Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv16001 Davidia involucrata HOM05D000067 ORTHO05D014911 8.7e-53 209.9 98 100.0
Dinv16000 Davidia involucrata HOM05D000067 ORTHO05D000280 2.2e-32 142.1 96 77.1
Dinv15998 Davidia involucrata HOM05D000067 ORTHO05D000280 1.1e-28 129.8 94 74.5
Cfa015891 Carpinus fangiana HOM05D000067 ORTHO05D000280 4.1e-10 68.2 74 51.4
Hma1.2p1_1623F.1_g294170 Hydrangea macrophylla HOM05D000067 ORTHO05D000280 5.4e-10 67.8 51 60.8
CiPaw.08G146400 Carya illinoinensis HOM05D000067 ORTHO05D000280 1.6e-09 66.2 89 41.6
vmacro07919 Vaccinium macrocarpon HOM05D000067 ORTHO05D014911 1.6e-09 66.2 87 46.0
vmacro07921 Vaccinium macrocarpon HOM05D000067 ORTHO05D000280 1.6e-09 66.2 87 46.0
CSS0045875 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000280 2.7e-09 65.5 83 41.0
Haze_00599 Corylus avellana HOM05D000067 ORTHO05D000280 5.9e-09 64.3 75 45.3
Rhsim03G0006800 Rhododendron simsii HOM05D000067 ORTHO05D001311 5.9e-09 64.3 85 47.1
Peaxi162Scf00299g00637 Petunia axillaris HOM05D000067 ORTHO05D000280 1.0e-08 63.5 55 52.7
CiPaw.08G145900 Carya illinoinensis HOM05D000067 ORTHO05D000280 1.7e-08 62.8 80 42.5
Hma1.2p1_1093F.1_g256210 Hydrangea macrophylla HOM05D000067 ORTHO05D000280 1.7e-08 62.8 75 45.3
Rhsim03G0006700 Rhododendron simsii HOM05D000067 ORTHO05D000280 1.7e-08 62.8 89 43.8
CSS0044956 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000280 2.2e-08 62.4 43 60.5
Cfa015880 Carpinus fangiana HOM05D000067 ORTHO05D000280 2.2e-08 62.4 50 58.0
Oeu042985.1 Olea europaea HOM05D000067 ORTHO05D000280 2.2e-08 62.4 57 47.4
DCAR_012963 Daucus carota HOM05D000067 ORTHO05D000280 3.8e-08 61.6 82 45.1
vmacro07915 Vaccinium macrocarpon HOM05D000067 ORTHO05D000280 3.8e-08 61.6 52 53.8
Haze_00600 Corylus avellana HOM05D000067 ORTHO05D000280 5.0e-08 61.2 79 46.8
Duzib147G0494 Durio zibethinus HOM05D000067 ORTHO05D000280 5.0e-08 61.2 54 51.9
Hma1.2p1_2068F.1_g313080 Hydrangea macrophylla HOM05D000067 ORTHO05D000280 5.0e-08 61.2 51 56.9
CSS0027651 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000280 1.1e-07 60.1 54 51.9
Manes.12G149100 Manihot esculenta HOM05D000067 ORTHO05D000280 1.1e-07 60.1 78 41.0
vmacro07917 Vaccinium macrocarpon HOM05D000067 ORTHO05D000280 1.9e-07 59.3 56 51.8
CSS0038720 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D014911 2.5e-07 58.9 70 44.3
Cpa.g.sc19.13 Carica papaya HOM05D000067 ORTHO05D000280 2.5e-07 58.9 36 63.9
Haze_00603 Corylus avellana HOM05D000067 ORTHO05D000280 2.5e-07 58.9 77 46.8
Manes.12G148600 Manihot esculenta HOM05D000067 ORTHO05D000280 3.2e-07 58.5 80 41.2
Cfa015890 Carpinus fangiana HOM05D000067 ORTHO05D000280 4.2e-07 58.2 50 56.0
COL.COLO4_31678 Corchorus olitorius HOM05D000067 ORTHO05D000280 4.2e-07 58.2 37 67.6
HanXRQChr09g0272821 Helianthus annuus HOM05D000067 ORTHO05D000280 4.2e-07 58.2 68 41.2
Manes.12G148666 Manihot esculenta HOM05D000067 ORTHO05D000280 4.2e-07 58.2 78 39.7
Atru.chr10.2065 Acer truncatum HOM05D000067 ORTHO05D000280 5.5e-07 57.8 86 44.2
Cfa015157 Carpinus fangiana HOM05D000067 ORTHO05D000280 5.5e-07 57.8 65 47.7
TAR381G0140 Trochodendron aralioides HOM05D000067 ORTHO05D000280 5.5e-07 57.8 37 64.9
Cfa015882 Carpinus fangiana HOM05D000067 ORTHO05D000280 7.2e-07 57.4 87 42.5
Manes.12G148700 Manihot esculenta HOM05D000067 ORTHO05D000280 7.2e-07 57.4 78 39.7
vmacro07845 Vaccinium macrocarpon HOM05D000067 ORTHO05D000280 7.2e-07 57.4 55 50.9
Atru.chr10.1273 Acer truncatum HOM05D000067 ORTHO05D000280 9.4e-07 57.0 42 57.1
Atru.chr10.2061 Acer truncatum HOM05D000067 ORTHO05D000280 9.4e-07 57.0 86 44.2
ECA233G2440 Erigeron canadensis HOM05D000067 ORTHO05D000280 9.4e-07 57.0 67 41.8
QL09p025393 Quercus lobata HOM05D000067 ORTHO05D000280 9.4e-07 57.0 38 63.2
Nitab4.5_0009590g0020 Nicotiana tabacum HOM05D000067 ORTHO05D000280 1.2e-06 56.6 41 51.2
QL09p026477 Quercus lobata HOM05D000067 ORTHO05D000280 1.2e-06 56.6 38 63.2
QL09p026548 Quercus lobata HOM05D000067 ORTHO05D000280 1.2e-06 56.6 38 63.2
arahy.Tifrunner.gnm1.ann1.ZJER8L Arachis hypogaea HOM05D000067 ORTHO05D000280 1.6e-06 56.2 74 37.8
Oeu042990.1 Olea europaea HOM05D000067 ORTHO05D000280 1.6e-06 56.2 42 54.8
Rhsim05G0138100 Rhododendron simsii HOM05D000067 ORTHO05D000280 1.6e-06 56.2 85 42.4
Duzib187G1103 Durio zibethinus HOM05D000067 ORTHO05D000280 2.1e-06 55.8 51 51.0
ECA233G1866 Erigeron canadensis HOM05D000067 ORTHO05D000280 2.1e-06 55.8 37 59.5
HanXRQChr07g0195911 Helianthus annuus HOM05D000067 ORTHO05D000280 2.1e-06 55.8 46 52.2
Actinidia40426 Actinidia chinensis HOM05D000067 ORTHO05D000280 2.7e-06 55.5 58 46.6
Cfa015883 Carpinus fangiana HOM05D000067 ORTHO05D000280 2.7e-06 55.5 76 44.7
CiPaw.05G183900 Carya illinoinensis HOM05D000067 ORTHO05D000280 2.7e-06 55.5 61 45.9
CiPaw.12G011100 Carya illinoinensis HOM05D000067 ORTHO05D000280 2.7e-06 55.5 81 40.7
CiPaw.15G117400 Carya illinoinensis HOM05D000067 ORTHO05D000280 2.7e-06 55.5 91 38.5
Duzib187G0140 Durio zibethinus HOM05D000067 ORTHO05D000280 2.7e-06 55.5 51 51.0
Duzib187G1054 Durio zibethinus HOM05D000067 ORTHO05D000280 2.7e-06 55.5 51 51.0
Gorai.009G363300 Gossypium raimondii HOM05D000067 ORTHO05D000280 2.7e-06 55.5 48 56.2
Nitab4.5_0002418g0010 Nicotiana tabacum HOM05D000067 ORTHO05D000280 2.7e-06 55.5 91 33.0
MELO3C023275.2 Cucumis melo HOM05D000067 ORTHO05D000280 3.6e-06 55.1 60 45.0
QL09p025429 Quercus lobata HOM05D000067 ORTHO05D000280 3.6e-06 55.1 38 60.5
QL09p026531 Quercus lobata HOM05D000067 ORTHO05D000280 3.6e-06 55.1 38 60.5
Atru.chr4.2540 Acer truncatum HOM05D000067 ORTHO05D000280 4.7e-06 54.7 45 55.6
CiPaw.05G237800 Carya illinoinensis HOM05D000067 ORTHO05D000280 4.7e-06 54.7 39 59.0
ClCG02G000800 Citrullus lanatus HOM05D000067 ORTHO05D000280 4.7e-06 54.7 44 56.8
Haze_00605 Corylus avellana HOM05D000067 ORTHO05D000280 4.7e-06 54.7 37 62.2
CsaV3_2G017980 Cucumis sativus L. HOM05D000067 ORTHO05D000280 4.7e-06 54.7 60 45.0
HanXRQChr09g0271541 Helianthus annuus HOM05D000067 ORTHO05D000280 4.7e-06 54.7 37 59.5
Nitab4.5_0001026g0060 Nicotiana tabacum HOM05D000067 ORTHO05D000280 4.7e-06 54.7 43 46.5
QL09p025712 Quercus lobata HOM05D000067 ORTHO05D000280 4.7e-06 54.7 56 50.0
arahy.Tifrunner.gnm1.ann1.Q8JEHC Arachis hypogaea HOM05D000067 ORTHO05D000280 6.1e-06 54.3 74 37.8
EL10As6g23687 Beta vulgaris HOM05D000067 ORTHO05D000280 6.1e-06 54.3 42 54.8
Cfa015888 Carpinus fangiana HOM05D000067 ORTHO05D000280 6.1e-06 54.3 63 44.4
Duzib160G0380 Durio zibethinus HOM05D000067 ORTHO05D000280 6.1e-06 54.3 41 53.7
Oeu042986.1 Olea europaea HOM05D000067 ORTHO05D000280 6.1e-06 54.3 41 53.7
Oeu042987.1 Olea europaea HOM05D000067 ORTHO05D000280 6.1e-06 54.3 44 47.7
Potri.001G308200 Populus trichocarpa HOM05D000067 ORTHO05D000280 6.1e-06 54.3 84 38.1
Potri.001G308300 Populus trichocarpa HOM05D000067 ORTHO05D000280 6.1e-06 54.3 84 38.1
Potri.019G023006 Populus trichocarpa HOM05D000067 ORTHO05D000280 6.1e-06 54.3 36 66.7
Potri.019G023008 Populus trichocarpa HOM05D000067 ORTHO05D000280 6.1e-06 54.3 36 66.7
Potri.019G023018 Populus trichocarpa HOM05D000067 ORTHO05D000280 6.1e-06 54.3 36 66.7
QL09p025684 Quercus lobata HOM05D000067 ORTHO05D000280 6.1e-06 54.3 67 46.3
QL10p024427 Quercus lobata HOM05D000067 ORTHO05D000280 6.1e-06 54.3 38 63.2
QL10p024505 Quercus lobata HOM05D000067 ORTHO05D000280 6.1e-06 54.3 38 63.2
QL10p024581 Quercus lobata HOM05D000067 ORTHO05D000280 6.1e-06 54.3 38 63.2
CSS0047736 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000280 8.0e-06 53.9 41 53.7
CAN.G523.1 Capsicum annuum HOM05D000067 ORTHO05D000280 8.0e-06 53.9 89 36.0
CiPaw.05G235300 Carya illinoinensis HOM05D000067 ORTHO05D000280 8.0e-06 53.9 40 57.5
Duzib264G0785 Durio zibethinus HOM05D000067 ORTHO05D000280 8.0e-06 53.9 36 66.7
Nitab4.5_0002095g0040 Nicotiana tabacum HOM05D000067 ORTHO05D000280 8.0e-06 53.9 50 50.0
Oeu025081.1 Olea europaea HOM05D000067 ORTHO05D000280 8.0e-06 53.9 41 53.7
Peaxi162Scf00663g00210 Petunia axillaris HOM05D000067 ORTHO05D000280 8.0e-06 53.9 104 34.6
QL08p034368 Quercus lobata HOM05D000067 ORTHO05D000280 8.0e-06 53.9 47 51.1
Sopen01g048310 Solanum pennellii HOM05D000067 ORTHO05D000280 8.0e-06 53.9 73 37.0


User provided reference genes

Program Settings