Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv16196 Davidia involucrata HOM05D000433 ORTHO05D003991 1.2e-67 259.6 118 100.0
Dinv14256 Davidia involucrata HOM05D000433 ORTHO05D003991 2.1e-32 142.5 63 100.0
MBI04_g27076_MAGBIO Magnolia biondii HOM05D000433 ORTHO05D003991 1.6e-24 116.3 99 55.6
TAR383G0708 Trochodendron aralioides HOM05D000433 ORTHO05D003991 4.6e-24 114.8 62 75.8
Psat5g021920 Pisum sativum HOM05D000433 ORTHO05D003991 7.8e-24 114.0 62 77.4
Dinv27895 Davidia involucrata HOM05D000433 ORTHO05D003991 1.7e-23 112.8 111 50.5
GSVIVG01035636001 Vitis vinifera HOM05D000433 ORTHO05D003991 2.3e-23 112.5 62 79.0
Actinidia30272 Actinidia chinensis HOM05D000433 ORTHO05D003991 3.9e-23 111.7 116 50.0
Psat5g021960 Pisum sativum HOM05D000433 ORTHO05D003991 3.9e-23 111.7 62 74.2
Prupe.1G449200 Prunus persica HOM05D000433 ORTHO05D003991 3.9e-23 111.7 64 73.4
Hma1.2p1_0049F.1_g028710 Hydrangea macrophylla HOM05D000433 ORTHO05D003991 8.7e-23 110.5 112 46.4
Dinv38695 Davidia involucrata HOM05D000433 ORTHO05D003991 1.1e-22 110.2 62 71.0
PSO210G3307 Papaver somniferum HOM05D000433 ORTHO05D003991 1.1e-22 110.2 62 72.6
GSVIVG01035633001 Vitis vinifera HOM05D000433 ORTHO05D003991 1.1e-22 110.2 63 73.0
Glyma.04G083600 Glycine max HOM05D000433 ORTHO05D003991 1.5e-22 109.8 62 74.2
CSS0045124 Camellia sinensis var. sinensis HOM05D000433 ORTHO05D003991 1.9e-22 109.4 62 71.0
Medtr3g110195 Medicago truncatula HOM05D000433 ORTHO05D003991 1.9e-22 109.4 62 74.2
Thecc.09G043900 Theobroma cacao HOM05D000433 ORTHO05D003991 1.9e-22 109.4 63 73.0
Atru.chr7.2098 Acer truncatum HOM05D000433 ORTHO05D003991 3.3e-22 108.6 63 73.0
Gohir.1Z049422 Gossypium hirsutum HOM05D000433 ORTHO05D003991 4.3e-22 108.2 63 69.8
Gohir.A06G093600 Gossypium hirsutum HOM05D000433 ORTHO05D003991 4.3e-22 108.2 63 69.8
Gorai.010G107700 Gossypium raimondii HOM05D000433 ORTHO05D003991 4.3e-22 108.2 63 69.8
Dinv14259 Davidia involucrata HOM05D000433 ORTHO05D003991 7.3e-22 107.5 62 69.4
MBI04_g27075_MAGBIO Magnolia biondii HOM05D000433 ORTHO05D003991 7.3e-22 107.5 121 43.8
arahy.Tifrunner.gnm1.ann1.YWII14 Arachis hypogaea HOM05D000433 ORTHO05D003991 9.6e-22 107.1 61 73.8
Phvul.009G109200 Phaseolus vulgaris HOM05D000433 ORTHO05D003991 9.6e-22 107.1 61 72.1
CSS0015925 Camellia sinensis var. sinensis HOM05D000433 ORTHO05D003991 1.3e-21 106.7 62 67.7
CSS0016926 Camellia sinensis var. sinensis HOM05D000433 ORTHO05D003991 1.3e-21 106.7 62 67.7
Ciclev10010551m.g Citrus clementina HOM05D000433 ORTHO05D003991 1.6e-21 106.3 62 69.4
PGR044G1800 Punica granatum HOM05D000433 ORTHO05D003991 1.6e-21 106.3 75 61.3
Ca_15599_v3 Cicer arietinum L. HOM05D000433 ORTHO05D003991 2.1e-21 105.9 62 71.0
Glyma.06G085100 Glycine max HOM05D000433 ORTHO05D003991 2.1e-21 105.9 63 73.0
Atru.chr7.2110 Acer truncatum HOM05D000433 ORTHO05D003991 2.8e-21 105.5 63 71.4
Eucgr.C00545 Eucalyptus grandis HOM05D000433 ORTHO05D003991 2.8e-21 105.5 62 69.4
ATR0705G033 Amborella trichopoda HOM05D000433 ORTHO05D003991 3.6e-21 105.1 98 53.1
ATR0705G050 Amborella trichopoda HOM05D000433 ORTHO05D003991 3.6e-21 105.1 86 58.1
Gohir.D06G093300 Gossypium hirsutum HOM05D000433 ORTHO05D003991 3.6e-21 105.1 63 68.3
VMungo1309G2807 Vigna mungo HOM05D000433 ORTHO05D003991 3.6e-21 105.1 62 69.4
COL.COLO4_18651 Corchorus olitorius HOM05D000433 ORTHO05D003991 4.8e-21 104.8 63 71.4
Prupe.1G449300 Prunus persica HOM05D000433 ORTHO05D003991 4.8e-21 104.8 62 67.7
FAN15G3649 Fragaria x ananassa HOM05D000433 ORTHO05D003991 6.2e-21 104.4 67 65.7
Lj1g0020723 Lotus japonicus HOM05D000433 ORTHO05D003991 6.2e-21 104.4 62 66.1
Lj1g0023259 Lotus japonicus HOM05D000433 ORTHO05D003991 6.2e-21 104.4 62 66.1
Eucgr.C02923 Eucalyptus grandis HOM05D000433 ORTHO05D003991 8.1e-21 104.0 62 67.7
FvH4_2g35680 Fragaria vesca HOM05D000433 ORTHO05D003991 1.4e-20 103.2 67 64.2
Oeu057713.1 Olea europaea HOM05D000433 ORTHO05D003991 1.4e-20 103.2 62 69.4
MD08G1115000 Malus domestica HOM05D000433 ORTHO05D003991 1.8e-20 102.8 91 53.8
Potri.006G239402 Populus trichocarpa HOM05D000433 ORTHO05D003991 2.4e-20 102.4 62 66.1
Sabra18G0043500 Salix brachista HOM05D000433 ORTHO05D003991 2.4e-20 102.4 58 74.1
TWI34G0034 Tripterygium wilfordii HOM05D000433 ORTHO05D003991 2.4e-20 102.4 62 71.0
Atru.chr7.2096 Acer truncatum HOM05D000433 ORTHO05D003991 3.1e-20 102.1 62 67.7
FAN20G2984 Fragaria x ananassa HOM05D000433 ORTHO05D003991 3.1e-20 102.1 67 62.7
Phvul.009G109100 Phaseolus vulgaris HOM05D000433 ORTHO05D003991 3.1e-20 102.1 69 60.9
Prupe.1G449100 Prunus persica HOM05D000433 ORTHO05D003991 3.1e-20 102.1 62 67.7
TPR.G1382 Trifolium pratense HOM05D000433 ORTHO05D003991 3.1e-20 102.1 72 66.7
Duzib168G1402 Durio zibethinus HOM05D000433 ORTHO05D003991 4.0e-20 101.7 63 66.7
Os06g0162550 Oryza sativa ssp. japonica HOM05D000433 ORTHO05D003991 4.0e-20 101.7 116 43.1
Migut.A00213 Erythranthe guttata HOM05D000433 ORTHO05D003991 6.9e-20 100.9 94 54.3
Gohir.D05G049100 Gossypium hirsutum HOM05D000433 ORTHO05D003991 9.0e-20 100.5 80 53.8
Gorai.009G050300 Gossypium raimondii HOM05D000433 ORTHO05D003991 9.0e-20 100.5 80 56.2
Manes.16G076200 Manihot esculenta HOM05D000433 ORTHO05D003991 9.0e-20 100.5 61 65.6
Sabra18G0043600 Salix brachista HOM05D000433 ORTHO05D003991 9.0e-20 100.5 58 72.4
GSVIVG01035632001 Vitis vinifera HOM05D000433 ORTHO05D003991 9.0e-20 100.5 63 71.4
Cpa.g.sc7.267 Carica papaya HOM05D000433 ORTHO05D003991 1.2e-19 100.1 62 64.5
FvH4_2g35682 Fragaria vesca HOM05D000433 ORTHO05D003991 1.2e-19 100.1 62 66.1
HanXRQChr13g0401851 Helianthus annuus HOM05D000433 ORTHO05D003991 1.2e-19 100.1 62 67.7
HanXRQChr13g0401881 Helianthus annuus HOM05D000433 ORTHO05D003991 1.2e-19 100.1 62 67.7
MD08G1114700 Malus domestica HOM05D000433 ORTHO05D003991 1.5e-19 99.8 91 52.7
MD15G1094100 Malus domestica HOM05D000433 ORTHO05D003991 1.5e-19 99.8 110 45.5
Oeu057715.1 Olea europaea HOM05D000433 ORTHO05D003991 2.6e-19 99.0 62 66.1
Haze_21881 Corylus avellana HOM05D000433 ORTHO05D003991 3.4e-19 98.6 62 66.1
DCAR_003120 Daucus carota HOM05D000433 ORTHO05D003991 3.4e-19 98.6 62 67.7
Lsat_1_v5_gn_6_24381 Lactuca sativa HOM05D000433 ORTHO05D003991 3.4e-19 98.6 62 64.5
TPR.G1375 Trifolium pratense HOM05D000433 ORTHO05D003991 3.4e-19 98.6 68 63.2
Gohir.D05G049000 Gossypium hirsutum HOM05D000433 ORTHO05D003991 4.5e-19 98.2 80 55.0
Potri.018G043500 Populus trichocarpa HOM05D000433 ORTHO05D003991 4.5e-19 98.2 58 67.2
Sabra18G0043100 Salix brachista HOM05D000433 ORTHO05D003991 4.5e-19 98.2 58 67.2
TPR.G35821 Trifolium pratense HOM05D000433 ORTHO05D003991 4.5e-19 98.2 62 69.4
Actinidia30273 Actinidia chinensis HOM05D000433 ORTHO05D003991 5.8e-19 97.8 62 67.7
Glyma.06G085000 Glycine max HOM05D000433 ORTHO05D003991 5.8e-19 97.8 69 59.4
Potri.018G042650 Populus trichocarpa HOM05D000433 ORTHO05D003991 5.8e-19 97.8 62 64.5
ECA233G3103 Erigeron canadensis HOM05D000433 ORTHO05D003991 7.6e-19 97.4 62 62.9
Gohir.A05G047200 Gossypium hirsutum HOM05D000433 ORTHO05D003991 7.6e-19 97.4 81 55.6
Os09g0321200 Oryza sativa ssp. japonica HOM05D000433 ORTHO05D003991 7.6e-19 97.4 61 68.9
HPP92_006323 Vanilla planifolia HOM05D000433 ORTHO05D003991 7.6e-19 97.4 62 66.1
HPP92_027883 Vanilla planifolia HOM05D000433 ORTHO05D003991 7.6e-19 97.4 62 66.1
Cfa001732 Carpinus fangiana HOM05D000433 ORTHO05D003991 9.9e-19 97.1 62 64.5
Solyc08g066720.3 Solanum lycopersicum HOM05D000433 ORTHO05D003991 9.9e-19 97.1 61 65.6
Sopen08g020690 Solanum pennellii HOM05D000433 ORTHO05D003991 9.9e-19 97.1 61 65.6
VMungo1309G1574 Vigna mungo HOM05D000433 ORTHO05D003991 9.9e-19 97.1 69 58.0
arahy.Tifrunner.gnm1.ann1.I9LXD5 Arachis hypogaea HOM05D000433 ORTHO05D003991 1.3e-18 96.7 62 62.9
Dinv14257 Davidia involucrata HOM05D000433 ORTHO05D003991 1.3e-18 96.7 62 62.9
Sed0013565 Sechium edule HOM05D000433 ORTHO05D003991 1.3e-18 96.7 63 61.9
DCAR_003121 Daucus carota HOM05D000433 ORTHO05D003991 2.2e-18 95.9 62 64.5
Potri.006G239300 Populus trichocarpa HOM05D000433 ORTHO05D003991 2.2e-18 95.9 58 67.2
Migut.E01520 Erythranthe guttata HOM05D000433 ORTHO05D003991 2.9e-18 95.5 112 42.9
Lj1g0021560 Lotus japonicus HOM05D000433 ORTHO05D003991 2.9e-18 95.5 62 66.1
MD15G1094300 Malus domestica HOM05D000433 ORTHO05D003991 2.9e-18 95.5 63 66.7
Manes.03G058000 Manihot esculenta HOM05D000433 ORTHO05D003991 2.9e-18 95.5 63 65.1
Zm00001eb375850 Zea mays HOM05D000433 ORTHO05D003991 2.9e-18 95.5 100 44.0
Glyma.04G083500 Glycine max HOM05D000433 ORTHO05D003991 3.8e-18 95.1 62 64.5
Manes.03G057900 Manihot esculenta HOM05D000433 ORTHO05D003991 3.8e-18 95.1 63 63.5
Potri.006G239200 Populus trichocarpa HOM05D000433 ORTHO05D003991 3.8e-18 95.1 58 67.2
TWI34G1621 Tripterygium wilfordii HOM05D000433 ORTHO05D003991 3.8e-18 95.1 62 64.5
HPP92_009988 Vanilla planifolia HOM05D000433 ORTHO05D003991 3.8e-18 95.1 62 61.3
Potri.018G043000 Populus trichocarpa HOM05D000433 ORTHO05D003991 4.9e-18 94.7 58 65.5
ECA246G2703 Erigeron canadensis HOM05D000433 ORTHO05D003991 6.4e-18 94.4 60 61.7
MD08G1115100 Malus domestica HOM05D000433 ORTHO05D003991 6.4e-18 94.4 63 61.9
Oeu036367.1 Olea europaea HOM05D000433 ORTHO05D003991 6.4e-18 94.4 62 62.9
Sabra18G0043200 Salix brachista HOM05D000433 ORTHO05D003991 6.4e-18 94.4 58 63.8
Sabra06G0187000 Salix brachista HOM05D000433 ORTHO05D003991 8.4e-18 94.0 58 67.2
arahy.Tifrunner.gnm1.ann1.66FUHL Arachis hypogaea HOM05D000433 ORTHO05D003991 1.1e-17 93.6 64 57.8
Peaxi162Scf00323g00925 Petunia axillaris HOM05D000433 ORTHO05D003991 1.1e-17 93.6 61 63.9
TWI34G1265 Tripterygium wilfordii HOM05D000433 ORTHO05D003991 1.4e-17 93.2 62 64.5
Haze_16805 Corylus avellana HOM05D000433 ORTHO05D003991 1.9e-17 92.8 60 65.0
ECA246G0302 Erigeron canadensis HOM05D000433 ORTHO05D003991 2.4e-17 92.4 60 61.7
Eucgr.C02920 Eucalyptus grandis HOM05D000433 ORTHO05D003991 2.4e-17 92.4 62 62.9
Lj7C703T4 Lonicera japonica HOM05D000433 ORTHO05D003991 2.4e-17 92.4 62 61.3
FvH4_2g35670 Fragaria vesca HOM05D000433 ORTHO05D003991 3.2e-17 92.0 80 53.8
Nitab4.5_0007838g0050 Nicotiana tabacum HOM05D000433 ORTHO05D003991 3.2e-17 92.0 85 50.6
Sopen11g028910 Solanum pennellii HOM05D000433 ORTHO05D003991 3.2e-17 92.0 62 59.7
PGSC0003DMG400004311 Solanum tuberosum HOM05D000433 ORTHO05D003991 3.2e-17 92.0 61 60.7
TWI34G0984 Tripterygium wilfordii HOM05D000433 ORTHO05D003991 4.2e-17 91.7 62 64.5
CAN.G335.8 Capsicum annuum HOM05D000433 ORTHO05D003991 5.4e-17 91.3 61 57.4
FvH4_5g00520 Fragaria vesca HOM05D000433 ORTHO05D003991 5.4e-17 91.3 67 56.7
FAN08G0103 Fragaria x ananassa HOM05D000433 ORTHO05D003991 5.4e-17 91.3 67 56.7
FAN13G2375 Fragaria x ananassa HOM05D000433 ORTHO05D003991 5.4e-17 91.3 67 56.7
Peaxi162Scf00227g00019 Petunia axillaris HOM05D000433 ORTHO05D003991 5.4e-17 91.3 62 59.7
Migut.E01521 Erythranthe guttata HOM05D000433 ORTHO05D003991 7.1e-17 90.9 76 53.9
FAN20G2606 Fragaria x ananassa HOM05D000433 ORTHO05D003991 7.1e-17 90.9 79 54.4
ClCG00G005190 Citrullus lanatus HOM05D000433 ORTHO05D003991 9.3e-17 90.5 64 56.2
ClCG11G015170 Citrullus lanatus HOM05D000433 ORTHO05D003991 9.3e-17 90.5 64 56.2
CANSAT25G0153 Cannabis sativa HOM05D000433 ORTHO05D003991 1.2e-16 90.1 76 53.9
Manes.03G057750 Manihot esculenta HOM05D000433 ORTHO05D003991 1.2e-16 90.1 62 56.5
Zm00001eb309770 Zea mays HOM05D000433 ORTHO05D003991 1.2e-16 90.1 60 63.3
Cc08_g09430 Coffea canephora HOM05D000433 ORTHO05D003991 1.6e-16 89.7 62 56.5
RcHm_v2.0_Chr6g0306131 Rosa chinensis HOM05D000433 ORTHO05D003991 2.7e-16 89.0 64 60.9
Peaxi162Scf00227g00007 Petunia axillaris HOM05D000433 ORTHO05D003991 3.5e-16 88.6 61 57.4
Peaxi162Scf00323g00934 Petunia axillaris HOM05D000433 ORTHO05D003991 3.5e-16 88.6 74 52.7
FAN18G1489 Fragaria x ananassa HOM05D000433 ORTHO05D003991 4.6e-16 88.2 67 55.2
Nitab4.5_0009835g0020 Nicotiana tabacum HOM05D000433 ORTHO05D003991 6.0e-16 87.8 85 49.4
MELO3C003462.2 Cucumis melo HOM05D000433 ORTHO05D003991 7.9e-16 87.4 64 56.2
Lsat_1_v5_gn_3_26280 Lactuca sativa HOM05D000433 ORTHO05D003991 7.9e-16 87.4 61 55.7
CsaV3_3G048570 Cucumis sativus L. HOM05D000433 ORTHO05D003991 1.3e-15 86.7 64 54.7
ECA246G4238 Erigeron canadensis HOM05D000433 ORTHO05D003991 1.3e-15 86.7 61 57.4
Lj1g0017698 Lotus japonicus HOM05D000433 ORTHO05D003991 1.3e-15 86.7 48 70.8
Cc08_g09420 Coffea canephora HOM05D000433 ORTHO05D003991 1.8e-15 86.3 62 59.7
CAN.G309.89 Capsicum annuum HOM05D000433 ORTHO05D003991 3.9e-15 85.1 62 56.5
Solyc11g071227.1 Solanum lycopersicum HOM05D000433 ORTHO05D003991 3.9e-15 85.1 62 56.5
TAR383G1023 Trochodendron aralioides HOM05D000433 ORTHO05D003991 3.9e-15 85.1 46 76.1
Cpa.g.sc522.4 Carica papaya HOM05D000433 ORTHO05D003991 5.1e-15 84.7 54 64.8
PGSC0003DMG400004312 Solanum tuberosum HOM05D000433 ORTHO05D003991 6.7e-15 84.3 61 57.4
Os08g0371608 Oryza sativa ssp. japonica HOM05D000433 ORTHO05D003991 2.5e-14 82.4 82 51.2
Eucgr.C02921 Eucalyptus grandis HOM05D000433 ORTHO05D003991 3.3e-14 82.0 77 53.2
Lsat_1_v5_gn_3_26320 Lactuca sativa HOM05D000433 ORTHO05D003991 4.3e-14 81.6 60 53.3
CAN.G792.2 Capsicum annuum HOM05D000433 ORTHO05D003991 1.3e-13 80.1 86 43.0
CSS0012936 Camellia sinensis var. sinensis HOM05D000433 ORTHO05D003991 2.1e-13 79.3 54 63.0
Sabra18G0043000 Salix brachista HOM05D000433 ORTHO05D003991 1.1e-12 77.0 49 63.3
HPP92_010038 Vanilla planifolia HOM05D000433 ORTHO05D003991 2.4e-12 75.9 46 63.0
Mapoly0056s0019 Marchantia polymorpha HOM05D000433 ORTHO05D003991 2.0e-11 72.8 47 63.8
AagrBONN_evm.TU.Sc2ySwM_117.3901 Anthoceros agrestis HOM05D000433 ORTHO05D003991 5.8e-11 71.2 62 45.2
AagrBONN_evm.TU.Sc2ySwM_344.3719 Anthoceros agrestis HOM05D000433 ORTHO05D003991 5.8e-11 71.2 61 49.2
AagrBONN_evm.TU.Sc2ySwM_344.3717 Anthoceros agrestis HOM05D000433 ORTHO05D003991 1.3e-10 70.1 54 55.6
AagrBONN_evm.TU.Sc2ySwM_344.3718 Anthoceros agrestis HOM05D000433 ORTHO05D003991 1.7e-10 69.7 54 53.7
arahy.Tifrunner.gnm1.ann1.I05T7U Arachis hypogaea HOM05D000433 ORTHO05D003991 4.9e-10 68.2 61 54.1
Mapoly0012s0198 Marchantia polymorpha HOM05D000433 ORTHO05D003991 1.1e-09 67.0 62 45.2
Thecc.09G044100 Theobroma cacao HOM05D000433 ORTHO05D003991 1.1e-09 67.0 36 69.4
Sabra18G0043300 Salix brachista HOM05D000433 ORTHO05D013160 1.9e-09 66.2 49 59.2
Mapoly0012s0197 Marchantia polymorpha HOM05D000433 ORTHO05D003991 2.4e-09 65.9 64 43.8
FAN27G2738 Fragaria x ananassa HOM05D000433 ORTHO05D022592 5.5e-09 64.7 67 47.8
Thecc.09G043800 Theobroma cacao HOM05D000433 ORTHO05D003991 5.5e-09 64.7 111 35.1
Nitab4.5_0009835g0010 Nicotiana tabacum HOM05D000433 ORTHO05D003991 7.1e-09 64.3 62 45.2
SMO244G0030 Selaginella moellendorffii HOM05D000433 ORTHO05D003991 9.3e-09 63.9 50 54.0
Eucgr.C02919 Eucalyptus grandis HOM05D000433 ORTHO05D003991 3.9e-07 58.5 33 66.7
HanXRQChr17g0538661 Helianthus annuus HOM05D000433 ORTHO05D003991 6.7e-07 57.8 61 44.3
Mapoly0066s0017 Marchantia polymorpha HOM05D000433 ORTHO05D003991 1.9e-06 56.2 42 54.8
Pp3c22_6380 Physcomitrium patens HOM05D000433 ORTHO05D000443 3.3e-06 55.5 53 41.5
Lalb_Chr19g0132241 Lupinus albus HOM05D000433 ORTHO05D000443 7.4e-06 54.3 63 41.3
Mapoly0149s0036 Marchantia polymorpha HOM05D000433 ORTHO05D000443 7.4e-06 54.3 68 36.8
Aqoxy2G00193 Aquilegia oxysepala HOM05D000433 ORTHO05D000443 9.6e-06 53.9 63 42.9
Peaxi162Scf00953g00218 Petunia axillaris HOM05D000433 ORTHO05D000443 9.6e-06 53.9 63 39.7
SMO004G0032 Selaginella moellendorffii HOM05D000433 ORTHO05D000443 9.6e-06 53.9 53 43.4
SMO361G0560 Selaginella moellendorffii HOM05D000433 ORTHO05D000443 9.6e-06 53.9 53 43.4
Hund14182 Selenicereus undatus HOM05D000433 ORTHO05D000443 9.6e-06 53.9 63 39.7


User provided reference genes

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