Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv16223 Davidia involucrata HOM05D006963 ORTHO05D008783 4.1e-281 970.7 471 100.0
Atru.chr3.3511 Acer truncatum HOM05D006963 ORTHO05D008783 7.7e-131 471.5 389 63.0
Atru.chr3.3517 Acer truncatum HOM05D006963 ORTHO05D008783 7.7e-131 471.5 389 63.0
QL01p015018 Quercus lobata HOM05D006963 ORTHO05D008783 3.8e-130 469.2 379 64.6
TAR369G1146 Trochodendron aralioides HOM05D006963 ORTHO05D008783 5.0e-130 468.8 391 62.7
Cfa010289 Carpinus fangiana HOM05D006963 ORTHO05D008783 8.5e-130 468.0 385 63.4
CSS0000606 Camellia sinensis var. sinensis HOM05D006963 ORTHO05D008783 3.6e-128 462.6 409 62.6
Haze_23703 Corylus avellana HOM05D006963 ORTHO05D008783 3.6e-128 462.6 387 62.5
Ciclev10027698m.g Citrus clementina HOM05D006963 ORTHO05D008783 1.8e-127 460.3 395 59.7
Thecc.09G298600 Theobroma cacao HOM05D006963 ORTHO05D008783 3.1e-124 449.5 391 59.6
Rhsim01G0210700 Rhododendron simsii HOM05D006963 ORTHO05D008783 4.1e-124 449.1 417 60.4
CiPaw.13G122900 Carya illinoinensis HOM05D006963 ORTHO05D008783 3.5e-123 446.0 390 61.3
vmacro14391 Vaccinium macrocarpon HOM05D006963 ORTHO05D008783 1.3e-122 444.1 387 62.3
Cc01_g10290 Coffea canephora HOM05D006963 ORTHO05D008783 1.0e-119 434.5 387 58.4
MD03G1129000 Malus domestica HOM05D006963 ORTHO05D008783 1.4e-119 434.1 379 60.2
Prupe.6G112700 Prunus persica HOM05D006963 ORTHO05D008783 2.6e-118 429.9 378 59.3
Cc00_g22940 Coffea canephora HOM05D006963 ORTHO05D008783 4.4e-118 429.1 387 57.9
RcHm_v2.0_Chr5g0056861 Rosa chinensis HOM05D006963 ORTHO05D008783 4.4e-118 429.1 378 57.9
Lj2A1007T38 Lonicera japonica HOM05D006963 ORTHO05D008783 5.7e-118 428.7 383 61.4
FAN21G1782 Fragaria x ananassa HOM05D006963 ORTHO05D008783 3.7e-117 426.0 385 57.4
Manes.04G012900 Manihot esculenta HOM05D006963 ORTHO05D008783 4.9e-117 425.6 384 57.8
FvH4_3g30640 Fragaria vesca HOM05D006963 ORTHO05D008783 3.1e-116 422.9 378 57.4
TWI79G0599 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 2.7e-115 419.9 384 57.0
Sabra09G0002400 Salix brachista HOM05D006963 ORTHO05D008783 4.5e-115 419.1 384 57.6
Gohir.A13G223800 Gossypium hirsutum HOM05D006963 ORTHO05D008783 7.8e-115 418.3 392 54.8
Gohir.D13G228600 Gossypium hirsutum HOM05D006963 ORTHO05D008783 2.3e-114 416.8 392 55.1
Potri.009G005300 Populus trichocarpa HOM05D006963 ORTHO05D008783 8.6e-114 414.8 384 57.3
Gorai.013G259300 Gossypium raimondii HOM05D006963 ORTHO05D008783 1.1e-113 414.5 392 54.8
FAN16G1993 Fragaria x ananassa HOM05D006963 ORTHO05D008783 9.5e-113 411.4 378 56.6
Phvul.005G130400 Phaseolus vulgaris HOM05D006963 ORTHO05D008783 3.1e-111 406.4 394 55.6
Sabra04G0147300 Salix brachista HOM05D006963 ORTHO05D008783 5.8e-110 402.1 383 56.1
FAN11G1352 Fragaria x ananassa HOM05D006963 ORTHO05D008783 1.1e-108 397.9 430 50.5
MSTRG.18703 Avicennia marina HOM05D006963 ORTHO05D008783 1.9e-108 397.1 387 55.3
Duzib168G1517 Durio zibethinus HOM05D006963 ORTHO05D008783 1.9e-108 397.1 391 54.2
Lj3g0023334 Lotus japonicus HOM05D006963 ORTHO05D008783 2.4e-108 396.7 386 55.4
Cpa.g.sc1.5 Carica papaya HOM05D006963 ORTHO05D008783 5.4e-108 395.6 386 56.0
FAN25G3586 Fragaria x ananassa HOM05D006963 ORTHO05D008783 2.0e-107 393.7 448 49.3
TPR.G21046 Trifolium pratense HOM05D006963 ORTHO05D008783 2.0e-107 393.7 391 54.5
Lalb_Chr24g0394941 Lupinus albus HOM05D006963 ORTHO05D008783 7.8e-107 391.7 386 53.9
arahy.Tifrunner.gnm1.ann1.10EEU4 Arachis hypogaea HOM05D006963 ORTHO05D008783 1.3e-106 391.0 386 54.1
Glyma.12G178600 Glycine max HOM05D006963 ORTHO05D008783 1.3e-106 391.0 386 54.4
Ca_01706_v3 Cicer arietinum L. HOM05D006963 ORTHO05D008783 2.3e-106 390.2 383 53.5
arahy.Tifrunner.gnm1.ann1.5C5N68 Arachis hypogaea HOM05D006963 ORTHO05D008783 5.0e-106 389.0 386 54.1
Glyma.13G322000 Glycine max HOM05D006963 ORTHO05D008783 5.0e-106 389.0 385 54.3
Medtr2g084285 Medicago truncatula HOM05D006963 ORTHO05D008783 9.5e-105 384.8 386 52.8
Psat5g253040 Pisum sativum HOM05D006963 ORTHO05D008783 2.1e-104 383.6 390 52.8
PGSC0003DMG400007133 Solanum tuberosum HOM05D006963 ORTHO05D008783 4.7e-104 382.5 388 53.9
Sopen06g031250 Solanum pennellii HOM05D006963 ORTHO05D008783 6.8e-103 378.6 393 52.9
Solyc06g074810.3 Solanum lycopersicum HOM05D006963 ORTHO05D008783 2.6e-102 376.7 393 52.7
VMungo1080G0719 Vigna mungo HOM05D006963 ORTHO05D008783 2.6e-102 376.7 394 52.3
DCAR_018766 Daucus carota HOM05D006963 ORTHO05D008783 6.4e-101 372.1 381 53.5
SGA_v2.0_scaffold27G11571 Striga asiatica HOM05D006963 ORTHO05D008783 8.3e-101 371.7 394 50.3
MBI13_g24960_MAGBIO Magnolia biondii HOM05D006963 ORTHO05D008783 7.0e-100 368.6 383 54.0
ECA248G2820 Erigeron canadensis HOM05D006963 ORTHO05D008783 2.1e-99 367.1 369 55.8
Peaxi162Scf00114g00812 Petunia axillaris HOM05D006963 ORTHO05D008783 2.7e-99 366.7 386 53.9
CANSAT64G0534 Cannabis sativa HOM05D006963 ORTHO05D008783 1.3e-98 364.4 394 52.5
Sed0000311 Sechium edule HOM05D006963 ORTHO05D008783 3.9e-98 362.8 385 50.6
MELO3C026954.2 Cucumis melo HOM05D006963 ORTHO05D008783 2.8e-96 356.7 385 49.6
PSO063G0444 Papaver somniferum HOM05D006963 ORTHO05D008783 2.8e-96 356.7 390 51.0
CsaV3_6G014380 Cucumis sativus L. HOM05D006963 ORTHO05D008783 4.7e-96 355.9 384 49.2
PSO339G1013 Papaver somniferum HOM05D006963 ORTHO05D008783 4.7e-96 355.9 385 51.7
Aqoxy1G01103 Aquilegia oxysepala HOM05D006963 ORTHO05D008783 8.1e-96 355.1 385 50.6
Migut.D02292 Erythranthe guttata HOM05D006963 ORTHO05D008783 8.1e-96 355.1 370 53.2
Nitab4.5_0001163g0050 Nicotiana tabacum HOM05D006963 ORTHO05D008783 1.2e-94 351.3 432 47.5
Lsat_1_v5_gn_1_64681 Lactuca sativa HOM05D006963 ORTHO05D008783 7.5e-94 348.6 375 51.7
Nitab4.5_0003155g0020 Nicotiana tabacum HOM05D006963 ORTHO05D008783 3.2e-92 343.2 438 46.8
HanXRQChr11g0346501 Helianthus annuus HOM05D006963 ORTHO05D008783 1.7e-90 337.4 366 53.0
PGR119G1224 Punica granatum HOM05D006963 ORTHO05D008783 1.7e-90 337.4 378 51.6
Eucgr.J00389 Eucalyptus grandis HOM05D006963 ORTHO05D008783 5.6e-89 332.4 384 50.0
GSVIVG01031463001 Vitis vinifera HOM05D006963 ORTHO05D008783 9.5e-89 331.6 221 72.4
COL.COLO4_19194 Corchorus olitorius HOM05D006963 ORTHO05D008783 5.8e-86 322.4 315 54.6
AL4G21950 Arabidopsis lyrata HOM05D006963 ORTHO05D008783 9.9e-86 321.6 384 48.2
AUR62014974 Chenopodium quinoa HOM05D006963 ORTHO05D008783 1.7e-85 320.9 403 44.9
AUR62029159 Chenopodium quinoa HOM05D006963 ORTHO05D008783 1.9e-84 317.4 403 45.2
Sc06g0010790 Simmondsia chinensis HOM05D006963 ORTHO05D008783 9.2e-84 315.1 396 46.0
CARHR121070 Cardamine hirsuta HOM05D006963 ORTHO05D008783 1.0e-82 311.6 384 47.1
Aa31LG5G7960 Aethionema arabicum HOM05D006963 ORTHO05D008783 5.1e-82 309.3 384 46.6
ClCG02G021610 Citrullus lanatus HOM05D006963 ORTHO05D008783 9.6e-81 305.1 442 41.0
Oeu008360.1 Olea europaea HOM05D006963 ORTHO05D008783 9.9e-78 295.0 230 63.9
Ah.01g003350 Amaranthus hybridus HOM05D006963 ORTHO05D008783 5.4e-76 289.3 316 48.7
EL10Ac9g22623 Beta vulgaris HOM05D006963 ORTHO05D008783 1.2e-75 288.1 405 43.2
ATR0329G003 Amborella trichopoda HOM05D006963 ORTHO05D008783 2.4e-71 273.9 395 43.0
SEGI_31087 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 3.4e-70 270.0 387 43.2
Zm00001eb190880 Zea mays HOM05D006963 ORTHO05D008783 2.9e-69 266.9 381 41.5
CDE04G0208 Ceratophyllum demersum HOM05D006963 ORTHO05D008783 4.9e-69 266.2 387 39.8
Os02g0823800 Oryza sativa ssp. japonica HOM05D006963 ORTHO05D008783 2.4e-68 263.8 380 44.5
Hund08356 Selenicereus undatus HOM05D006963 ORTHO05D008783 3.0e-66 256.9 396 40.4
HPP92_025769 Vanilla planifolia HOM05D006963 ORTHO05D008783 5.8e-62 242.7 378 41.5
CAN.G1432.10 Capsicum annuum HOM05D006963 ORTHO05D008783 3.3e-57 226.9 299 45.2
TAR623G1253 Trochodendron aralioides HOM05D006963 ORTHO05D008783 3.4e-46 190.3 214 50.5
unitig_899.g15359 Utricularia gibba HOM05D006963 ORTHO05D008783 4.3e-41 173.3 367 35.7
Mapoly0011s0199 Marchantia polymorpha HOM05D006963 ORTHO05D008783 1.1e-39 168.7 300 34.3
arahy.Tifrunner.gnm1.ann1.WJC7CQ Arachis hypogaea HOM05D006963 ORTHO05D008783 1.4e-39 168.3 267 40.1
TAR623G0981 Trochodendron aralioides HOM05D006963 ORTHO05D008783 3.0e-34 150.6 86 80.2
SEGI_09379 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 6.7e-34 149.4 299 36.1
arahy.Tifrunner.gnm1.ann1.YZCM4H Arachis hypogaea HOM05D006963 ORTHO05D008783 1.5e-33 148.3 268 36.9
Pp3c19_6480 Physcomitrium patens HOM05D006963 ORTHO05D008783 7.2e-28 129.4 375 29.9
SEGI_19036 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 7.2e-28 129.4 101 62.4
CAN.G1432.11 Capsicum annuum HOM05D006963 ORTHO05D008783 3.9e-26 123.6 89 64.0
AagrBONN_evm.TU.Sc2ySwM_344.4789 Anthoceros agrestis HOM05D006963 ORTHO05D008783 1.3e-16 92.0 289 29.1
CBR_g8254 Chara braunii HOM05D006963 ORTHO05D008783 7.2e-12 76.3 183 30.1


User provided reference genes

Program Settings