Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv16214 Davidia involucrata HOM05D006101 ORTHO05D007422 6.5e-260 900.2 456 100.0
CSS0020443 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 7.6e-192 674.1 453 76.2
TAR636G3121 Trochodendron aralioides HOM05D006101 ORTHO05D007422 5.5e-182 641.3 465 70.3
Hma1.2p1_0051F.1_g029390 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 7.1e-182 641.0 433 74.6
GSVIVG01031479001 Vitis vinifera HOM05D006101 ORTHO05D007422 1.9e-179 632.9 458 70.5
CSS0026133 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 4.6e-173 611.7 411 76.2
CiPaw.13G123600 Carya illinoinensis HOM05D006101 ORTHO05D007422 1.3e-172 610.1 457 66.3
QL01p015279 Quercus lobata HOM05D006101 ORTHO05D007422 1.6e-170 603.2 456 66.9
Actinidia03696 Actinidia chinensis HOM05D006101 ORTHO05D007422 4.1e-169 598.6 458 69.2
Cfa010291 Carpinus fangiana HOM05D006101 ORTHO05D007422 5.0e-167 591.7 457 66.1
Lj2C1009G5 Lonicera japonica HOM05D006101 ORTHO05D007422 7.4e-163 577.8 496 64.1
Haze_23705 Corylus avellana HOM05D006101 ORTHO05D007422 1.6e-162 576.6 458 65.9
Potri.009G006200 Populus trichocarpa HOM05D006101 ORTHO05D007422 6.5e-159 564.7 461 63.8
Atru.chr3.3528 Acer truncatum HOM05D006101 ORTHO05D007422 1.4e-158 563.5 453 64.7
Manes.04G013700 Manihot esculenta HOM05D006101 ORTHO05D007422 1.9e-158 563.1 461 63.3
Rhsim01G0211100 Rhododendron simsii HOM05D006101 ORTHO05D007422 1.1e-153 547.4 458 65.7
CAN.G546.34 Capsicum annuum HOM05D006101 ORTHO05D007422 1.4e-153 547.0 462 60.0
TWI75G1238 Tripterygium wilfordii HOM05D006101 ORTHO05D007422 1.8e-153 546.6 457 61.7
Solyc11g066340.2 Solanum lycopersicum HOM05D006101 ORTHO05D007422 4.1e-153 545.4 461 59.2
PGSC0003DMG400000413 Solanum tuberosum HOM05D006101 ORTHO05D007422 1.2e-152 543.9 461 59.7
Cc01_g10370 Coffea canephora HOM05D006101 ORTHO05D007422 7.7e-152 541.2 462 61.0
Dinv29372 Davidia involucrata HOM05D006101 ORTHO05D007422 7.7e-152 541.2 325 83.7
Sopen11g026080 Solanum pennellii HOM05D006101 ORTHO05D007422 1.0e-151 540.8 461 58.8
MD11G1147300 Malus domestica HOM05D006101 ORTHO05D007422 1.3e-151 540.4 453 61.1
Thecc.09G350300 Theobroma cacao HOM05D006101 ORTHO05D007422 1.7e-151 540.0 463 61.6
Lsat_1_v5_gn_6_44300 Lactuca sativa HOM05D006101 ORTHO05D007422 4.7e-149 531.9 457 58.9
Nitab4.5_0000329g0130 Nicotiana tabacum HOM05D006101 ORTHO05D007422 1.8e-148 530.0 446 60.1
HanXRQChr13g0396251 Helianthus annuus HOM05D006101 ORTHO05D007422 2.3e-148 529.6 456 60.5
ClCG03G002470 Citrullus lanatus HOM05D006101 ORTHO05D007422 6.7e-148 528.1 457 58.9
MSTRG.21091 Avicennia marina HOM05D006101 ORTHO05D007422 9.7e-147 524.2 459 60.8
Duzib150G0708 Durio zibethinus HOM05D006101 ORTHO05D007422 1.3e-146 523.9 462 60.2
Prupe.6G111800 Prunus persica HOM05D006101 ORTHO05D007422 6.3e-146 521.5 457 60.0
CsaV3_1G013150 Cucumis sativus L. HOM05D006101 ORTHO05D007422 1.8e-145 520.0 457 58.4
THA.LOC104800579 Tarenaya hassleriana HOM05D006101 ORTHO05D007422 8.5e-143 511.1 456 56.6
RcHm_v2.0_Chr5g0056961 Rosa chinensis HOM05D006101 ORTHO05D007422 2.5e-142 509.6 456 59.6
Migut.D02287 Erythranthe guttata HOM05D006101 ORTHO05D007422 4.2e-142 508.8 461 59.4
Sed0008610 Sechium edule HOM05D006101 ORTHO05D007422 5.5e-142 508.4 456 57.7
Ciclev10028403m.g Citrus clementina HOM05D006101 ORTHO05D007422 9.4e-142 507.7 460 59.1
PSO063G0796 Papaver somniferum HOM05D006101 ORTHO05D007422 1.6e-141 506.9 464 58.2
FvH4_3g30770 Fragaria vesca HOM05D006101 ORTHO05D007422 3.6e-141 505.8 451 60.5
Peaxi162Scf00086g01114 Petunia axillaris HOM05D006101 ORTHO05D007422 4.7e-141 505.4 446 58.3
AT2G28130 Arabidopsis thaliana HOM05D006101 ORTHO05D007422 5.2e-140 501.9 461 54.9
PSO339G3309 Papaver somniferum HOM05D006101 ORTHO05D007422 5.2e-140 501.9 463 57.7
COL.COLO4_11107 Corchorus olitorius HOM05D006101 ORTHO05D007422 6.7e-140 501.5 459 58.2
FAN21G1086 Fragaria x ananassa HOM05D006101 ORTHO05D007422 2.0e-139 500.0 448 60.7
Gohir.A03G029500 Gossypium hirsutum HOM05D006101 ORTHO05D007422 4.4e-139 498.8 464 58.0
Gohir.D03G139000 Gossypium hirsutum HOM05D006101 ORTHO05D007422 4.4e-139 498.8 464 58.4
Carub.0004s0893 Capsella rubella HOM05D006101 ORTHO05D007422 9.7e-139 497.7 457 55.1
Oeu007313.2 Olea europaea HOM05D006101 ORTHO05D007422 3.7e-138 495.7 492 56.1
Gorai.003G145800 Gossypium raimondii HOM05D006101 ORTHO05D007422 6.3e-138 495.0 464 58.2
Phvul.011G085500 Phaseolus vulgaris HOM05D006101 ORTHO05D007422 1.1e-137 494.2 456 57.0
vmacro14396 Vaccinium macrocarpon HOM05D006101 ORTHO05D007422 2.4e-137 493.0 443 60.0
FAN11G1700 Fragaria x ananassa HOM05D002446 ORTHO05D007422 3.1e-137 492.7 457 59.5
Aqoxy1G01111 Aquilegia oxysepala HOM05D006101 ORTHO05D007422 1.6e-136 490.3 463 56.8
Lalb_Chr19g0136961 Lupinus albus HOM05D006101 ORTHO05D007422 2.7e-136 489.6 464 55.2
CANSAT56G2622 Cannabis sativa HOM05D006101 ORTHO05D007422 1.3e-135 487.3 438 59.1
FAN16G0923 Fragaria x ananassa HOM05D006101 ORTHO05D007422 2.9e-135 486.1 452 58.6
FAN25G1259 Fragaria x ananassa HOM05D006101 ORTHO05D007422 3.8e-135 485.7 457 58.2
Sp4g10940 Schrenkiella parvula HOM05D006101 ORTHO05D007422 1.2e-133 480.7 456 53.9
Eucgr.B03934 Eucalyptus grandis HOM05D006101 ORTHO05D007422 1.4e-132 477.2 458 57.2
PGR102G2892 Punica granatum HOM05D006101 ORTHO05D007422 4.0e-132 475.7 454 56.2
VMungo1127G1509 Vigna mungo HOM05D006101 ORTHO05D007422 8.8e-132 474.6 459 56.0
MELO3C004994.2 Cucumis melo HOM05D006101 ORTHO05D007422 1.2e-131 474.2 500 52.0
CARHR120970 Cardamine hirsuta HOM05D006101 ORTHO05D007422 5.7e-131 471.9 462 53.5
AL4G22020 Arabidopsis lyrata HOM05D006101 ORTHO05D007422 9.8e-131 471.1 461 52.7
BcaB02g10150 Brassica carinata HOM05D006101 ORTHO05D007422 2.8e-130 469.5 456 52.4
Nn2g13844 Nelumbo nucifera HOM05D006101 ORTHO05D007422 4.8e-130 468.8 402 59.7
Aa31LG5G8010 Aethionema arabicum HOM05D006101 ORTHO05D007422 1.1e-129 467.6 461 53.1
Glyma.11G193400 Glycine max HOM05D006101 ORTHO05D007422 9.1e-129 464.5 453 54.7
Lj3g0002990 Lotus japonicus HOM05D006101 ORTHO05D007422 2.7e-128 463.0 457 52.7
Sabra09G0003500 Salix brachista HOM05D006101 ORTHO05D007422 1.3e-127 460.7 384 61.5
SalBow4G3219 Salvia bowleyana HOM05D006101 ORTHO05D007422 6.5e-127 458.4 457 54.7
BcaC02g10947 Brassica carinata HOM05D006101 ORTHO05D007422 3.3e-126 456.1 457 52.1
SGA_v2.0_scaffold27G11561 Striga asiatica HOM05D006101 ORTHO05D007422 5.5e-126 455.3 462 54.5
Sc06g0010850 Simmondsia chinensis HOM05D006101 ORTHO05D007422 6.1e-125 451.8 457 52.5
Psat0s1387g0080 Pisum sativum HOM05D006101 ORTHO05D007422 8.9e-124 448.0 459 52.9
Ca_30122_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 1.2e-123 447.6 456 52.6
C04p23380 Brassica napus HOM05D006101 ORTHO05D007422 1.7e-122 443.7 457 51.6
BolC4t23840H Brassica oleracea HOM05D006101 ORTHO05D007422 1.7e-122 443.7 457 51.9
ECA233G2185 Erigeron canadensis HOM05D006101 ORTHO05D007422 8.3e-122 441.4 462 52.6
Medtr4g057493 Medicago truncatula HOM05D006101 ORTHO05D007422 2.0e-120 436.8 460 50.4
Ca_02469_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 3.8e-119 432.6 456 51.8
Thhalv10016576m.g Eutrema salsugineum HOM05D006101 ORTHO05D007422 2.5e-118 429.9 473 49.0
ATR0088G017 Amborella trichopoda HOM05D006101 ORTHO05D007422 5.6e-118 428.7 441 50.3
BraA07t29579Z Brassica rapa HOM05D006101 ORTHO05D007422 3.6e-117 426.0 456 49.1
A07p18660 Brassica napus HOM05D006101 ORTHO05D007422 1.0e-116 424.5 469 48.8
MBI13_g39328_MAGBIO Magnolia biondii HOM05D006101 ORTHO05D007422 5.8e-115 418.7 554 44.6
EL10Ac9g22610 Beta vulgaris HOM05D006101 ORTHO05D007422 7.8e-112 408.3 461 48.2
AUR62029180 Chenopodium quinoa HOM05D006101 ORTHO05D007422 2.3e-111 406.8 469 49.0
DCAR_018770 Daucus carota HOM05D006101 ORTHO05D007422 3.3e-110 402.9 367 58.0
CDE09G0605 Ceratophyllum demersum HOM05D006101 ORTHO05D007422 1.2e-109 401.0 458 48.3
Nitab4.5_0003880g0040 Nicotiana tabacum HOM05D006101 ORTHO05D007422 8.9e-100 368.2 467 46.3
Os01g0241100 Oryza sativa ssp. japonica HOM05D006101 ORTHO05D007422 9.9e-99 364.8 462 47.0
HPP92_020176 Vanilla planifolia HOM05D006101 ORTHO05D007422 6.6e-95 352.1 461 43.0
Hma1.2p1_0051F.1_g029400 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 8.4e-90 335.1 237 73.4
Hund08365 Selenicereus undatus HOM05D006101 ORTHO05D007422 2.7e-88 330.1 457 41.4
arahy.Tifrunner.gnm1.ann1.P58SHS Arachis hypogaea HOM05D006101 ORTHO05D007422 3.9e-87 326.2 469 42.0
Glyma.12G080600 Glycine max HOM05D006101 ORTHO05D007422 1.9e-86 323.9 374 48.9
unitig_747.g21973 Utricularia gibba HOM05D006101 ORTHO05D007422 2.5e-86 323.6 349 47.6
arahy.Tifrunner.gnm1.ann1.V5BWPF Arachis hypogaea HOM05D006101 ORTHO05D007422 1.2e-85 321.2 463 42.5
arahy.Tifrunner.gnm1.ann1.66BK9V Arachis hypogaea HOM05D006101 ORTHO05D007422 3.4e-83 313.2 458 41.3
Ah.01g014140 Amaranthus hybridus HOM05D006101 ORTHO05D007422 6.0e-80 302.4 479 38.4
AUR62014957 Chenopodium quinoa HOM05D006101 ORTHO05D007422 3.2e-73 280.0 378 42.1
Zm00001eb118850 Zea mays HOM05D006101 ORTHO05D007422 1.9e-70 270.8 347 45.0
HanXRQChr04g0111151 Helianthus annuus HOM05D006101 ORTHO05D007422 3.1e-68 263.5 294 52.0
SHI06228 Sapria himalayana HOM05D006101 ORTHO05D007422 9.7e-54 215.3 216 52.3
VMungo1215G2511 Vigna mungo HOM05D006101 ORTHO05D007422 4.5e-51 206.5 338 39.1
Pp3c4_7040 Physcomitrium patens HOM05D006101 ORTHO05D007422 7.4e-38 162.5 455 29.7
arahy.Tifrunner.gnm1.ann1.KM9ELV Arachis hypogaea HOM05D006101 ORTHO05D007422 4.8e-37 159.8 274 38.0
Actinidia20431 Actinidia chinensis HOM05D006101 ORTHO05D007422 7.0e-36 156.0 115 70.4
Mapoly0094s0062 Marchantia polymorpha HOM05D006101 ORTHO05D007422 1.9e-33 147.9 327 28.1
SEGI_30921 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 1.4e-31 141.7 217 36.9
arahy.Tifrunner.gnm1.ann1.PH2QKZ Arachis hypogaea HOM05D006101 ORTHO05D007422 1.5e-30 138.3 243 38.3
SHI06230 Sapria himalayana HOM05D006101 ORTHO05D007422 1.1e-28 132.1 141 48.9
arahy.Tifrunner.gnm1.ann1.EU9JMW Arachis hypogaea HOM05D006101 ORTHO05D007422 8.5e-26 122.5 175 42.3
SEGI_35146 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 2.1e-24 117.9 124 50.0
AagrBONN_evm.TU.Sc2ySwM_228.2481 Anthoceros agrestis HOM05D006101 ORTHO05D007422 4.5e-19 100.1 424 24.1
arahy.Tifrunner.gnm1.ann1.88XJ4T Arachis hypogaea HOM05D006101 ORTHO05D007422 1.5e-17 95.1 111 45.0
TPR.G36765 Trifolium pratense HOM05D006101 ORTHO05D007422 1.9e-17 94.7 86 55.8
arahy.Tifrunner.gnm1.ann1.AAV4SA Arachis hypogaea HOM05D006101 ORTHO05D007422 1.9e-09 68.2 108 42.6


User provided reference genes

Program Settings