Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv16230 Davidia involucrata HOM05D009738 ORTHO05D011821 1.5e-71 272.7 132 100.0
Dinv41014 Davidia involucrata HOM05D001668 ORTHO05D001693 8.4e-67 256.9 131 94.7
Dinv28075 Davidia involucrata HOM05D009738 ORTHO05D011821 1.5e-52 209.5 107 92.5
Dinv40604 Davidia involucrata HOM05D009738 ORTHO05D011821 2.7e-41 172.2 130 64.6
vmacro07382 Vaccinium macrocarpon HOM05D009738 ORTHO05D011821 2.4e-37 159.1 130 60.0
Dinv19453 Davidia involucrata HOM05D009738 ORTHO05D011821 4.1e-37 158.3 110 69.1
Dinv38656 Davidia involucrata HOM05D009738 ORTHO05D011821 1.0e-35 153.7 131 65.6
Dinv10885 Davidia involucrata HOM05D009738 ORTHO05D011821 1.7e-35 152.9 110 66.4
Hma1.2p1_1287F.1_g273260 Hydrangea macrophylla HOM05D009738 ORTHO05D011821 2.7e-33 145.6 108 63.0
Dinv23708 Davidia involucrata HOM05D009738 ORTHO05D011821 8.7e-32 140.6 110 61.8
vmacro04017 Vaccinium macrocarpon HOM05D009738 ORTHO05D011821 1.9e-31 139.4 131 57.3
Dinv32094 Davidia involucrata HOM05D009738 ORTHO05D011821 2.5e-31 139.0 94 69.1
Rhsim13G0212700 Rhododendron simsii HOM05D002367 ORTHO05D011821 7.4e-31 137.5 131 55.7
RhsimUnG0078100 Rhododendron simsii HOM05D009738 ORTHO05D011821 3.9e-24 115.2 130 45.4
Rhsim03G0079000 Rhododendron simsii HOM05D009738 ORTHO05D011821 1.4e-21 106.7 89 60.7
Dinv20849 Davidia involucrata HOM05D009738 ORTHO05D011821 9.1e-21 104.0 50 94.0
Dinv31581 Davidia involucrata HOM05D009738 ORTHO05D011821 5.7e-15 84.7 105 50.5
Dinv23410 Davidia involucrata HOM05D009738 ORTHO05D011821 1.0e-11 73.9 110 45.5
Dinv22307 Davidia involucrata HOM05D009738 ORTHO05D011821 2.5e-10 69.3 110 43.6
Dinv01514 Davidia involucrata HOM05D009738 ORTHO05D011821 7.2e-10 67.8 84 46.4
Dinv01257 Davidia involucrata HOM05D009738 ORTHO05D011821 1.0e-08 63.9 58 63.8
Dinv05726 Davidia involucrata HOM05D009738 ORTHO05D011821 1.8e-08 63.2 70 50.0
CiPaw.15G037700 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.3e-08 62.8 94 36.2
FvH4_3g29014 Fragaria vesca HOM05D001576 ORTHO05D000401 3.0e-08 62.4 105 32.4
CiPaw.01G307400 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.5e-07 60.1 94 35.1
CiPaw.08G134700 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.5e-07 60.1 94 35.1
CiPaw.08G157400 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.5e-07 60.1 94 35.1
Dinv32859 Davidia involucrata HOM05D009738 ORTHO05D011821 1.5e-07 60.1 61 57.4
CiPaw.03G129800 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.0e-07 59.7 77 37.7
FvH4_7g13271 Fragaria vesca HOM05D001576 ORTHO05D000401 2.0e-07 59.7 105 31.4
vmacro14205 Vaccinium macrocarpon HOM05D009738 ORTHO05D011821 2.0e-07 59.7 124 39.5
CiPaw.14G060500 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.6e-07 59.3 94 35.1
SGA_v2.0_scaffold11G05878 Striga asiatica HOM05D001576 ORTHO05D000401 3.3e-07 58.9 87 29.9
SGA_v2.0_scaffold239G43990 Striga asiatica HOM05D001576 ORTHO05D000401 3.3e-07 58.9 87 29.9
QL02p009469 Quercus lobata HOM05D001576 ORTHO05D000401 7.5e-07 57.8 121 31.4
Atru.chr13.1502 Acer truncatum HOM05D036501 ORTHO05D030764 1.7e-06 56.6 67 34.3
CiPaw.01G092600 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.7e-06 56.6 75 37.3
SGA_v2.0_scaffold61G21156 Striga asiatica HOM05D008413 ORTHO05D000401 2.2e-06 56.2 105 33.3
Aqoxy1G01456 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 2.8e-06 55.8 106 30.2
CiPaw.15G050900 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.8e-06 55.8 107 31.8
CiPaw.14G040600 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.7e-06 55.5 92 33.7
Rhsim03G0149900 Rhododendron simsii HOM05D001576 ORTHO05D000401 3.7e-06 55.5 134 29.1
TWI73G0420 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 3.7e-06 55.5 99 30.3
PSO384G2190 Papaver somniferum HOM05D008413 ORTHO05D000401 4.8e-06 55.1 78 34.6
TPR.G23664 Trifolium pratense HOM05D000589 ORTHO05D000401 4.8e-06 55.1 124 29.8
TWI12G0266 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 4.8e-06 55.1 123 27.6
CiPaw.02G050500 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.2e-06 54.3 75 34.7
CiPaw.09G174900 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.2e-06 54.3 76 31.6


User provided reference genes

Program Settings