Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv16352 Davidia involucrata HOM05D002559 ORTHO05D007687 2.6e-83 312.0 156 100.0
Hma1.2p1_0124F.1_g058260 Hydrangea macrophylla HOM05D002559 ORTHO05D007687 3.2e-17 92.4 93 59.1
Dinv24051 Davidia involucrata HOM05D002559 ORTHO05D007687 5.5e-17 91.7 93 57.0
TAR633G0789 Trochodendron aralioides HOM05D002559 ORTHO05D007687 5.5e-17 91.7 113 48.7
CSS0017634 Camellia sinensis var. sinensis HOM05D002559 ORTHO05D007687 1.8e-15 86.7 93 53.8
MBI19_g17432_MAGBIO Magnolia biondii HOM05D002559 ORTHO05D007687 2.3e-15 86.3 92 54.3
Hund24818 Selenicereus undatus HOM05D002559 ORTHO05D007687 2.3e-15 86.3 93 52.7
Actinidia22059 Actinidia chinensis HOM05D002559 ORTHO05D007687 3.0e-15 85.9 94 52.1
Nn7g35948 Nelumbo nucifera HOM05D002559 ORTHO05D007687 8.8e-15 84.3 93 52.7
MSTRG.6495 Avicennia marina HOM05D002559 ORTHO05D007687 1.1e-14 84.0 94 51.1
Cc06_g15580 Coffea canephora HOM05D002559 ORTHO05D007687 1.5e-14 83.6 131 42.7
PGR142G0770 Punica granatum HOM05D002559 ORTHO05D007687 3.3e-14 82.4 118 43.2
DCAR_009691 Daucus carota HOM05D002559 ORTHO05D007687 4.4e-14 82.0 93 51.6
Prupe.7G082900 Prunus persica HOM05D002559 ORTHO05D007687 4.4e-14 82.0 93 50.5
GSVIVG01033456001 Vitis vinifera HOM05D002559 ORTHO05D007687 4.4e-14 82.0 93 49.5
arahy.Tifrunner.gnm1.ann1.90N86S Arachis hypogaea HOM05D002559 ORTHO05D007687 5.7e-14 81.6 113 44.2
HanXRQChr14g0438201 Helianthus annuus HOM05D002559 ORTHO05D007687 5.7e-14 81.6 93 50.5
Solyc01g099730.3 Solanum lycopersicum HOM05D002559 ORTHO05D007687 5.7e-14 81.6 93 51.6
arahy.Tifrunner.gnm1.ann1.75K7CQ Arachis hypogaea HOM05D002559 ORTHO05D007687 7.4e-14 81.3 93 50.5
Migut.J01857 Erythranthe guttata HOM05D002559 ORTHO05D007687 7.4e-14 81.3 112 44.6
Lsat_1_v5_gn_2_56540 Lactuca sativa HOM05D002559 ORTHO05D007687 7.4e-14 81.3 93 50.5
Manes.08G041600 Manihot esculenta HOM05D002559 ORTHO05D007687 7.4e-14 81.3 93 50.5
Sopen01g043250 Solanum pennellii HOM05D002559 ORTHO05D007687 9.7e-14 80.9 92 52.2
Solyc09g065930.4 Solanum lycopersicum HOM05D002559 ORTHO05D007687 1.7e-13 80.1 93 50.5
PGSC0003DMG400007534 Solanum tuberosum HOM05D002559 ORTHO05D007687 1.7e-13 80.1 93 50.5
PGSC0003DMG400011423 Solanum tuberosum HOM05D002559 ORTHO05D007687 1.7e-13 80.1 93 50.5
Sopen09g027720 Solanum pennellii HOM05D002559 ORTHO05D007687 2.2e-13 79.7 93 50.5
CANSAT64G2998 Cannabis sativa HOM05D002559 ORTHO05D007687 2.8e-13 79.3 93 49.5
Sabra06G0149900 Salix brachista HOM05D002559 ORTHO05D007687 2.8e-13 79.3 94 52.1
vmacro07884 Vaccinium macrocarpon HOM05D002559 ORTHO05D007687 2.8e-13 79.3 93 49.5
FvH4_6g21750 Fragaria vesca HOM05D002559 ORTHO05D007687 3.7e-13 79.0 91 51.6
FAN02G0508 Fragaria x ananassa HOM05D002559 ORTHO05D007687 3.7e-13 79.0 91 51.6
FAN05G1828 Fragaria x ananassa HOM05D002559 ORTHO05D007687 3.7e-13 79.0 91 51.6
FAN14G3509 Fragaria x ananassa HOM05D002559 ORTHO05D007687 3.7e-13 79.0 91 51.6
Lj5g0004649 Lotus japonicus HOM05D002559 ORTHO05D007687 3.7e-13 79.0 93 49.5
MD11G1239000 Malus domestica HOM05D002559 ORTHO05D007687 3.7e-13 79.0 93 50.5
RcHm_v2.0_Chr3g0479091 Rosa chinensis HOM05D002559 ORTHO05D007687 3.7e-13 79.0 91 51.6
CDE06G1432 Ceratophyllum demersum HOM05D002559 ORTHO05D007687 8.2e-13 77.8 93 47.3
Eucgr.A02392 Eucalyptus grandis HOM05D002559 ORTHO05D007687 8.2e-13 77.8 117 41.9
Gohir.D10G056100 Gossypium hirsutum HOM05D002559 ORTHO05D007687 8.2e-13 77.8 103 45.6
MD03G1221500 Malus domestica HOM05D002559 ORTHO05D007687 8.2e-13 77.8 113 43.4
Oeu046718.1 Olea europaea HOM05D002559 ORTHO05D007687 8.2e-13 77.8 93 49.5
Ciclev10012980m.g Citrus clementina HOM05D002559 ORTHO05D007687 1.1e-12 77.4 93 49.5
Phvul.007G261600 Phaseolus vulgaris HOM05D002559 ORTHO05D007687 1.1e-12 77.4 93 48.4
Ca_12016_v3 Cicer arietinum L. HOM05D002559 ORTHO05D007687 1.4e-12 77.0 145 37.2
Gohir.A04G053100 Gossypium hirsutum HOM05D002559 ORTHO05D007687 1.4e-12 77.0 99 45.5
SGA_v2.0_scaffold13G06362 Striga asiatica HOM05D002559 ORTHO05D007687 1.4e-12 77.0 94 47.9
Atru.chr8.1168 Acer truncatum HOM05D002559 ORTHO05D007687 2.4e-12 76.3 93 48.4
Potri.006G195200 Populus trichocarpa HOM05D002559 ORTHO05D007687 2.4e-12 76.3 91 49.5
Medtr1g054455 Medicago truncatula HOM05D002559 ORTHO05D007687 3.1e-12 75.9 93 46.2
SGA_v2.0_scaffold72G24089 Striga asiatica HOM05D002559 ORTHO05D007687 3.1e-12 75.9 94 46.8
TPR.G27694 Trifolium pratense HOM05D002559 ORTHO05D007687 3.1e-12 75.9 93 47.3
Zm00001eb278760 Zea mays HOM05D002559 ORTHO05D007687 3.1e-12 75.9 90 50.0
Haze_20033 Corylus avellana HOM05D002559 ORTHO05D007687 4.1e-12 75.5 91 49.5
QL07p024783 Quercus lobata HOM05D002559 ORTHO05D007687 5.3e-12 75.1 95 46.3
THA.LOC104824485 Tarenaya hassleriana HOM05D002559 ORTHO05D007687 5.3e-12 75.1 119 40.3
EL10Ac3g06871 Beta vulgaris HOM05D002559 ORTHO05D007687 7.0e-12 74.7 44 72.7
ECA238G4539 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.0e-12 74.7 95 46.3
Os06g0206200 Oryza sativa ssp. japonica HOM05D002559 ORTHO05D007687 7.0e-12 74.7 91 47.3
Psat6g090120 Pisum sativum HOM05D002559 ORTHO05D007687 9.1e-12 74.3 93 46.2
Sc19g0006130 Simmondsia chinensis HOM05D002559 ORTHO05D007687 9.1e-12 74.3 93 46.2
PGSC0003DMG400024714 Solanum tuberosum HOM05D002559 ORTHO05D007687 1.2e-11 73.9 94 50.0
CiPaw.10G024700 Carya illinoinensis HOM05D002559 ORTHO05D007687 1.6e-11 73.6 113 41.6
Duzib106G1845 Durio zibethinus HOM05D002559 ORTHO05D007687 1.6e-11 73.6 93 46.2
TWI77G0102 Tripterygium wilfordii HOM05D002559 ORTHO05D007687 2.6e-11 72.8 91 47.3
CSS0028542 Camellia sinensis var. sinensis HOM05D002559 ORTHO05D007687 3.5e-11 72.4 44 77.3
RcHm_v2.0_Chr7g0223201 Rosa chinensis HOM05D002559 ORTHO05D007687 3.5e-11 72.4 92 46.7
BcaB06g29220 Brassica carinata HOM05D002559 ORTHO05D007687 4.5e-11 72.0 94 46.8
Duzib093G2249 Durio zibethinus HOM05D002559 ORTHO05D007687 4.5e-11 72.0 93 46.2
Thecc.05G176500 Theobroma cacao HOM05D002559 ORTHO05D007687 4.5e-11 72.0 93 45.2
BcaB01g03428 Brassica carinata HOM05D002559 ORTHO05D007687 5.9e-11 71.6 53 66.0
Gohir.D10G055600 Gossypium hirsutum HOM05D002559 ORTHO05D007687 5.9e-11 71.6 93 45.2
THA.LOC104820386 Tarenaya hassleriana HOM05D002559 ORTHO05D007687 5.9e-11 71.6 118 39.8
Aa31LG1G24190 Aethionema arabicum HOM05D002559 ORTHO05D007687 7.7e-11 71.2 118 39.8
Aqoxy7G00622 Aquilegia oxysepala HOM05D002559 ORTHO05D007687 1.3e-10 70.5 93 44.1
A04p31940 Brassica napus HOM05D002559 ORTHO05D007687 1.7e-10 70.1 40 77.5
CARHR137050 Cardamine hirsuta HOM05D002559 ORTHO05D007687 1.7e-10 70.1 40 77.5
C03p28020 Brassica napus HOM05D002559 ORTHO05D007687 2.2e-10 69.7 52 67.3
BolC3t15172H Brassica oleracea HOM05D002559 ORTHO05D007687 2.2e-10 69.7 52 67.3
Sp4g24210 Schrenkiella parvula HOM05D002559 ORTHO05D007687 2.2e-10 69.7 40 77.5
Glyma.02G170300 Glycine max HOM05D002559 ORTHO05D007687 2.9e-10 69.3 93 44.1
Glyma.09G107200 Glycine max HOM05D002559 ORTHO05D007687 2.9e-10 69.3 93 44.1
Gohir.D04G090700 Gossypium hirsutum HOM05D002559 ORTHO05D007687 3.8e-10 68.9 93 44.1
Nitab4.5_0000698g0050 Nicotiana tabacum HOM05D002559 ORTHO05D007687 3.8e-10 68.9 93 47.3
AUR62012012 Chenopodium quinoa HOM05D002559 ORTHO05D007687 5.0e-10 68.6 94 45.7
Lalb_Chr21g0316101 Lupinus albus HOM05D002559 ORTHO05D007687 5.0e-10 68.6 90 46.7
AL4G40300 Arabidopsis lyrata HOM05D002559 ORTHO05D007687 6.5e-10 68.2 93 44.1
BcaC01g05317 Brassica carinata HOM05D002559 ORTHO05D007687 6.5e-10 68.2 40 77.5
A03p23490 Brassica napus HOM05D002559 ORTHO05D007687 6.5e-10 68.2 40 77.5
BraA03t11565Z Brassica rapa HOM05D002559 ORTHO05D007687 6.5e-10 68.2 40 77.5
Carub.0004s2427 Capsella rubella HOM05D002559 ORTHO05D007687 6.5e-10 68.2 93 44.1
DCAR_019859 Daucus carota HOM05D002559 ORTHO05D007687 6.5e-10 68.2 94 47.9
Thhalv10017359m.g Eutrema salsugineum HOM05D002559 ORTHO05D007687 6.5e-10 68.2 93 45.2
AT2G41945 Arabidopsis thaliana HOM05D002559 ORTHO05D007687 8.5e-10 67.8 93 46.2
Cfa020135 Carpinus fangiana HOM05D002559 ORTHO05D007687 1.1e-09 67.4 91 44.0
AUR62015325 Chenopodium quinoa HOM05D002559 ORTHO05D007687 1.1e-09 67.4 92 45.7
Manes.09G039000 Manihot esculenta HOM05D002559 ORTHO05D007687 1.1e-09 67.4 91 44.0
BraA04t18652Z Brassica rapa HOM05D002559 ORTHO05D007687 1.5e-09 67.0 93 45.2
BcaC02g07270 Brassica carinata HOM05D002559 ORTHO05D007687 3.2e-09 65.9 40 75.0
BolC4t28443H Brassica oleracea HOM05D002559 ORTHO05D007687 4.2e-09 65.5 98 44.9
Gorai.009G391600 Gossypium raimondii HOM05D002559 ORTHO05D007687 5.5e-09 65.1 89 42.7
Nitab4.5_0000358g0040 Nicotiana tabacum HOM05D002559 ORTHO05D007687 1.2e-08 63.9 93 45.2
HPP92_003743 Vanilla planifolia HOM05D002559 ORTHO05D007687 1.6e-08 63.5 124 37.9
VMungo0720G2494 Vigna mungo HOM05D002559 ORTHO05D007687 2.1e-08 63.2 93 39.8
CsaV3_3G038570 Cucumis sativus L. HOM05D002559 ORTHO05D007687 6.1e-08 61.6 44 59.1
Gorai.011G059300 Gossypium raimondii HOM05D002559 ORTHO05D007687 6.1e-08 61.6 108 38.9
ATR0598G195 Amborella trichopoda HOM05D002559 ORTHO05D007687 8.0e-08 61.2 92 40.2
ClCG10G017720 Citrullus lanatus HOM05D002559 ORTHO05D007687 8.0e-08 61.2 44 59.1
Sed0011167 Sechium edule HOM05D002559 ORTHO05D007687 1.4e-07 60.5 44 56.8
unitig_0.g526 Utricularia gibba HOM05D002559 ORTHO05D007687 1.8e-07 60.1 43 60.5
Rhsim03G0003900 Rhododendron simsii HOM05D002559 ORTHO05D007687 4.0e-07 58.9 76 50.0
MELO3C009602.2 Cucumis melo HOM05D002559 ORTHO05D007687 6.7e-07 58.2 98 38.8
Peaxi162Scf00003g04617 Petunia axillaris HOM05D002559 ORTHO05D007687 6.7e-07 58.2 36 75.0
COL.COLO4_29373 Corchorus olitorius HOM05D002559 ORTHO05D007687 5.7e-06 55.1 125 33.6


User provided reference genes

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