Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv15942 Davidia involucrata HOM05D007837 ORTHO05D009965 0.0e+00 1077.8 551 100.0
Dinv06743 Davidia involucrata HOM05D007837 ORTHO05D009965 1.5e-247 859.4 551 82.2
CSS0012057 Camellia sinensis var. sinensis HOM05D007837 ORTHO05D009965 8.7e-243 843.6 578 76.1
Actinidia33640 Actinidia chinensis HOM05D007837 ORTHO05D009965 1.6e-228 796.2 580 72.9
Lj1A1155T50 Lonicera japonica HOM05D007837 ORTHO05D009965 3.7e-217 758.4 565 72.0
Manes.16G061400 Manihot esculenta HOM05D007837 ORTHO05D009965 8.6e-198 694.1 578 64.7
Atru.chr10.652 Acer truncatum HOM05D007837 ORTHO05D009965 4.9e-193 678.3 564 65.1
TWI15G0587 Tripterygium wilfordii HOM05D007837 ORTHO05D009965 2.5e-189 666.0 563 61.8
Potri.011G153800 Populus trichocarpa HOM05D007837 ORTHO05D009965 1.2e-188 663.7 564 62.4
Duzib160G0902 Durio zibethinus HOM05D007837 ORTHO05D009965 2.8e-188 662.5 564 62.9
DCAR_001340 Daucus carota HOM05D007837 ORTHO05D009965 2.0e-186 656.4 571 61.8
Thecc.06G015600 Theobroma cacao HOM05D007837 ORTHO05D009965 6.4e-185 651.4 541 64.0
Prupe.4G103700 Prunus persica HOM05D007837 ORTHO05D009965 4.4e-178 628.6 581 59.9
Gorai.009G117500 Gossypium raimondii HOM05D007837 ORTHO05D009965 9.8e-178 627.5 559 59.6
Gohir.A05G113000 Gossypium hirsutum HOM05D007837 ORTHO05D009965 1.4e-176 623.6 561 58.8
Gohir.D05G113500 Gossypium hirsutum HOM05D007837 ORTHO05D009965 1.4e-176 623.6 559 59.2
COL.COLO4_22875 Corchorus olitorius HOM05D007837 ORTHO05D009965 6.6e-174 614.8 575 60.0
PGR042G0413 Punica granatum HOM05D007837 ORTHO05D009965 3.6e-172 609.0 576 57.8
QL05p065337 Quercus lobata HOM05D007837 ORTHO05D009965 6.2e-172 608.2 605 57.9
SalBow8G2294 Salvia bowleyana HOM05D007837 ORTHO05D009965 2.0e-170 603.2 573 56.7
SalBow8G2521 Salvia bowleyana HOM05D007837 ORTHO05D009965 2.0e-170 603.2 573 56.7
TAR626G0822 Trochodendron aralioides HOM05D007837 ORTHO05D009965 1.3e-169 600.5 573 57.8
Ciclev10017939m.g Citrus clementina HOM05D007837 ORTHO05D009965 2.4e-168 596.3 424 72.9
PSO675G4978 Papaver somniferum HOM05D007837 ORTHO05D009965 9.2e-168 594.3 573 56.0
MD05G1261900 Malus domestica HOM05D007837 ORTHO05D009965 2.7e-167 592.8 584 57.0
Migut.M01930 Erythranthe guttata HOM05D007837 ORTHO05D009965 3.5e-167 592.4 570 58.2
PSO541G2349 Papaver somniferum HOM05D007837 ORTHO05D009965 6.0e-167 591.7 573 56.5
Nitab4.5_0001219g0090 Nicotiana tabacum HOM05D007837 ORTHO05D009965 2.3e-166 589.7 633 52.1
FAN21G3089 Fragaria x ananassa HOM05D007837 ORTHO05D009965 3.0e-166 589.3 586 56.1
FvH4_3g11620 Fragaria vesca HOM05D007837 ORTHO05D009965 5.1e-166 588.6 581 55.9
MD10G1240200 Malus domestica HOM05D007837 ORTHO05D009965 2.8e-164 582.8 577 57.2
RcHm_v2.0_Chr5g0018641 Rosa chinensis HOM05D007837 ORTHO05D009965 8.9e-163 577.8 594 55.4
FAN16G2143 Fragaria x ananassa HOM05D007837 ORTHO05D009965 7.6e-162 574.7 590 55.3
FAN25G3065 Fragaria x ananassa HOM05D007837 ORTHO05D009965 7.6e-162 574.7 572 55.9
CANSAT35G1648 Cannabis sativa HOM05D007837 ORTHO05D009965 1.9e-160 570.1 566 55.7
Peaxi162Scf00195g00413 Petunia axillaris HOM05D007837 ORTHO05D009965 6.0e-159 565.1 622 51.6
Nitab4.5_0011721g0030 Nicotiana tabacum HOM05D007837 ORTHO05D009965 3.9e-158 562.4 661 48.6
Aqoxy3G03542 Aquilegia oxysepala HOM05D007837 ORTHO05D009965 1.6e-156 557.0 581 54.9
Cc09_g07320 Coffea canephora HOM05D007837 ORTHO05D009965 6.2e-156 555.1 456 63.8
Sopen02g018680 Solanum pennellii HOM05D007837 ORTHO05D009965 2.1e-151 540.0 712 44.7
Glyma.12G002600 Glycine max HOM05D007837 ORTHO05D009965 1.3e-150 537.3 576 53.1
Sed0012016 Sechium edule HOM05D007837 ORTHO05D009965 1.8e-150 537.0 489 58.9
ClCG01G025810 Citrullus lanatus HOM05D007837 ORTHO05D009965 2.8e-148 529.6 562 54.6
Solyc02g069550.1 Solanum lycopersicum HOM05D007837 ORTHO05D009965 8.1e-148 528.1 713 44.2
Lj3g0012849 Lotus japonicus HOM05D007837 ORTHO05D009965 1.3e-145 520.8 575 51.0
Oeu008970.1 Olea europaea HOM05D007837 ORTHO05D009965 3.5e-143 512.7 422 63.5
MBI18_g28215_MAGBIO Magnolia biondii HOM05D007837 ORTHO05D009965 7.6e-130 468.4 484 55.2
Phvul.011G003300 Phaseolus vulgaris HOM05D007837 ORTHO05D009965 2.1e-127 460.3 496 52.6
ATR1098G128 Amborella trichopoda HOM05D007837 ORTHO05D009965 3.9e-126 456.1 582 46.9
CsaV3_6G053020 Cucumis sativus L. HOM05D007837 ORTHO05D009965 7.4e-125 451.8 412 59.7
Cpa.g.sc192.12 Carica papaya HOM05D007837 ORTHO05D009965 3.1e-123 446.4 408 57.8
MELO3C007007.2 Cucumis melo HOM05D007837 ORTHO05D009965 1.2e-122 444.5 414 58.5
VMungo1127G0844 Vigna mungo HOM05D007837 ORTHO05D009965 1.0e-121 441.4 480 52.1
Lsat_1_v5_gn_1_90680 Lactuca sativa HOM05D007837 ORTHO05D001664 1.1e-107 394.8 421 54.2
arahy.Tifrunner.gnm1.ann1.SA9RL2 Arachis hypogaea HOM05D007837 ORTHO05D009965 2.6e-101 373.6 394 54.1
arahy.Tifrunner.gnm1.ann1.FUT705 Arachis hypogaea HOM05D007837 ORTHO05D009965 1.8e-99 367.5 324 60.2
Potri.001G443025 Populus trichocarpa HOM05D007837 ORTHO05D009965 8.0e-95 352.1 263 68.1
Psat7g145400 Pisum sativum HOM05D007837 ORTHO05D009965 3.5e-90 336.7 292 58.9
Medtr4g035250 Medicago truncatula HOM05D007837 ORTHO05D009965 1.1e-88 331.6 417 47.2
SEGI_16109 Sequoiadendron giganteum HOM05D007837 ORTHO05D009965 2.8e-79 300.4 497 38.6
GSVIVG01037969001 Vitis vinifera HOM05D007837 ORTHO05D009965 4.6e-74 283.1 195 73.3
SMO118G0556 Selaginella moellendorffii HOM05D007837 ORTHO05D009965 4.7e-63 246.5 442 34.8
AagrBONN_evm.TU.Sc2ySwM_228.3840 Anthoceros agrestis HOM05D007837 ORTHO05D009965 1.8e-62 244.6 528 32.2
TAR633G0058 Trochodendron aralioides HOM05D007837 ORTHO05D009965 1.5e-56 224.9 196 57.7
Hma1.2p1_0410F.1_g147000 Hydrangea macrophylla HOM05D007837 ORTHO05D009965 1.2e-47 195.3 216 50.9
TPR.G1949 Trifolium pratense HOM05D007837 ORTHO05D009965 3.4e-45 187.2 184 53.3
Haze_05985 Corylus avellana HOM05D007837 ORTHO05D009965 9.9e-45 185.7 131 71.8
TPR.G10794 Trifolium pratense HOM05D007837 ORTHO05D009965 1.4e-43 181.8 188 52.7
Hma1.2p1_0410F.1_g147010 Hydrangea macrophylla HOM05D007837 ORTHO05D009965 1.1e-40 172.2 105 81.0
GSVIVG01037970001 Vitis vinifera HOM05D007837 ORTHO05D009965 2.9e-36 157.5 99 78.8
Sabra11G0145700 Salix brachista HOM05D007837 ORTHO05D009965 4.9e-36 156.8 115 64.3
Glyma.03G069100 Glycine max HOM05D007837 ORTHO05D009965 3.0e-33 147.5 157 56.7
Medtr4g035220 Medicago truncatula HOM05D007837 ORTHO05D009965 7.4e-32 142.9 120 60.8
Oeu008971.1 Olea europaea HOM05D007837 ORTHO05D009965 6.4e-28 129.8 100 65.0
TAR086G0001 Trochodendron aralioides HOM05D007837 ORTHO05D009965 3.7e-23 114.0 62 85.5
Sabra11G0145800 Salix brachista HOM05D007837 ORTHO05D009965 4.8e-23 113.6 154 46.1
Pp3c26_6480 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.6e-18 98.6 237 30.8
Pp3c26_6484 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.6e-18 98.6 237 30.8
TAR365G1222 Trochodendron aralioides HOM05D001154 ORTHO05D010892 6.0e-18 96.7 64 68.8
Pp3c10_12340 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.0e-17 95.9 285 28.8
TAR626G1098 Trochodendron aralioides HOM05D001154 ORTHO05D010892 1.0e-17 95.9 64 68.8
Pp3c11_2120 Physcomitrium patens HOM05D007670 ORTHO05D009646 3.3e-16 90.9 230 31.7
TAR362G0005 Trochodendron aralioides HOM05D007837 ORTHO05D009965 9.7e-16 89.4 72 56.9
Cpa.g.sc192.14 Carica papaya HOM05D007837 ORTHO05D009965 4.5e-13 80.5 58 65.5
Pp3c7_23860 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.3e-12 79.0 256 26.6
Mapoly0020s0028 Marchantia polymorpha HOM05D007670 ORTHO05D009646 4.2e-11 73.9 192 30.2
Pp3c18_13530 Physcomitrium patens HOM05D007670 ORTHO05D009646 4.2e-11 73.9 274 24.8
SEGI_28887 Sequoiadendron giganteum HOM05D007670 ORTHO05D009646 7.2e-11 73.2 229 27.5
SMO263G0007 Selaginella moellendorffii HOM05D007837 ORTHO05D009965 2.7e-10 71.2 228 25.9
Atru.chr9.2593 Acer truncatum HOM05D007670 ORTHO05D009646 7.9e-10 69.7 241 24.9
Aqoxy3G01244 Aquilegia oxysepala HOM05D007670 ORTHO05D009646 1.4e-09 68.9 239 25.5
Ciclev10024352m.g Citrus clementina HOM05D007670 ORTHO05D009646 2.3e-09 68.2 240 25.4
COL.COLO4_33501 Corchorus olitorius HOM05D007670 ORTHO05D009646 2.3e-09 68.2 231 24.7
PSO478G3950 Papaver somniferum HOM05D007670 ORTHO05D009646 2.3e-09 68.2 222 27.0
Zm00001eb388830 Zea mays HOM05D007670 ORTHO05D009646 2.3e-09 68.2 228 27.2
Cfa019228 Carpinus fangiana HOM05D007670 ORTHO05D009646 3.0e-09 67.8 217 24.9
ClCG03G003050 Citrullus lanatus HOM05D007670 ORTHO05D009646 3.9e-09 67.4 228 26.8
TAR371G0483 Trochodendron aralioides HOM05D001154 ORTHO05D010892 3.9e-09 67.4 39 74.4
HPP92_003438 Vanilla planifolia HOM05D001493 ORTHO05D001681 3.9e-09 67.4 297 25.9
HPP92_001311 Vanilla planifolia HOM05D007670 ORTHO05D009646 5.1e-09 67.0 295 24.4
Eucgr.K02784 Eucalyptus grandis HOM05D007670 ORTHO05D009646 6.7e-09 66.6 239 24.3
PRCOL_00005542 Prasinoderma coloniale HOM05D007837 ORTHO05D009965 8.8e-09 66.2 196 29.1
ATR0824G010 Amborella trichopoda HOM05D007670 ORTHO05D009646 1.1e-08 65.9 229 27.9
CiPaw.12G031800 Carya illinoinensis HOM05D007670 ORTHO05D009646 1.1e-08 65.9 195 27.2
MELO3C002304.2 Cucumis melo HOM05D007670 ORTHO05D009646 1.5e-08 65.5 192 29.7
Sopen03g031210 Solanum pennellii HOM05D007670 ORTHO05D009646 3.3e-08 64.3 212 25.5
TWI23G1319 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 4.3e-08 63.9 192 27.1
Prupe.5G164600 Prunus persica HOM05D007670 ORTHO05D009646 7.4e-08 63.2 221 25.8
Nitab4.5_0008913g0020 Nicotiana tabacum HOM05D007670 ORTHO05D009646 1.3e-07 62.4 214 25.2
PGR044G2723 Punica granatum HOM05D007670 ORTHO05D009646 1.3e-07 62.4 204 26.0
arahy.Tifrunner.gnm1.ann1.4HF9FM Arachis hypogaea HOM05D007670 ORTHO05D009646 1.7e-07 62.0 192 24.5
Manes.06G111300 Manihot esculenta HOM05D007670 ORTHO05D009646 1.7e-07 62.0 212 23.6
Glyma.05G042100 Glycine max HOM05D007670 ORTHO05D009646 2.2e-07 61.6 198 25.8
Sed0003800 Sechium edule HOM05D007670 ORTHO05D009646 2.2e-07 61.6 229 27.1
TWI39G0169 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 2.2e-07 61.6 164 27.4
VMungo1215G0346 Vigna mungo HOM05D007670 ORTHO05D009646 2.8e-07 61.2 215 23.3
Actinidia08035 Actinidia chinensis HOM05D007670 ORTHO05D009646 3.7e-07 60.8 246 23.6
Pp3c21_7410 Physcomitrium patens HOM05D007670 ORTHO05D009646 3.7e-07 60.8 370 21.4
Cc04_g11380 Coffea canephora HOM05D007670 ORTHO05D009646 6.3e-07 60.1 246 24.0
Potri.015G084300 Populus trichocarpa HOM05D007670 ORTHO05D009646 6.3e-07 60.1 207 25.6
arahy.Tifrunner.gnm1.ann1.2S9CTF Arachis hypogaea HOM05D007670 ORTHO05D009646 8.2e-07 59.7 192 24.0
Migut.O00167 Erythranthe guttata HOM05D007670 ORTHO05D009646 8.2e-07 59.7 177 27.7
FAN13G0035 Fragaria x ananassa HOM05D007670 ORTHO05D009646 8.2e-07 59.7 242 24.4
Phvul.003G205800 Phaseolus vulgaris HOM05D007670 ORTHO05D009646 8.2e-07 59.7 215 23.3
Ca_19420_v3 Cicer arietinum L. HOM05D007670 ORTHO05D009646 1.1e-06 59.3 197 23.9
FAN08G1903 Fragaria x ananassa HOM05D007670 ORTHO05D009646 1.1e-06 59.3 219 24.7
CANSAT80G0945 Cannabis sativa HOM05D007670 ORTHO05D009646 1.4e-06 58.9 190 24.2
Medtr4g104750 Medicago truncatula HOM05D007670 ORTHO05D009646 1.4e-06 58.9 193 24.4
SEGI_26529 Sequoiadendron giganteum HOM05D007837 ORTHO05D009965 1.4e-06 58.9 78 39.7
TAR629G1516 Trochodendron aralioides HOM05D007670 ORTHO05D009646 1.4e-06 58.9 216 24.5
Gohir.A03G074800 Gossypium hirsutum HOM05D007670 ORTHO05D009646 1.8e-06 58.5 203 25.6
MD14G1170500 Malus domestica HOM05D007670 ORTHO05D009646 3.1e-06 57.8 169 24.9
Lj5C130G15 Lonicera japonica HOM05D007670 ORTHO05D009646 4.1e-06 57.4 198 24.7
TPR.G37476 Trifolium pratense HOM05D007670 ORTHO05D009646 5.3e-06 57.0 193 24.4
ECA246G3610 Erigeron canadensis HOM05D007670 ORTHO05D009646 6.9e-06 56.6 231 23.4
FvH4_5g06391 Fragaria vesca HOM05D007670 ORTHO05D009646 6.9e-06 56.6 208 25.5
Lsat_1_v5_gn_5_13921 Lactuca sativa HOM05D007670 ORTHO05D009646 6.9e-06 56.6 205 23.9
Thecc.03G116000 Theobroma cacao HOM05D007670 ORTHO05D009646 6.9e-06 56.6 199 25.6
FAN18G1020 Fragaria x ananassa HOM05D007670 ORTHO05D009646 9.1e-06 56.2 208 25.5
PGSC0003DMG400018192 Solanum tuberosum HOM05D007670 ORTHO05D009646 9.1e-06 56.2 211 25.1


User provided reference genes

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