Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv16227 Davidia involucrata HOM05D006252 ORTHO05D007909 2.3e-82 308.9 165 100.0
QL01p014977 Quercus lobata HOM05D006252 ORTHO05D007909 2.2e-64 249.2 148 87.8
Thecc.09G298300 Theobroma cacao HOM05D006252 ORTHO05D007909 2.2e-64 249.2 148 87.2
Atru.chr3.3505 Acer truncatum HOM05D006252 ORTHO05D007909 1.4e-63 246.5 149 86.6
CSS0004051 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 1.4e-63 246.5 147 88.4
CSS0044427 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 1.4e-63 246.5 147 88.4
Hma1.2p1_0051F.1_g029510 Hydrangea macrophylla HOM05D006252 ORTHO05D007909 3.2e-63 245.4 149 88.6
Ciclev10029219m.g Citrus clementina HOM05D006252 ORTHO05D007909 7.0e-63 244.2 149 85.2
TAR633G0073 Trochodendron aralioides HOM05D006252 ORTHO05D007909 7.0e-63 244.2 149 87.2
Nn6g35212 Nelumbo nucifera HOM05D006252 ORTHO05D007909 2.7e-62 242.3 148 85.1
Gorai.009G090100 Gossypium raimondii HOM05D006252 ORTHO05D007909 3.5e-62 241.9 148 86.5
Gohir.D05G088000 Gossypium hirsutum HOM05D006252 ORTHO05D007909 1.0e-61 240.4 148 85.8
Gohir.A05G086700 Gossypium hirsutum HOM05D006252 ORTHO05D007909 3.0e-61 238.8 148 85.1
Manes.11G152500 Manihot esculenta HOM05D006252 ORTHO05D007909 3.9e-61 238.4 148 85.8
Cpa.g.sc47.1 Carica papaya HOM05D006252 ORTHO05D007909 5.0e-61 238.0 148 84.5
Sabra04G0147700 Salix brachista HOM05D006252 ORTHO05D007909 8.6e-61 237.3 148 86.5
Cc08_g04460 Coffea canephora HOM05D006252 ORTHO05D007909 1.1e-60 236.9 147 83.7
Sed0008981 Sechium edule HOM05D006252 ORTHO05D007909 1.1e-60 236.9 147 85.0
Cc01_g10250 Coffea canephora HOM05D006252 ORTHO05D007909 1.5e-60 236.5 147 84.4
Potri.004G217000 Populus trichocarpa HOM05D006252 ORTHO05D007909 3.3e-60 235.3 148 85.1
TWI79G1340 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 5.6e-60 234.6 147 83.7
COL.COLO4_19198 Corchorus olitorius HOM05D006252 ORTHO05D007909 7.3e-60 234.2 148 82.4
ClCG03G002460 Citrullus lanatus HOM05D006252 ORTHO05D007909 9.5e-60 233.8 147 85.0
CsaV3_1G013140 Cucumis sativus L. HOM05D006252 ORTHO05D007909 9.5e-60 233.8 149 83.2
Thhalv10002672m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 9.5e-60 233.8 148 82.4
HanXRQChr02g0055341 Helianthus annuus HOM05D006252 ORTHO05D007909 9.5e-60 233.8 146 84.2
Lsat_1_v5_gn_6_43381 Lactuca sativa HOM05D006252 ORTHO05D007909 9.5e-60 233.8 148 83.1
MELO3C004995.2 Cucumis melo HOM05D006252 ORTHO05D007909 1.2e-59 233.4 149 83.9
CiPaw.13G122300 Carya illinoinensis HOM05D006252 ORTHO05D007909 2.1e-59 232.6 149 83.2
Actinidia07187 Actinidia chinensis HOM05D006252 ORTHO05D007909 3.6e-59 231.9 144 84.0
RcHm_v2.0_Chr5g0056671 Rosa chinensis HOM05D006252 ORTHO05D007909 3.6e-59 231.9 148 81.8
THA.LOC104810882 Tarenaya hassleriana HOM05D006252 ORTHO05D007909 3.6e-59 231.9 148 81.1
Migut.D02295 Erythranthe guttata HOM05D006252 ORTHO05D007909 6.2e-59 231.1 148 81.8
Sabra09G0002100 Salix brachista HOM05D006252 ORTHO05D007909 6.2e-59 231.1 148 83.8
MSTRG.18705 Avicennia marina HOM05D006252 ORTHO05D007909 8.0e-59 230.7 143 86.0
Peaxi162Scf00983g00015 Petunia axillaris HOM05D006252 ORTHO05D007909 8.0e-59 230.7 147 81.6
PSO063G5667 Papaver somniferum HOM05D006252 ORTHO05D007909 1.0e-58 230.3 149 83.2
GSVIVG01031460001 Vitis vinifera HOM05D006252 ORTHO05D007909 1.0e-58 230.3 137 89.1
TWI75G0936 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 1.4e-58 229.9 147 83.0
AL5G23350 Arabidopsis lyrata HOM05D006252 ORTHO05D007909 1.8e-58 229.6 148 81.8
Cfa010288 Carpinus fangiana HOM05D006252 ORTHO05D007909 1.8e-58 229.6 149 82.6
ATR0043G002 Amborella trichopoda HOM05D006252 ORTHO05D007909 2.3e-58 229.2 137 88.3
Nitab4.5_0005665g0020 Nicotiana tabacum HOM05D006252 ORTHO05D007909 2.3e-58 229.2 147 81.6
PGR102G1698 Punica granatum HOM05D006252 ORTHO05D007909 2.3e-58 229.2 148 83.1
BcaB05g23061 Brassica carinata HOM05D006252 ORTHO05D007909 3.1e-58 228.8 148 82.4
BcaC09g49661 Brassica carinata HOM05D006252 ORTHO05D007909 3.1e-58 228.8 148 82.4
C01p34110 Brassica napus HOM05D006252 ORTHO05D007909 3.1e-58 228.8 148 82.4
BolC1t03381H Brassica oleracea HOM05D006252 ORTHO05D007909 3.1e-58 228.8 148 82.4
PSO339G3106 Papaver somniferum HOM05D006252 ORTHO05D007909 5.2e-58 228.0 149 81.9
CDE08G0788 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 8.9e-58 227.3 144 83.3
Nitab4.5_0000173g0140 Nicotiana tabacum HOM05D006252 ORTHO05D007909 8.9e-58 227.3 147 81.0
Sp5g16320 Schrenkiella parvula HOM05D006252 ORTHO05D007909 1.2e-57 226.9 148 81.1
A01p26720 Brassica napus HOM05D006252 ORTHO05D007909 1.5e-57 226.5 148 81.8
BraA01t02602Z Brassica rapa HOM05D006252 ORTHO05D007909 1.5e-57 226.5 148 81.8
Aqoxy1G01090 Aquilegia oxysepala HOM05D006252 ORTHO05D007909 2.6e-57 225.7 149 76.5
CDE02G0854 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 2.6e-57 225.7 144 82.6
FAN16G0084 Fragaria x ananassa HOM05D006252 ORTHO05D007909 2.6e-57 225.7 148 80.4
FAN21G1285 Fragaria x ananassa HOM05D006252 ORTHO05D007909 2.6e-57 225.7 148 80.4
Solyc11g066410.2 Solanum lycopersicum HOM05D006252 ORTHO05D007909 3.4e-57 225.3 148 77.7
Sopen11g026160 Solanum pennellii HOM05D006252 ORTHO05D007909 3.4e-57 225.3 148 77.7
FAN25G2218 Fragaria x ananassa HOM05D006252 ORTHO05D007909 5.8e-57 224.6 148 79.7
CARHR151120 Cardamine hirsuta HOM05D006252 ORTHO05D007909 7.5e-57 224.2 148 79.1
FvH4_3g30600 Fragaria vesca HOM05D006252 ORTHO05D007909 7.5e-57 224.2 148 79.7
FAN11G0619 Fragaria x ananassa HOM05D006252 ORTHO05D007909 7.5e-57 224.2 148 79.7
Aa31LG4G14200 Aethionema arabicum HOM05D006252 ORTHO05D007909 9.8e-57 223.8 148 77.7
PGSC0003DMG400000456 Solanum tuberosum HOM05D006252 ORTHO05D007909 1.3e-56 223.4 148 76.4
AT3G44890 Arabidopsis thaliana HOM05D006252 ORTHO05D007909 2.9e-56 222.2 148 78.4
VMungo1127G0830 Vigna mungo HOM05D006252 ORTHO05D007909 3.7e-56 221.9 134 86.6
Glyma.11G192500 Glycine max HOM05D006252 ORTHO05D007909 4.9e-56 221.5 134 86.6
Carub.0005s1063 Capsella rubella HOM05D006252 ORTHO05D007909 1.1e-55 220.3 148 77.0
MD03G1128600 Malus domestica HOM05D006252 ORTHO05D007909 1.1e-55 220.3 147 79.6
ECA233G2302 Erigeron canadensis HOM05D006252 ORTHO05D007909 1.4e-55 219.9 150 79.3
AUR62014977 Chenopodium quinoa HOM05D006252 ORTHO05D007909 1.9e-55 219.5 150 79.3
MD11G1148800 Malus domestica HOM05D006252 ORTHO05D007909 2.4e-55 219.2 147 79.6
arahy.Tifrunner.gnm1.ann1.Q498P0 Arachis hypogaea HOM05D006252 ORTHO05D007909 3.2e-55 218.8 146 80.1
Prupe.6G113200 Prunus persica HOM05D006252 ORTHO05D007909 4.1e-55 218.4 147 78.2
Lalb_Chr19g0136901 Lupinus albus HOM05D006252 ORTHO05D007909 5.4e-55 218.0 141 80.9
Phvul.011G086500 Phaseolus vulgaris HOM05D006252 ORTHO05D007909 5.4e-55 218.0 134 85.8
unitig_746.g26615 Utricularia gibba HOM05D006252 ORTHO05D007909 5.4e-55 218.0 138 84.1
arahy.Tifrunner.gnm1.ann1.4A8W5C Arachis hypogaea HOM05D006252 ORTHO05D007909 7.0e-55 217.6 135 85.2
EL10Ac9g22626 Beta vulgaris HOM05D006252 ORTHO05D007909 9.2e-55 217.2 149 79.9
AUR62029150 Chenopodium quinoa HOM05D006252 ORTHO05D007909 9.2e-55 217.2 150 78.0
Lalb_Chr03g0027721 Lupinus albus HOM05D006252 ORTHO05D007909 1.2e-54 216.9 135 83.0
SalBow6G6884 Salvia bowleyana HOM05D006252 ORTHO05D007909 1.2e-54 216.9 163 73.6
MBI02_g05768_MAGBIO Magnolia biondii HOM05D006252 ORTHO05D007909 2.7e-54 215.7 123 91.9
Glyma.12G081500 Glycine max HOM05D006252 ORTHO05D007909 3.5e-54 215.3 134 84.3
vmacro14388 Vaccinium macrocarpon HOM05D006252 ORTHO05D007909 6.0e-54 214.5 146 76.0
Ca_19323_v3 Cicer arietinum L. HOM05D006252 ORTHO05D007909 7.8e-54 214.2 145 76.6
HPP92_003365 Vanilla planifolia HOM05D006252 ORTHO05D007909 1.3e-53 213.4 134 82.1
Lj3g0021853 Lotus japonicus HOM05D006252 ORTHO05D007909 3.0e-53 212.2 139 81.3
Psat7g223760 Pisum sativum HOM05D006252 ORTHO05D007909 1.5e-52 209.9 141 78.0
Lj2A1006G34 Lonicera japonica HOM05D006252 ORTHO05D007909 1.9e-52 209.5 146 75.3
Medtr4g057210 Medicago truncatula HOM05D006252 ORTHO05D007909 1.9e-52 209.5 149 74.5
Hund01525 Selenicereus undatus HOM05D006252 ORTHO05D007909 1.9e-52 209.5 150 76.7
SGA_v2.0_scaffold277G46698 Striga asiatica HOM05D006252 ORTHO05D007909 1.9e-52 209.5 147 76.9
TPR.G36832 Trifolium pratense HOM05D006252 ORTHO05D007909 9.5e-52 207.2 146 73.3
Rhsim01G0210400 Rhododendron simsii HOM05D006252 ORTHO05D007909 3.1e-50 202.2 154 70.1
Zm00001eb258190 Zea mays HOM05D006252 ORTHO05D007909 7.1e-47 191.0 141 68.8
Sc21g0000330 Simmondsia chinensis HOM05D006252 ORTHO05D007909 1.1e-39 167.2 118 77.1
Mapoly0005s0034 Marchantia polymorpha HOM05D006252 ORTHO05D007909 3.2e-39 165.6 140 57.9
AagrBONN_evm.TU.Sc2ySwM_362.2261 Anthoceros agrestis HOM05D006252 ORTHO05D007909 2.3e-37 159.5 135 56.3
Thhalv10023194m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 7.3e-36 154.5 102 80.4
Pp3c2_34110 Physcomitrium patens HOM05D006252 ORTHO05D007909 4.0e-34 148.7 146 53.4
Pp3c2_34120 Physcomitrium patens HOM05D006252 ORTHO05D007909 4.0e-34 148.7 146 53.4
CBR_g36656 Chara braunii HOM05D006252 ORTHO05D007909 2.0e-33 146.4 135 54.1
Pp3c1_5300 Physcomitrium patens HOM05D006252 ORTHO05D007909 2.9e-32 142.5 136 54.4
Pp3c1_5320 Physcomitrium patens HOM05D006252 ORTHO05D007909 2.9e-32 142.5 136 54.4
SMO118G0111 Selaginella moellendorffii HOM05D006252 ORTHO05D007909 6.4e-32 141.4 140 52.1
Haze_24363 Corylus avellana HOM05D006252 ORTHO05D007909 2.7e-30 136.0 80 90.0
Actinidia24149 Actinidia chinensis HOM05D006252 ORTHO05D007909 5.6e-28 128.3 75 90.7
arahy.Tifrunner.gnm1.ann1.151HRH Arachis hypogaea HOM05D006252 ORTHO05D007909 4.0e-26 122.1 78 82.1
Oeu007732.1 Olea europaea HOM05D006252 ORTHO05D007909 9.0e-26 120.9 69 92.8
arahy.Tifrunner.gnm1.ann1.RBN82M Arachis hypogaea HOM05D006252 ORTHO05D007909 1.2e-22 110.5 78 78.2
Haze_24362 Corylus avellana HOM05D006252 ORTHO05D007909 2.1e-19 99.8 70 72.9
arahy.Tifrunner.gnm1.ann1.EI3IVH Arachis hypogaea HOM05D006252 ORTHO05D007909 5.3e-18 95.1 65 80.0
Oeu007731.1 Olea europaea HOM05D006252 ORTHO05D007909 6.9e-18 94.7 69 71.0
SEGI_37172 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 1.7e-16 90.1 64 73.4
Cre12.g556050 Chlamydomonas reinhardtii HOM05D006252 ORTHO05D007909 2.9e-16 89.4 140 36.4
SEGI_26717 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 3.8e-16 89.0 75 60.0
MCO03G269 Micromonas commoda HOM05D006252 ORTHO05D007909 1.0e-13 80.9 147 32.0
PRCOL_00001763 Prasinoderma coloniale HOM05D006252 ORTHO05D007909 5.1e-13 78.6 140 32.1
arahy.Tifrunner.gnm1.ann1.8D185T Arachis hypogaea HOM05D006252 ORTHO05D005826 1.3e-11 73.9 46 84.8
MELO3C029084.2 Cucumis melo HOM05D006252 ORTHO05D007909 1.6e-11 73.6 43 81.4
Zm00001eb258210 Zea mays HOM05D000274 ORTHO05D006772 4.9e-08 62.0 64 46.9
arahy.Tifrunner.gnm1.ann1.KIT0HG Arachis hypogaea HOM05D006252 ORTHO05D007909 1.9e-07 60.1 63 55.6
Ca_29226_v3 Cicer arietinum L. HOM05D006252 ORTHO05D008725 7.9e-06 54.7 124 32.3


User provided reference genes

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