Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv16320 Davidia involucrata HOM05D004921 ORTHO05D006008 7.5e-74 280.4 140 100.0
Dinv21950 Davidia involucrata HOM05D004921 ORTHO05D006008 8.1e-60 233.8 125 93.6
Hma1.2p1_0070F.1_g037680 Hydrangea macrophylla HOM05D004921 ORTHO05D006008 3.5e-55 218.4 126 86.5
TAR381G0204 Trochodendron aralioides HOM05D004921 ORTHO05D006008 1.9e-53 212.6 125 83.2
CANSAT01G2911 Cannabis sativa HOM05D004921 ORTHO05D006008 2.5e-53 212.2 126 82.5
MSTRG.2547 Avicennia marina HOM05D004921 ORTHO05D006008 4.3e-53 211.5 125 81.6
TAR381G1578 Trochodendron aralioides HOM05D004921 ORTHO05D006008 5.6e-53 211.1 125 82.4
RcHm_v2.0_Chr2g0115541 Rosa chinensis HOM05D004921 ORTHO05D006008 4.7e-52 208.0 125 81.6
TWI53G0980 Tripterygium wilfordii HOM05D004921 ORTHO05D006008 4.7e-52 208.0 125 80.0
Prupe.6G178900 Prunus persica HOM05D004921 ORTHO05D006008 6.2e-52 207.6 125 80.8
QL06p050536 Quercus lobata HOM05D004921 ORTHO05D006008 1.4e-51 206.5 125 80.0
MSTRG.23325 Avicennia marina HOM05D004921 ORTHO05D006008 2.3e-51 205.7 125 77.6
DCAR_001020 Daucus carota HOM05D004921 ORTHO05D006008 2.3e-51 205.7 125 82.4
Sopen04g024290 Solanum pennellii HOM05D004921 ORTHO05D006008 8.9e-51 203.8 124 80.6
Gohir.D11G225200 Gossypium hirsutum HOM05D004921 ORTHO05D006008 1.2e-50 203.4 125 79.2
Gorai.007G242500 Gossypium raimondii HOM05D004921 ORTHO05D006008 1.2e-50 203.4 125 79.2
Nn5g28998 Nelumbo nucifera HOM05D004921 ORTHO05D006008 1.2e-50 203.4 125 80.0
Atru.chr4.263 Acer truncatum HOM05D004921 ORTHO05D006008 2.0e-50 202.6 125 78.4
MD01G1023900 Malus domestica HOM05D004921 ORTHO05D006008 2.0e-50 202.6 125 77.6
COL.COLO4_11048 Corchorus olitorius HOM05D004921 ORTHO05D006008 9.9e-50 200.3 125 77.6
Duzib147G0642 Durio zibethinus HOM05D004921 ORTHO05D006008 9.9e-50 200.3 125 79.2
Gohir.A11G198900 Gossypium hirsutum HOM05D004921 ORTHO05D006008 9.9e-50 200.3 125 78.4
Actinidia36610 Actinidia chinensis HOM05D004921 ORTHO05D006008 2.2e-49 199.1 125 78.4
Ciclev10025222m.g Citrus clementina HOM05D004921 ORTHO05D006008 2.9e-49 198.7 124 77.4
ECA246G4277 Erigeron canadensis HOM05D004921 ORTHO05D006008 2.9e-49 198.7 125 76.8
Migut.H02393 Erythranthe guttata HOM05D004921 ORTHO05D006008 3.8e-49 198.4 126 76.2
GSVIVG01022188001 Vitis vinifera HOM05D004921 ORTHO05D006008 4.9e-49 198.0 126 77.8
Rhsim10G0156300 Rhododendron simsii HOM05D004921 ORTHO05D006008 6.4e-49 197.6 130 76.9
Duzib187G0704 Durio zibethinus HOM05D004921 ORTHO05D006008 8.4e-49 197.2 125 77.6
Thecc.01G107800 Theobroma cacao HOM05D004921 ORTHO05D006008 8.4e-49 197.2 125 76.8
vmacro12934 Vaccinium macrocarpon HOM05D004921 ORTHO05D006008 8.4e-49 197.2 125 79.2
Lj4A880G51 Lonicera japonica HOM05D004921 ORTHO05D006008 1.1e-48 196.8 125 82.4
PGR004G1500 Punica granatum HOM05D004921 ORTHO05D006008 1.4e-48 196.4 125 75.2
Lsat_1_v5_gn_5_40701 Lactuca sativa HOM05D004921 ORTHO05D006008 2.4e-48 195.7 125 76.0
Eucgr.I00377 Eucalyptus grandis HOM05D004921 ORTHO05D006008 4.1e-48 194.9 125 77.6
Gorai.008G103200 Gossypium raimondii HOM05D004921 ORTHO05D006008 5.4e-48 194.5 124 75.8
Gohir.D12G094600 Gossypium hirsutum HOM05D004921 ORTHO05D006008 9.2e-48 193.7 124 75.8
HanXRQChr02g0041141 Helianthus annuus HOM05D004921 ORTHO05D006008 1.2e-47 193.4 125 74.4
CiPaw.03G138100 Carya illinoinensis HOM05D004921 ORTHO05D006008 1.6e-47 193.0 125 76.8
Gohir.A12G091122 Gossypium hirsutum HOM05D004921 ORTHO05D006008 1.6e-47 193.0 124 75.8
Aa31LG6G15580 Aethionema arabicum HOM05D004921 ORTHO05D006008 2.1e-47 192.6 124 74.2
Manes.12G138700 Manihot esculenta HOM05D004921 ORTHO05D006008 6.0e-47 191.0 125 72.0
Potri.005G080200 Populus trichocarpa HOM05D004921 ORTHO05D006008 6.0e-47 191.0 125 73.6
THA.LOC104807708 Tarenaya hassleriana HOM05D004921 ORTHO05D006008 6.0e-47 191.0 124 75.0
CARHR247030 Cardamine hirsuta HOM05D004921 ORTHO05D006008 7.8e-47 190.7 125 73.6
Haze_24997 Corylus avellana HOM05D004921 ORTHO05D006008 1.3e-46 189.9 133 72.2
Thhalv10024641m.g Eutrema salsugineum HOM05D004921 ORTHO05D006008 1.7e-46 189.5 125 73.6
Glyma.05G181700 Glycine max HOM05D004921 ORTHO05D006008 1.7e-46 189.5 125 73.6
Carub.0007s0157 Capsella rubella HOM05D004921 ORTHO05D006008 2.3e-46 189.1 124 74.2
AUR62003756 Chenopodium quinoa HOM05D004921 ORTHO05D006008 3.9e-46 188.3 125 72.0
Lalb_Chr13g0296081 Lupinus albus HOM05D004921 ORTHO05D006008 6.6e-46 187.6 125 72.8
Nitab4.5_0001095g0090 Nicotiana tabacum HOM05D004921 ORTHO05D006008 6.6e-46 187.6 124 75.8
Potri.007G087100 Populus trichocarpa HOM05D004921 ORTHO05D006008 8.6e-46 187.2 125 72.0
FvH4_1g21670 Fragaria vesca HOM05D004921 ORTHO05D006008 1.1e-45 186.8 125 72.0
AL7G11890 Arabidopsis lyrata HOM05D004921 ORTHO05D006008 1.5e-45 186.4 124 74.2
AT4G39690 Arabidopsis thaliana HOM05D004921 ORTHO05D006008 1.5e-45 186.4 124 75.0
Sp7g36200 Schrenkiella parvula HOM05D004921 ORTHO05D006008 1.9e-45 186.0 124 71.8
Phvul.002G262700 Phaseolus vulgaris HOM05D004921 ORTHO05D006008 3.3e-45 185.3 124 73.4
Aqoxy6G00539 Aquilegia oxysepala HOM05D004921 ORTHO05D006008 4.3e-45 184.9 125 72.8
Sc03g0002320 Simmondsia chinensis HOM05D004921 ORTHO05D006008 5.6e-45 184.5 124 72.6
Psat7g053360 Pisum sativum HOM05D004921 ORTHO05D006008 9.6e-45 183.7 125 72.8
TPR.G2186 Trifolium pratense HOM05D004921 ORTHO05D006008 9.6e-45 183.7 122 73.8
SGA_v2.0_scaffold51G18730 Striga asiatica HOM05D004921 ORTHO05D006008 1.2e-44 183.3 130 68.5
BcaB03g12266 Brassica carinata HOM05D004921 ORTHO05D006008 2.1e-44 182.6 124 71.0
Lj4g0017071 Lotus japonicus HOM05D004921 ORTHO05D006008 2.8e-44 182.2 125 72.0
Lalb_Chr07g0184941 Lupinus albus HOM05D004921 ORTHO05D006008 2.8e-44 182.2 124 72.6
BcaC01g00311 Brassica carinata HOM05D004921 ORTHO05D006008 3.6e-44 181.8 124 70.2
C03p78130 Brassica napus HOM05D004921 ORTHO05D006008 3.6e-44 181.8 124 70.2
BraA08t34298Z Brassica rapa HOM05D004921 ORTHO05D006008 3.6e-44 181.8 124 70.2
Glyma.08G139400 Glycine max HOM05D004921 ORTHO05D006008 6.2e-44 181.0 125 71.2
MBI05_g00773_MAGBIO Magnolia biondii HOM05D004921 ORTHO05D006008 6.2e-44 181.0 125 73.6
AUR62002041 Chenopodium quinoa HOM05D004921 ORTHO05D006008 8.1e-44 180.6 125 69.6
VMungo0251G2130 Vigna mungo HOM05D004921 ORTHO05D006008 8.1e-44 180.6 125 72.0
Sed0006076 Sechium edule HOM05D004921 ORTHO05D006008 2.4e-43 179.1 125 69.6
arahy.Tifrunner.gnm1.ann1.WRB6NJ Arachis hypogaea HOM05D004921 ORTHO05D006008 3.1e-43 178.7 128 68.8
FAN19G2080 Fragaria x ananassa HOM05D004921 ORTHO05D006008 3.1e-43 178.7 135 66.7
PSO133G0077 Papaver somniferum HOM05D004921 ORTHO05D006008 3.1e-43 178.7 124 71.8
BolC3t20076H Brassica oleracea HOM05D004921 ORTHO05D006008 4.0e-43 178.3 124 68.5
arahy.Tifrunner.gnm1.ann1.P05418 Arachis hypogaea HOM05D004921 ORTHO05D006008 5.2e-43 177.9 132 66.7
MELO3C007782.2 Cucumis melo HOM05D004921 ORTHO05D006008 6.9e-43 177.6 125 68.8
FAN28G0310 Fragaria x ananassa HOM05D004921 ORTHO05D006008 6.9e-43 177.6 135 65.9
CsaV3_6G045720 Cucumis sativus L. HOM05D004921 ORTHO05D006008 8.9e-43 177.2 125 68.8
PSO541G2636 Papaver somniferum HOM05D004921 ORTHO05D006008 1.2e-42 176.8 124 71.0
FAN26G3332 Fragaria x ananassa HOM05D004921 ORTHO05D006008 2.0e-42 176.0 135 65.9
FAN26G3387 Fragaria x ananassa HOM05D004921 ORTHO05D006008 2.0e-42 176.0 135 65.9
Medtr8g091480 Medicago truncatula HOM05D004921 ORTHO05D006008 2.0e-42 176.0 125 69.6
Peaxi162Scf00204g00620 Petunia axillaris HOM05D004921 ORTHO05D006008 3.4e-42 175.3 124 71.8
ClCG01G019030 Citrullus lanatus HOM05D004921 ORTHO05D006008 1.7e-41 172.9 125 67.2
FAN23G2445 Fragaria x ananassa HOM05D004921 ORTHO05D006008 2.2e-41 172.6 151 59.6
Sabra05G0065800 Salix brachista HOM05D004921 ORTHO05D006008 4.9e-41 171.4 156 57.7
A08p23440 Brassica napus HOM05D004921 ORTHO05D006008 8.4e-41 170.6 147 59.9
CDE06G0766 Ceratophyllum demersum HOM05D004921 ORTHO05D006008 1.4e-40 169.9 124 67.7
CDE04G0927 Ceratophyllum demersum HOM05D004921 ORTHO05D006008 5.4e-40 167.9 124 67.7
EL10Ac6g15063 Beta vulgaris HOM05D004921 ORTHO05D006008 6.0e-39 164.5 125 67.2
Hund13647 Selenicereus undatus HOM05D004921 ORTHO05D006008 6.6e-38 161.0 125 65.6
Ah.03g142660 Amaranthus hybridus HOM05D004921 ORTHO05D006008 1.3e-36 156.8 125 62.4
MBI05_g36740_MAGBIO Magnolia biondii HOM05D004921 ORTHO05D006008 1.6e-36 156.4 125 64.8
ATR0661G561 Amborella trichopoda HOM05D004921 ORTHO05D006008 1.4e-35 153.3 125 62.4
Cc07_g15670 Coffea canephora HOM05D004921 ORTHO05D006008 5.3e-35 151.4 91 80.2
HPP92_016473 Vanilla planifolia HOM05D004921 ORTHO05D006008 2.2e-33 146.0 124 60.5
HPP92_027138 Vanilla planifolia HOM05D004921 ORTHO05D006008 4.9e-33 144.8 124 60.5
Zm00001eb431730 Zea mays HOM05D004921 ORTHO05D006008 4.9e-33 144.8 124 57.3
Nitab4.5_0000518g0050 Nicotiana tabacum HOM05D004921 ORTHO05D006008 8.4e-33 144.1 85 81.2
CAN.G727.1 Capsicum annuum HOM05D004921 ORTHO05D006008 4.2e-32 141.7 91 74.7
BcaNung05547 Brassica carinata HOM05D004921 ORTHO05D006008 7.1e-32 141.0 124 62.1
MD15G1329400 Malus domestica HOM05D004921 ORTHO05D006008 2.1e-31 139.4 125 58.4
Sabra07G0072000 Salix brachista HOM05D004921 ORTHO05D006008 1.3e-28 130.2 144 50.0
SEGI_07937 Sequoiadendron giganteum HOM05D004921 ORTHO05D006008 2.8e-28 129.0 123 54.5
unitig_0.g2479 Utricularia gibba HOM05D004921 ORTHO05D006008 3.1e-27 125.6 119 54.6
Cpa.g.sc82.58 Carica papaya HOM05D004921 ORTHO05D006008 3.4e-26 122.1 86 70.9
Pp3c3_27510 Physcomitrium patens HOM05D004921 ORTHO05D006008 5.6e-21 104.8 113 49.6
BolC1t00074H Brassica oleracea HOM05D004921 ORTHO05D006008 9.6e-21 104.0 68 75.0
AagrBONN_evm.TU.Sc2ySwM_344.1023 Anthoceros agrestis HOM05D004921 ORTHO05D006008 2.1e-20 102.8 119 45.4
BcaNung00891 Brassica carinata HOM05D004921 ORTHO05D006008 2.1e-20 102.8 69 75.4
Nn5g31279 Nelumbo nucifera HOM05D004921 ORTHO05D006008 1.4e-19 100.1 66 75.8
C01p00710 Brassica napus HOM05D004921 ORTHO05D006008 2.4e-19 99.4 69 73.9
CBR_g51480 Chara braunii HOM05D004921 ORTHO05D006008 3.1e-19 99.0 117 43.6
Mapoly0001s0396 Marchantia polymorpha HOM05D004921 ORTHO05D006008 1.0e-17 94.0 116 44.0
SMO197G0017 Selaginella moellendorffii HOM05D004921 ORTHO05D006008 1.3e-17 93.6 113 46.0
SEGI_21175 Sequoiadendron giganteum HOM05D004921 ORTHO05D006008 8.4e-17 90.9 85 52.9
BraA01t00066Z Brassica rapa HOM05D004921 ORTHO05D006008 3.5e-15 85.5 73 60.3
SMO174G0199 Selaginella moellendorffii HOM05D004921 ORTHO05D006008 3.5e-15 85.5 120 35.8
A01p00580 Brassica napus HOM05D004921 ORTHO05D006008 6.0e-15 84.7 73 58.9
Cc07_g15680 Coffea canephora HOM05D004921 ORTHO05D006008 1.3e-12 77.0 45 84.4
Actinidia16048 Actinidia chinensis HOM05D004921 ORTHO05D006008 6.3e-12 74.7 53 69.8
Cpa.g.sc82.56 Carica papaya HOM05D004921 ORTHO05D006008 1.2e-10 70.5 40 82.5
MCO12G391 Micromonas commoda HOM05D004921 ORTHO05D006008 1.5e-10 70.1 123 30.9


User provided reference genes

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