Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv16321 Davidia involucrata HOM05D006522 ORTHO05D008183 5.5e-161 570.9 279 100.0
Actinidia28878 Actinidia chinensis HOM05D001075 ORTHO05D008183 4.4e-118 428.3 264 81.1
CSS0003121 Camellia sinensis var. sinensis HOM05D006522 ORTHO05D008183 8.4e-117 424.1 279 76.7
Hma1.2p1_0070F.1_g037610 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 1.6e-112 409.8 265 78.5
CiPaw.04G095200 Carya illinoinensis HOM05D006522 ORTHO05D008183 2.4e-111 406.0 268 78.7
Thecc.01G107900 Theobroma cacao HOM05D006522 ORTHO05D008183 9.9e-110 400.6 265 76.6
GSVIVG01022189001 Vitis vinifera HOM05D006522 ORTHO05D008183 1.1e-108 397.1 300 68.3
Rhsim10G0156200 Rhododendron simsii HOM05D006522 ORTHO05D008183 3.5e-107 392.1 348 61.8
Duzib187G0580 Durio zibethinus HOM05D006522 ORTHO05D008183 7.9e-107 391.0 265 75.5
Potri.005G080300 Populus trichocarpa HOM05D006522 ORTHO05D008183 1.3e-106 390.2 266 74.1
Gohir.D03G044300 Gossypium hirsutum HOM05D006522 ORTHO05D008183 2.3e-106 389.4 265 73.6
Gohir.A02G132900 Gossypium hirsutum HOM05D006522 ORTHO05D008183 3.0e-106 389.0 265 73.2
QL06p050567 Quercus lobata HOM05D006522 ORTHO05D008183 5.6e-105 384.8 315 65.7
Gorai.003G045400 Gossypium raimondii HOM05D006522 ORTHO05D008183 9.6e-105 384.0 257 74.7
TAR376G0333 Trochodendron aralioides HOM05D006522 ORTHO05D008183 1.3e-104 383.6 278 71.9
Ciclev10027591m.g Citrus clementina HOM05D006522 ORTHO05D008183 3.6e-104 382.1 280 70.4
Eucgr.I00376 Eucalyptus grandis HOM05D006522 ORTHO05D008183 5.3e-103 378.3 274 71.2
RcHm_v2.0_Chr2g0115571 Rosa chinensis HOM05D006522 ORTHO05D008183 5.3e-103 378.3 262 72.9
TWI53G0226 Tripterygium wilfordii HOM05D006522 ORTHO05D008183 5.3e-103 378.3 263 71.9
Sed0017006 Sechium edule HOM05D006522 ORTHO05D008183 3.4e-102 375.6 265 70.9
FvH4_1g21690 Fragaria vesca HOM05D006522 ORTHO05D008183 4.5e-102 375.2 268 72.0
CANSAT01G1323 Cannabis sativa HOM05D006522 ORTHO05D008183 7.6e-102 374.4 268 70.9
Manes.13G077900 Manihot esculenta HOM05D006522 ORTHO05D008183 5.5e-100 368.2 296 64.5
ECA238G0371 Erigeron canadensis HOM05D006522 ORTHO05D008183 3.5e-99 365.5 266 69.5
HanXRQChr14g0446011 Helianthus annuus HOM05D006522 ORTHO05D008183 4.6e-99 365.2 269 67.7
MD15G1329600 Malus domestica HOM05D006522 ORTHO05D008183 4.6e-99 365.2 273 70.7
Hma1.2p1_0070F.1_g037620 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 6.7e-98 361.3 257 73.5
THA.LOC104819310 Tarenaya hassleriana HOM05D006522 ORTHO05D008183 8.7e-98 360.9 268 70.1
Carub.0006s0853 Capsella rubella HOM05D006522 ORTHO05D008183 1.1e-97 360.5 265 67.9
Thhalv10014396m.g Eutrema salsugineum HOM05D006522 ORTHO05D008183 1.1e-97 360.5 265 67.9
Sc23g0003650 Simmondsia chinensis HOM05D006522 ORTHO05D008183 1.9e-97 359.8 268 67.5
Nitab4.5_0001027g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 1.6e-96 356.7 268 66.0
Nitab4.5_0003396g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 1.6e-96 356.7 267 66.7
AL6G20520 Arabidopsis lyrata HOM05D006522 ORTHO05D008183 2.1e-96 356.3 266 67.7
Lj4g0021245 Lotus japonicus HOM05D006522 ORTHO05D008183 2.8e-96 355.9 271 66.8
Cc00_g21690 Coffea canephora HOM05D006522 ORTHO05D008183 3.7e-96 355.5 292 65.1
Sopen05g033820 Solanum pennellii HOM05D006522 ORTHO05D008183 4.8e-96 355.1 270 67.0
PGSC0003DMG400023383 Solanum tuberosum HOM05D006522 ORTHO05D008183 6.2e-96 354.8 270 67.0
Sp6g33330 Schrenkiella parvula HOM05D006522 ORTHO05D008183 8.1e-96 354.4 266 67.3
VMungo0251G3519 Vigna mungo HOM05D006522 ORTHO05D008183 3.1e-95 352.4 279 66.7
BraA10t44795Z Brassica rapa HOM05D006522 ORTHO05D008183 9.0e-95 350.9 266 66.9
CAN.G1550.13 Capsicum annuum HOM05D006522 ORTHO05D008183 9.0e-95 350.9 270 66.7
Aa31LG3G17070 Aethionema arabicum HOM05D006522 ORTHO05D008183 1.2e-94 350.5 264 67.0
BcaC04g19347 Brassica carinata HOM05D006522 ORTHO05D008183 2.0e-94 349.7 266 66.5
BolC9t59510H Brassica oleracea HOM05D006522 ORTHO05D008183 2.0e-94 349.7 266 66.5
Atru.chr4.281 Acer truncatum HOM05D006522 ORTHO05D008183 2.6e-94 349.4 257 70.8
C09p67500 Brassica napus HOM05D006522 ORTHO05D008183 2.6e-94 349.4 266 66.5
PSO675G0908 Papaver somniferum HOM05D006522 ORTHO05D008183 2.6e-94 349.4 272 68.0
MELO3C017578.2 Cucumis melo HOM05D006522 ORTHO05D008183 3.4e-94 349.0 310 61.0
Medtr8g091510 Medicago truncatula HOM05D006522 ORTHO05D008183 4.5e-94 348.6 271 66.1
PSO541G5899 Papaver somniferum HOM05D006522 ORTHO05D008183 1.3e-93 347.1 271 67.5
PGR004G1063 Punica granatum HOM05D006522 ORTHO05D008183 2.9e-93 345.9 258 69.0
FAN26G1180 Fragaria x ananassa HOM05D006522 ORTHO05D008183 1.9e-92 343.2 331 57.7
Phvul.002G262800 Phaseolus vulgaris HOM05D006522 ORTHO05D008183 3.2e-92 342.4 273 65.9
Psat7g053400 Pisum sativum HOM05D006522 ORTHO05D008183 4.2e-92 342.0 272 64.7
arahy.Tifrunner.gnm1.ann1.8IYW0J Arachis hypogaea HOM05D006522 ORTHO05D008183 7.9e-91 337.8 282 63.1
Ca_17709_v3 Cicer arietinum L. HOM05D006522 ORTHO05D008183 7.9e-91 337.8 275 62.2
Lalb_Chr12g0203641 Lupinus albus HOM05D006522 ORTHO05D008183 1.0e-90 337.4 271 64.6
Sabra05G0065900 Salix brachista HOM05D006522 ORTHO05D008183 1.3e-90 337.0 258 68.6
BcaB08g37142 Brassica carinata HOM05D006522 ORTHO05D008183 2.3e-90 336.3 253 67.2
EL10Ac1g00879 Beta vulgaris HOM05D006522 ORTHO05D008183 5.1e-90 335.1 266 64.3
Prupe.6G178600 Prunus persica HOM05D006522 ORTHO05D008183 1.1e-89 334.0 265 66.8
Glyma.05G181800 Glycine max HOM05D006522 ORTHO05D008183 3.3e-89 332.4 277 64.3
AUR62013645 Chenopodium quinoa HOM05D006522 ORTHO05D008183 7.4e-89 331.3 267 63.3
Glyma.08G139500 Glycine max HOM05D006522 ORTHO05D008183 1.1e-87 327.4 274 63.5
Ah.05g174330 Amaranthus hybridus HOM05D006522 ORTHO05D008183 1.4e-87 327.0 265 63.8
vmacro12933 Vaccinium macrocarpon HOM05D006522 ORTHO05D008183 2.4e-87 326.2 265 66.4
Nn5g28991 Nelumbo nucifera HOM05D006522 ORTHO05D008183 4.1e-87 325.5 262 67.2
Os03g0195200 Oryza sativa ssp. japonica HOM05D006522 ORTHO05D008183 4.1e-87 325.5 272 64.3
HPP92_027257 Vanilla planifolia HOM05D006522 ORTHO05D008183 1.2e-86 323.9 271 64.6
MSTRG.23326 Avicennia marina HOM05D006522 ORTHO05D008183 1.5e-86 323.6 268 63.4
Zm00001eb401110 Zea mays HOM05D006522 ORTHO05D008183 1.0e-85 320.9 263 63.9
TPR.G2232 Trifolium pratense HOM05D006522 ORTHO05D008183 5.0e-85 318.5 269 62.5
COL.COLO4_11046 Corchorus olitorius HOM05D006522 ORTHO05D008183 1.1e-84 317.4 230 72.6
Migut.H02394 Erythranthe guttata HOM05D006522 ORTHO05D008183 2.5e-84 316.2 238 68.1
AUR62004203 Chenopodium quinoa HOM05D006522 ORTHO05D008183 9.3e-84 314.3 265 60.8
SGA_v2.0_scaffold2G01317 Striga asiatica HOM05D006522 ORTHO05D008183 1.2e-83 313.9 233 66.5
Lj2A556G28 Lonicera japonica HOM05D006522 ORTHO05D008183 4.6e-83 312.0 234 69.2
ATR0564G484 Amborella trichopoda HOM05D006522 ORTHO05D008183 1.3e-80 303.9 268 60.1
FAN19G2878 Fragaria x ananassa HOM05D006522 ORTHO05D008183 1.3e-80 303.9 308 56.5
CARHR203220 Cardamine hirsuta HOM05D006522 ORTHO05D008183 1.2e-78 297.4 211 69.2
Cfa002723 Carpinus fangiana HOM05D006522 ORTHO05D008183 3.4e-78 295.8 177 80.8
SalBow3G1116 Salvia bowleyana HOM05D006522 ORTHO05D008183 3.8e-77 292.4 234 64.5
Oeu028389.1 Olea europaea HOM05D006522 ORTHO05D008183 3.2e-76 289.3 192 72.9
CsaV3_UNG186480 Cucumis sativus L. HOM05D006522 ORTHO05D008183 1.2e-75 287.3 181 77.3
Lsat_1_v5_gn_2_67761 Lactuca sativa HOM05D006522 ORTHO05D008183 1.2e-75 287.3 263 59.3
unitig_736.g22572 Utricularia gibba HOM05D006522 ORTHO05D008183 1.6e-75 287.0 230 61.7
A10p27440 Brassica napus HOM05D006522 ORTHO05D008183 5.1e-74 282.0 190 72.6
Aqoxy6G00537 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 1.1e-73 280.8 178 77.5
AT5G10070 Arabidopsis thaliana HOM05D006522 ORTHO05D008183 5.3e-71 271.9 188 71.8
ECA238G2930 Erigeron canadensis HOM05D006522 ORTHO05D008183 2.0e-70 270.0 189 71.4
arahy.Tifrunner.gnm1.ann1.2EL0K0 Arachis hypogaea HOM05D006522 ORTHO05D008183 5.9e-70 268.5 175 76.0
ClCG09G014260 Citrullus lanatus HOM05D006522 ORTHO05D008183 1.1e-65 254.2 274 54.7
Mapoly0168s0016 Marchantia polymorpha HOM05D006522 ORTHO05D008183 3.3e-65 252.7 267 53.6
AUR62013648 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.7e-64 250.4 257 52.9
Pp3c17_17150 Physcomitrium patens HOM05D006522 ORTHO05D008183 2.4e-63 246.5 242 52.9
BcaB08g37140 Brassica carinata HOM05D006522 ORTHO05D008183 1.1e-60 237.7 135 80.7
Psat7g089320 Pisum sativum HOM05D006522 ORTHO05D008183 2.1e-59 233.4 181 63.0
CBR_g22385 Chara braunii HOM05D006522 ORTHO05D008183 6.1e-59 231.9 277 44.0
SMO139G0021 Selaginella moellendorffii HOM05D006522 ORTHO05D008183 6.1e-59 231.9 212 52.4
MCO11G860 Micromonas commoda HOM05D006522 ORTHO05D008183 3.8e-53 212.6 220 48.2
Cre17.g698950 Chlamydomonas reinhardtii HOM05D006522 ORTHO05D008183 1.0e-50 204.5 177 55.4
Haze_26963 Corylus avellana HOM05D006522 ORTHO05D008183 1.3e-48 197.6 215 45.6
MD01G1023100 Malus domestica HOM05D006522 ORTHO05D008183 1.4e-47 194.1 135 74.8
CDE10G0337 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 5.4e-47 192.2 183 57.9
PRCOL_00002914 Prasinoderma coloniale HOM05D006522 ORTHO05D008183 2.9e-45 186.4 165 53.3
Haze_24999 Corylus avellana HOM05D006522 ORTHO05D008183 1.8e-42 177.2 182 57.1
Cfa022135 Carpinus fangiana HOM05D006522 ORTHO05D008183 8.6e-37 158.3 173 42.2
Eucgr.L02916 Eucalyptus grandis HOM05D006522 ORTHO05D008183 1.6e-30 137.5 106 68.9
AUR62004200 Chenopodium quinoa HOM05D006522 ORTHO05D008183 2.0e-25 120.6 228 36.8
SEGI_11019 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 1.6e-22 110.9 56 87.5
SHI11627 Sapria himalayana HOM05D006522 ORTHO05D008183 8.6e-21 105.1 97 55.7
COL.COLO4_11047 Corchorus olitorius HOM05D006522 ORTHO05D008183 5.6e-20 102.4 100 58.0
Potri.007G087000 Populus trichocarpa HOM05D006522 ORTHO05D008183 2.0e-17 94.0 77 63.6
Aqoxy6G00538 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 1.3e-16 91.3 125 45.6
AagrBONN_evm.TU.Sc2ySwM_368.3361 Anthoceros agrestis HOM05D006522 ORTHO05D008183 1.0e-13 81.6 91 44.0
CDE10G0344 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 6.6e-13 79.0 81 50.6
SEGI_36547 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 6.6e-13 79.0 84 50.0
DCAR_011494 Daucus carota HOM05D006522 ORTHO05D008183 1.9e-12 77.4 63 66.7
SHI11626 Sapria himalayana HOM05D006522 ORTHO05D008183 2.5e-12 77.0 49 63.3
MD01G1023200 Malus domestica HOM05D006522 ORTHO05D008183 1.2e-11 74.7 49 65.3
DCAR_011495 Daucus carota HOM05D006522 ORTHO05D008183 2.6e-09 67.0 54 64.8


User provided reference genes

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