Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv16188 Davidia involucrata HOM05D004972 ORTHO05D006309 8.5e-128 460.3 225 100.0
Actinidia15243 Actinidia chinensis HOM05D004972 ORTHO05D006309 7.2e-111 404.1 225 87.6
Actinidia36689 Actinidia chinensis HOM05D004972 ORTHO05D006309 7.2e-111 404.1 225 87.6
Actinidia14945 Actinidia chinensis HOM05D004972 ORTHO05D006309 2.1e-110 402.5 225 87.6
Dinv05881 Davidia involucrata HOM05D004972 ORTHO05D006309 8.8e-109 397.1 224 87.5
Manes.06G062200 Manihot esculenta HOM05D004972 ORTHO05D006309 2.6e-108 395.6 225 84.9
Hma1.2p1_0114F.1_g055290 Hydrangea macrophylla HOM05D004972 ORTHO05D006309 3.4e-108 395.2 225 86.7
CSS0013445 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 1.3e-107 393.3 226 86.7
CSS0024462 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 1.3e-107 393.3 226 86.7
Nitab4.5_0004692g0050 Nicotiana tabacum HOM05D004972 ORTHO05D006309 3.7e-107 391.7 223 85.2
GSVIVG01011786001 Vitis vinifera HOM05D004972 ORTHO05D006309 3.1e-106 388.7 225 85.3
Rhsim09G0068400 Rhododendron simsii HOM05D004972 ORTHO05D006309 7.0e-106 387.5 225 83.1
Peaxi162Scf00205g00614 Petunia axillaris HOM05D004972 ORTHO05D006309 1.0e-104 383.6 225 82.7
COL.COLO4_10156 Corchorus olitorius HOM05D004972 ORTHO05D006309 2.3e-104 382.5 225 83.6
Migut.L00755 Erythranthe guttata HOM05D004972 ORTHO05D006309 2.3e-104 382.5 225 82.2
MD16G1031300 Malus domestica HOM05D004972 ORTHO05D006309 3.8e-104 381.7 225 81.3
Sopen05g004230 Solanum pennellii HOM05D004972 ORTHO05D006309 5.0e-104 381.3 225 82.2
TAR629G1532 Trochodendron aralioides HOM05D004972 ORTHO05D006309 5.0e-104 381.3 225 84.4
Solyc05g008400.4 Solanum lycopersicum HOM05D004972 ORTHO05D006309 8.6e-104 380.6 225 81.8
FAN07G2072 Fragaria x ananassa HOM05D004972 ORTHO05D006309 1.5e-103 379.8 225 81.8
CAN.G1693.8 Capsicum annuum HOM05D004972 ORTHO05D006309 1.9e-103 379.4 225 82.7
PGSC0003DMG400030511 Solanum tuberosum HOM05D004972 ORTHO05D006309 1.9e-103 379.4 225 81.8
Ciclev10016597m.g Citrus clementina HOM05D004972 ORTHO05D006309 2.5e-103 379.0 225 82.2
Lj6C749G10 Lonicera japonica HOM05D004972 ORTHO05D006309 5.6e-103 377.9 224 83.9
MD13G1028600 Malus domestica HOM05D004972 ORTHO05D006309 7.2e-103 377.5 225 81.3
Cc11_g09090 Coffea canephora HOM05D004972 ORTHO05D006309 9.5e-103 377.1 225 84.0
RcHm_v2.0_Chr4g0433731 Rosa chinensis HOM05D004972 ORTHO05D006309 9.5e-103 377.1 225 80.4
Oeu044327.1 Olea europaea HOM05D004972 ORTHO05D006309 2.1e-102 375.9 225 83.1
Thecc.04G114900 Theobroma cacao HOM05D004972 ORTHO05D006309 2.1e-102 375.9 225 82.2
Cfa008573 Carpinus fangiana HOM05D004972 ORTHO05D006309 2.8e-102 375.6 225 83.1
Eucgr.G02212 Eucalyptus grandis HOM05D004972 ORTHO05D006309 3.6e-102 375.2 225 81.3
Gohir.D12G057200 Gossypium hirsutum HOM05D004972 ORTHO05D006309 3.6e-102 375.2 225 82.2
Potri.010G115800 Populus trichocarpa HOM05D004972 ORTHO05D006309 3.6e-102 375.2 225 81.3
FAN12G1431 Fragaria x ananassa HOM05D004972 ORTHO05D006309 1.0e-101 373.6 225 81.3
FAN12G3562 Fragaria x ananassa HOM05D004972 ORTHO05D006309 1.0e-101 373.6 225 81.3
SGA_v2.0_scaffold50G18531 Striga asiatica HOM05D004972 ORTHO05D006309 2.3e-101 372.5 225 80.4
FvH4_4g26160 Fragaria vesca HOM05D004972 ORTHO05D006309 4.0e-101 371.7 225 80.9
FAN22G0152 Fragaria x ananassa HOM05D004972 ORTHO05D006309 5.2e-101 371.3 225 80.0
THA.LOC104825471 Tarenaya hassleriana HOM05D004972 ORTHO05D006309 8.9e-101 370.5 225 80.0
MSTRG.882 Avicennia marina HOM05D004972 ORTHO05D006309 1.5e-100 369.8 225 80.4
CiPaw.05G247000 Carya illinoinensis HOM05D004972 ORTHO05D006309 2.0e-100 369.4 225 79.6
FAN17G1326 Fragaria x ananassa HOM05D004972 ORTHO05D006309 2.0e-100 369.4 225 80.0
Gohir.A12G057400 Gossypium hirsutum HOM05D004972 ORTHO05D006309 4.4e-100 368.2 225 80.9
CANSAT01G2336 Cannabis sativa HOM05D004972 ORTHO05D006309 7.5e-100 367.5 225 79.1
DCAR_030202 Daucus carota HOM05D004972 ORTHO05D006309 7.5e-100 367.5 226 78.8
Sc04g0005680 Simmondsia chinensis HOM05D004972 ORTHO05D006309 1.4e-98 363.2 226 79.6
CsaV3_5G034860 Cucumis sativus L. HOM05D004972 ORTHO05D006309 1.8e-98 362.8 225 78.7
SalBow8G2598 Salvia bowleyana HOM05D004972 ORTHO05D006309 4.1e-98 361.7 226 79.6
CiPaw.06G013900 Carya illinoinensis HOM05D004972 ORTHO05D006309 5.4e-98 361.3 227 79.3
QL01p002347 Quercus lobata HOM05D004972 ORTHO05D006309 7.0e-98 360.9 279 68.1
Gohir.A07G173000 Gossypium hirsutum HOM05D004972 ORTHO05D006309 1.6e-97 359.8 225 79.6
AUR62014195 Chenopodium quinoa HOM05D004972 ORTHO05D006309 2.0e-97 359.4 225 78.2
Prupe.1G321700 Prunus persica HOM05D004972 ORTHO05D006309 2.0e-97 359.4 225 78.7
TWI79G0317 Tripterygium wilfordii HOM05D004972 ORTHO05D006309 2.0e-97 359.4 225 80.4
Atru.chr11.981 Acer truncatum HOM05D004972 ORTHO05D006309 2.7e-97 359.0 225 77.8
Gorai.001G201700 Gossypium raimondii HOM05D004972 ORTHO05D006309 3.5e-97 358.6 225 79.6
Sed0026570 Sechium edule HOM05D004972 ORTHO05D006309 5.9e-97 357.8 225 77.8
Gohir.D07G180500 Gossypium hirsutum HOM05D004972 ORTHO05D006309 7.8e-97 357.5 225 79.1
Nitab4.5_0004092g0040 Nicotiana tabacum HOM05D004972 ORTHO05D006309 8.6e-96 354.0 266 69.2
Carub.0006s1141 Capsella rubella HOM05D004972 ORTHO05D006309 2.5e-95 352.4 225 76.0
Nn2g14330 Nelumbo nucifera HOM05D004972 ORTHO05D006309 2.5e-95 352.4 225 78.2
AT5G13240 Arabidopsis thaliana HOM05D004972 ORTHO05D006309 4.3e-95 351.7 225 76.4
MBI07_g18719_MAGBIO Magnolia biondii HOM05D004972 ORTHO05D006309 1.2e-94 350.1 228 76.8
AL6G23850 Arabidopsis lyrata HOM05D004972 ORTHO05D006309 2.8e-94 349.0 225 76.0
vmacro01431 Vaccinium macrocarpon HOM05D004972 ORTHO05D006309 3.6e-94 348.6 208 81.7
HanXRQChr08g0212881 Helianthus annuus HOM05D004972 ORTHO05D006309 4.7e-94 348.2 225 73.8
EL10Ac6g14241 Beta vulgaris HOM05D004972 ORTHO05D006309 8.0e-94 347.4 225 75.1
ECA233G6099 Erigeron canadensis HOM05D004972 ORTHO05D006309 1.0e-93 347.1 225 76.0
Thhalv10014602m.g Eutrema salsugineum HOM05D004972 ORTHO05D006309 1.8e-93 346.3 225 75.1
SGA_v2.0_scaffold38G15047 Striga asiatica HOM05D004972 ORTHO05D006309 3.1e-93 345.5 225 73.8
Duzib133G0650 Durio zibethinus HOM05D004972 ORTHO05D006309 6.8e-93 344.4 197 85.8
Lsat_1_v5_gn_8_42761 Lactuca sativa HOM05D004972 ORTHO05D006309 6.8e-93 344.4 225 73.8
A10p24970 Brassica napus HOM05D004972 ORTHO05D006309 8.9e-93 344.0 225 74.2
BraA10t44559Z Brassica rapa HOM05D004972 ORTHO05D006309 2.0e-92 342.8 225 73.8
CARHR200210 Cardamine hirsuta HOM05D004972 ORTHO05D006309 2.0e-92 342.8 227 75.3
Phvul.007G035700 Phaseolus vulgaris HOM05D004972 ORTHO05D006309 2.0e-92 342.8 225 74.2
Hund24992 Selenicereus undatus HOM05D004972 ORTHO05D006309 2.0e-92 342.8 260 68.1
BcaC04g19133 Brassica carinata HOM05D004972 ORTHO05D006309 2.6e-92 342.4 225 73.8
BolC9t59224H Brassica oleracea HOM05D004972 ORTHO05D006309 2.6e-92 342.4 225 73.8
VMungo0720G3073 Vigna mungo HOM05D004972 ORTHO05D006309 3.4e-92 342.0 225 73.8
Cpa.g.sc65.108 Carica papaya HOM05D004972 ORTHO05D006309 4.4e-92 341.7 197 83.2
C09p63840 Brassica napus HOM05D004972 ORTHO05D006309 5.8e-92 341.3 225 73.3
Lj5g0002039 Lotus japonicus HOM05D004972 ORTHO05D006309 7.5e-92 340.9 225 73.3
HanXRQChr07g0189871 Helianthus annuus HOM05D004972 ORTHO05D006309 1.3e-91 340.1 225 72.0
Lalb_Chr06g0165661 Lupinus albus HOM05D004972 ORTHO05D006309 3.7e-91 338.6 225 73.8
Sp6g30750 Schrenkiella parvula HOM05D004972 ORTHO05D006309 6.4e-91 337.8 225 72.9
TPR.G4886 Trifolium pratense HOM05D004972 ORTHO05D006309 1.4e-90 336.7 225 72.9
Glyma.10G266000 Glycine max HOM05D004972 ORTHO05D006309 1.9e-90 336.3 225 73.3
Psat6g222200 Pisum sativum HOM05D004972 ORTHO05D006309 3.2e-90 335.5 225 73.3
Glyma.20G124600 Glycine max HOM05D004972 ORTHO05D006309 1.6e-89 333.2 226 73.0
Ca_11105_v3 Cicer arietinum L. HOM05D004972 ORTHO05D006309 2.7e-89 332.4 225 73.3
Ah.02g128040 Amaranthus hybridus HOM05D004972 ORTHO05D006309 2.3e-88 329.3 228 71.9
Medtr1g108610 Medicago truncatula HOM05D004972 ORTHO05D006309 8.6e-88 327.4 232 70.3
PSO063G1195 Papaver somniferum HOM05D004972 ORTHO05D006309 4.3e-87 325.1 227 72.7
PSO782G3547 Papaver somniferum HOM05D004972 ORTHO05D006309 4.3e-87 325.1 227 72.2
Nn6g34668 Nelumbo nucifera HOM05D004972 ORTHO05D006309 7.3e-87 324.3 225 72.9
Aa31LG3G14420 Aethionema arabicum HOM05D004972 ORTHO05D006309 3.6e-86 322.0 225 71.1
Haze_11044 Corylus avellana HOM05D004972 ORTHO05D006309 1.1e-85 320.5 225 73.3
Aqoxy3G04360 Aquilegia oxysepala HOM05D004972 ORTHO05D006309 2.0e-84 316.2 225 69.3
arahy.Tifrunner.gnm1.ann1.DS7XTJ Arachis hypogaea HOM05D004972 ORTHO05D006309 4.9e-83 311.6 225 68.0
arahy.Tifrunner.gnm1.ann1.F2FLG1 Arachis hypogaea HOM05D004972 ORTHO05D006309 1.4e-82 310.1 225 68.0
arahy.Tifrunner.gnm1.ann1.YXX0BK Arachis hypogaea HOM05D004972 ORTHO05D006309 1.4e-82 310.1 225 68.0
ClCG05G022260 Citrullus lanatus HOM05D004972 ORTHO05D006309 2.7e-81 305.8 225 69.3
unitig_0.g2334 Utricularia gibba HOM05D004972 ORTHO05D006309 1.7e-80 303.1 215 69.3
PGR119G0027 Punica granatum HOM05D004972 ORTHO05D006309 1.1e-79 300.4 225 68.4
Os04g0662900 Oryza sativa ssp. japonica HOM05D004972 ORTHO05D006309 2.5e-79 299.3 225 64.0
HPP92_015449 Vanilla planifolia HOM05D004972 ORTHO05D006309 1.6e-78 296.6 227 63.9
MELO3C012297.2 Cucumis melo HOM05D004972 ORTHO05D006309 3.1e-77 292.4 175 80.0
CDE09G0103 Ceratophyllum demersum HOM05D004972 ORTHO05D006309 1.3e-75 287.0 227 63.9
Zm00001eb246210 Zea mays HOM05D004972 ORTHO05D006309 2.4e-74 282.7 210 64.8
Gorai.008G060200 Gossypium raimondii HOM05D004972 ORTHO05D006309 4.1e-74 282.0 225 67.6
Migut.L00658 Erythranthe guttata HOM05D004972 ORTHO05D006309 2.7e-73 279.3 225 67.1
AUR62041239 Chenopodium quinoa HOM05D004972 ORTHO05D006309 3.3e-71 272.3 174 77.0
ATR0315G127 Amborella trichopoda HOM05D004972 ORTHO05D006309 1.8e-69 266.5 226 61.1
BolC2t06543H Brassica oleracea HOM05D004972 ORTHO05D006309 6.8e-69 264.6 229 63.3
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 1.2e-68 263.8 252 59.1
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 1.2e-68 263.8 252 59.1
arahy.Tifrunner.gnm1.ann1.UKIC3J Arachis hypogaea HOM05D004972 ORTHO05D006309 1.7e-64 250.0 245 54.7
Duzib138G1958 Durio zibethinus HOM05D004972 ORTHO05D006309 2.3e-64 249.6 250 59.6
SEGI_23519 Sequoiadendron giganteum HOM05D004972 ORTHO05D006309 1.6e-62 243.4 225 53.8
C02p06000 Brassica napus HOM05D004972 ORTHO05D006309 1.3e-56 223.8 170 67.6
AagrBONN_evm.TU.Sc2ySwM_344.4231 Anthoceros agrestis HOM05D004972 ORTHO05D006309 6.2e-54 214.9 225 50.2
Mapoly0012s0169 Marchantia polymorpha HOM05D004972 ORTHO05D006309 4.0e-53 212.2 225 50.7
Pp3c11_22300 Physcomitrium patens HOM05D004972 ORTHO05D006309 4.0e-53 212.2 225 49.3
FAN17G1863 Fragaria x ananassa HOM05D004972 ORTHO05D006309 3.8e-51 205.7 122 79.5
Cre08.g364250 Chlamydomonas reinhardtii HOM05D004972 ORTHO05D006309 4.8e-46 188.7 225 44.9
MCO09G688 Micromonas commoda HOM05D004972 ORTHO05D006309 2.1e-41 173.3 231 42.9
BcaNung01872 Brassica carinata HOM05D004972 ORTHO05D006309 3.5e-41 172.6 130 66.9
PRCOL_00004209 Prasinoderma coloniale HOM05D004972 ORTHO05D006309 3.5e-41 172.6 228 43.0
CSS0034104 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 3.9e-40 169.1 100 81.0
SHI16322 Sapria himalayana HOM05D004972 ORTHO05D006309 5.1e-40 168.7 207 50.2
CSS0029214 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 1.1e-39 167.5 100 80.0
Pp3c7_4620 Physcomitrium patens HOM05D004972 ORTHO05D006309 3.3e-31 139.4 150 52.0
Hma1.2p1_1593F.1_g292560 Hydrangea macrophylla HOM05D004972 ORTHO05D006309 8.5e-27 124.8 72 80.6
Zm00001eb219440 Zea mays HOM05D009386 ORTHO05D011419 5.3e-21 105.5 65 70.8
CSS0044245 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 4.5e-20 102.4 51 90.2
Hma1.2p1_0813F.1_g222490 Hydrangea macrophylla HOM05D004972 ORTHO05D006309 3.8e-19 99.4 51 90.2
Gorai.001G193400 Gossypium raimondii HOM05D004972 ORTHO05D029864 6.5e-19 98.6 105 52.4
CSS0010746 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 1.1e-18 97.8 51 88.2
Gorai.010G145600 Gossypium raimondii HOM05D004972 ORTHO05D029864 1.4e-18 97.4 79 63.3
CSS0040756 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 4.2e-18 95.9 51 86.3
Gohir.D01G091150 Gossypium hirsutum HOM05D004972 ORTHO05D029864 5.5e-18 95.5 122 46.7
Zm00001eb025950 Zea mays HOM05D004972 ORTHO05D006309 2.1e-17 93.6 78 57.7
CDE02G3434 Ceratophyllum demersum HOM05D004972 ORTHO05D000215 6.7e-16 88.6 76 63.2
Gohir.D11G085800 Gossypium hirsutum HOM05D001136 ORTHO05D011526 1.7e-11 73.9 59 64.4
CSS0013064 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 2.2e-11 73.6 51 74.5
SEGI_16480 Sequoiadendron giganteum HOM05D004972 ORTHO05D006309 1.1e-10 71.2 51 68.6
Gorai.001G223500 Gossypium raimondii HOM05D004972 ORTHO05D029864 1.4e-08 64.3 51 62.7
SHI16326 Sapria himalayana HOM05D004972 ORTHO05D006309 5.7e-07 58.9 56 55.4


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