05D008494 7.7e-37 157.5 121 63.6
ClCG05G016110 Citrullus lanatus HOM05D006886 ORTHO05D008494 2.2e-36 156.0 149 58.4
Glyma.14G104300 Glycine max HOM05D006886 ORTHO05D008494 2.2e-36 156.0 126 63.5
Glyma.17G221700 Glycine max HOM05D006886 ORTHO05D008494 2.2e-36 156.0 134 62.7
arahy.Tifrunner.gnm1.ann1.5WK6RP Arachis hypogaea HOM05D006886 ORTHO05D008494 3.8e-36 155.2 131 61.1
arahy.Tifrunner.gnm1.ann1.QF2P07 Arachis hypogaea HOM05D006886 ORTHO05D008494 3.8e-36 155.2 131 61.1
Ah.15g098740 Amaranthus hybridus HOM05D006886 ORTHO05D008494 5.0e-36 154.8 119 63.0
Migut.A00389 Erythranthe guttata HOM05D006886 ORTHO05D008494 5.0e-36 154.8 110 70.0
TPR.G38843 Trifolium pratense HOM05D006886 ORTHO05D008494 5.0e-36 154.8 126 61.9
CANSAT25G2371 Cannabis sativa HOM05D006886 ORTHO05D008494 3.2e-35 152.1 113 65.5
MBI15_g26075_MAGBIO Magnolia biondii HOM05D006886 ORTHO05D008494 3.2e-35 152.1 153 58.2
CDE04G0647 Ceratophyllum demersum HOM05D006886 ORTHO05D008494 4.2e-35 151.8 108 66.7
Sc17g0004260 Simmondsia chinensis HOM05D006886 ORTHO05D008494 4.2e-35 151.8 135 57.8
Ca_13077_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 9.4e-35 150.6 152 54.6
Medtr1g013640 Medicago truncatula HOM05D006886 ORTHO05D008494 9.4e-35 150.6 131 60.3
AL4G16050 Arabidopsis lyrata HOM05D006886 ORTHO05D008494 1.6e-34 149.8 128 59.4
Phvul.001G042700 Phaseolus vulgaris HOM05D006886 ORTHO05D008494 1.6e-34 149.8 134 59.0
AUR62032440 Chenopodium quinoa HOM05D006886 ORTHO05D008494 2.1e-34 149.4 133 57.1
ATR0580G343 Amborella trichopoda HOM05D006886 ORTHO05D008494 2.7e-34 149.1 109 66.1
VMungo0647G1481 Vigna mungo HOM05D006886 ORTHO05D008494 2.7e-34 149.1 115 65.2
AT2G24970 Arabidopsis thaliana HOM05D006886 ORTHO05D008494 1.8e-33 146.4 127 57.5
A09p55990 Brassica napus HOM05D006886 ORTHO05D008494 1.8e-33 146.4 143 51.7
A09p56060 Brassica napus HOM05D006886 ORTHO05D008494 1.8e-33 146.4 143 51.7
BraA09t41001Z Brassica rapa HOM05D006886 ORTHO05D008494 1.8e-33 146.4 143 51.7
Atru.chr7.2575 Acer truncatum HOM05D006886 ORTHO05D008494 2.3e-33 146.0 121 58.7
Sp4g03960 Schrenkiella parvula HOM05D006886 ORTHO05D008494 5.2e-33 144.8 136 52.9
SHI21090 Sapria himalayana HOM05D006886 ORTHO05D008494 8.8e-33 144.1 111 63.1
Carub.0004s0454 Capsella rubella HOM05D006886 ORTHO05D008494 4.4e-32 141.7 115 58.3
Lalb_Chr14g0361721 Lupinus albus HOM05D006886 ORTHO05D008494 7.5e-32 141.0 122 56.6
Thhalv10000363m.g Eutrema salsugineum HOM05D006886 ORTHO05D008494 3.7e-31 138.7 133 52.6
Aa31sc83G60 Aethionema arabicum HOM05D006886 ORTHO05D008494 4.8e-31 138.3 110 61.8
CARHR116750 Cardamine hirsuta HOM05D006886 ORTHO05D008494 6.3e-31 137.9 115 58.3
C08p38980 Brassica napus HOM05D006886 ORTHO05D008494 3.1e-30 135.6 127 52.8
Psat6g024960 Pisum sativum HOM05D006886 ORTHO05D008494 2.9e-28 129.0 115 55.7
RcHm_v2.0_Chr7g0186961 Rosa chinensis HOM05D006886 ORTHO05D008494 8.5e-28 127.5 86 72.1
BcaC07g40900 Brassica carinata HOM05D006886 ORTHO05D008494 2.7e-26 122.5 130 49.2
BolC8t51472H Brassica oleracea HOM05D006886 ORTHO05D008494 2.7e-26 122.5 130 49.2
Gohir.D07G037233 Gossypium hirsutum HOM05D006886 ORTHO05D008494 2.7e-26 122.5 83 78.3
MELO3C032323.2 Cucumis melo HOM05D006886 ORTHO05D008494 6.8e-25 117.9 79 77.2
GSVIVG01036003001 Vitis vinifera HOM05D006886 ORTHO05D008494 8.8e-25 117.5 73 78.1
Cfa001083 Carpinus fangiana HOM05D006886 ORTHO05D008494 5.7e-24 114.8 121 53.7
Peaxi162Scf00045g01941 Petunia axillaris HOM05D006886 ORTHO05D008494 7.5e-24 114.4 140 47.1
Hma1.2p1_0355F.1_g133940 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 1.1e-22 110.5 80 70.0
Pp3c17_11010 Physcomitrium patens HOM05D006886 ORTHO05D008494 1.1e-22 110.5 129 45.0
AagrBONN_evm.TU.Sc2ySwM_344.4138 Anthoceros agrestis HOM05D006886 ORTHO05D008494 5.9e-21 104.8 124 41.9
MD05G1059000 Malus domestica HOM05D006886 ORTHO05D008494 1.0e-20 104.0 70 72.9
Zm00001eb192560 Zea mays HOM05D006886 ORTHO05D008494 1.0e-20 104.0 111 43.2
Pp3c14_9080 Physcomitrium patens HOM05D006886 ORTHO05D008494 1.7e-20 103.2 112 43.8
BcaB08g35125 Brassica carinata HOM05D006886 ORTHO05D008494 2.9e-20 102.4 99 50.5
Os01g0766400 Oryza sativa ssp. japonica HOM05D006886 ORTHO05D008494 2.9e-20 102.4 111 45.9
Mapoly0034s0101 Marchantia polymorpha HOM05D006886 ORTHO05D008494 3.0e-17 92.4 118 37.3
Cfa023326 Carpinus fangiana HOM05D006886 ORTHO05D008494 5.2e-17 91.7 74 64.9
CAN.G285.15 Capsicum annuum HOM05D006886 ORTHO05D008494 1.6e-10 70.1 48 70.8
GSVIVG01036001001 Vitis vinifera HOM05D006886 ORTHO05D008494 2.8e-10 69.3 55 60.0
Ca_13745_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 3.1e-09 65.9 56 60.7
Cre03.g201500 Chlamydomonas reinhardtii HOM05D006886 ORTHO05D008494 2.2e-07 59.7 129 27.1
SalBow4G1854 Salvia bowleyana HOM05D006886 ORTHO05D008494 2.9e-07 59.3 44 65.9
Ca_06796_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 3.7e-07 58.9 49 61.2
Actinidia10535 Actinidia chinensis HOM05D040481 ORTHO05D008494 1.9e-06 56.6 32 87.5
MELO3C032324.2 Cucumis melo HOM05D006886 ORTHO05D008494 4.1e-06 55.5 42 54.8


User provided reference genes

Program Settings