Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv15900 Davidia involucrata HOM05D007320 ORTHO05D009290 7.4e-56 220.7 147 100.0
Dinv15897 Davidia involucrata HOM05D007320 ORTHO05D009290 2.3e-41 172.6 183 73.2
Atru.chr6.2840 Acer truncatum HOM05D007320 ORTHO05D009290 7.2e-35 151.0 183 50.8
TPR.G5736 Trifolium pratense HOM05D007320 ORTHO05D009290 1.0e-33 147.1 154 51.3
Cfa014690 Carpinus fangiana HOM05D007320 ORTHO05D009290 1.4e-33 146.7 183 61.7
Haze_13306 Corylus avellana HOM05D007320 ORTHO05D009290 2.3e-33 146.0 180 61.1
Hma1.2p1_0002F.1_g002500 Hydrangea macrophylla HOM05D007320 ORTHO05D009290 2.3e-33 146.0 183 62.8
CSS0012636 Camellia sinensis var. sinensis HOM05D007320 ORTHO05D009290 2.6e-32 142.5 183 64.5
Lj3g0010689 Lotus japonicus HOM05D007320 ORTHO05D009290 5.7e-32 141.4 183 61.2
Glyma.12G208100 Glycine max HOM05D007320 ORTHO05D009290 7.5e-32 141.0 183 45.9
Ca_01474_v3 Cicer arietinum L. HOM05D007320 ORTHO05D009290 9.7e-32 140.6 183 54.1
CiPaw.04G130300 Carya illinoinensis HOM05D007320 ORTHO05D009290 3.7e-31 138.7 183 44.8
Ciclev10017507m.g Citrus clementina HOM05D007320 ORTHO05D009290 8.2e-31 137.5 183 45.9
Lalb_Chr25g0279081 Lupinus albus HOM05D007320 ORTHO05D009290 1.1e-30 137.1 183 58.5
TWI59G0750 Tripterygium wilfordii HOM05D007320 ORTHO05D009290 5.3e-30 134.8 183 44.8
CANSAT64G2476 Cannabis sativa HOM05D007320 ORTHO05D009290 7.0e-30 134.4 183 59.0
Medtr2g090885 Medicago truncatula HOM05D007320 ORTHO05D009290 9.1e-30 134.0 183 59.6
FAN10G1335 Fragaria x ananassa HOM05D007320 ORTHO05D009290 1.2e-29 133.7 183 60.1
FAN10G4046 Fragaria x ananassa HOM05D007320 ORTHO05D009290 1.2e-29 133.7 183 60.1
Actinidia11122 Actinidia chinensis HOM05D007320 ORTHO05D009290 1.6e-29 133.3 183 45.9
GSVIVG01020656001 Vitis vinifera HOM05D007320 ORTHO05D009290 1.6e-29 133.3 183 59.0
Sopen01g035350 Solanum pennellii HOM05D007320 ORTHO05D009290 4.5e-29 131.7 183 44.3
Dinv19981 Davidia involucrata HOM05D007320 ORTHO05D009290 5.9e-29 131.3 164 69.5
VMungo1080G0443 Vigna mungo HOM05D007320 ORTHO05D009290 7.7e-29 131.0 183 42.6
FvH4_7g08410 Fragaria vesca HOM05D007320 ORTHO05D009290 1.0e-28 130.6 183 57.9
Solyc01g088490.3 Solanum lycopersicum HOM05D007320 ORTHO05D009290 1.0e-28 130.6 183 44.3
FAN03G0990 Fragaria x ananassa HOM05D007320 ORTHO05D009290 2.2e-28 129.4 181 58.0
Phvul.005G098950 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 2.9e-28 129.0 183 41.0
PGSC0003DMG400001712 Solanum tuberosum HOM05D007320 ORTHO05D009290 2.9e-28 129.0 183 43.7
vmacro12358 Vaccinium macrocarpon HOM05D007320 ORTHO05D009290 2.9e-28 129.0 183 56.8
Prupe.3G125800 Prunus persica HOM05D007320 ORTHO05D009290 1.5e-27 126.7 183 59.6
CAN.G756.7 Capsicum annuum HOM05D007320 ORTHO05D009290 1.9e-27 126.3 183 41.5
Rhsim06G0135200 Rhododendron simsii HOM05D007320 ORTHO05D009290 1.9e-27 126.3 183 57.4
Sabra13G0103100 Salix brachista HOM05D007320 ORTHO05D009290 1.9e-27 126.3 183 56.8
Cpa.g.sc209.6 Carica papaya HOM05D007320 ORTHO05D009290 2.5e-27 125.9 183 43.2
Manes.13G139600 Manihot esculenta HOM05D007320 ORTHO05D009290 3.2e-27 125.6 183 50.3
MD09G1241100 Malus domestica HOM05D007320 ORTHO05D009290 4.2e-27 125.2 183 59.0
Potri.013G124100 Populus trichocarpa HOM05D007320 ORTHO05D009290 1.6e-26 123.2 183 56.8
Nn3g20750 Nelumbo nucifera HOM05D007320 ORTHO05D009290 2.7e-26 122.5 183 42.6
RcHm_v2.0_Chr0c20g0500221 Rosa chinensis HOM05D007320 ORTHO05D009290 8.0e-26 120.9 183 54.1
Psat5g275040 Pisum sativum HOM05D007320 ORTHO05D009290 1.4e-25 120.2 183 54.1
Lj1P690T28 Lonicera japonica HOM05D007320 ORTHO05D009290 2.3e-25 119.4 183 59.0
Sed0016711 Sechium edule HOM05D007320 ORTHO05D009290 2.3e-25 119.4 183 54.1
HanXRQChr17g0565321 Helianthus annuus HOM05D007320 ORTHO05D009290 4.0e-25 118.6 183 42.1
Peaxi162Scf00745g00038 Petunia axillaris HOM05D007320 ORTHO05D009290 6.8e-25 117.9 180 40.0
Gohir.D05G254900 Gossypium hirsutum HOM05D007320 ORTHO05D009290 8.8e-25 117.5 183 43.2
Gorai.009G266400 Gossypium raimondii HOM05D007320 ORTHO05D009290 8.8e-25 117.5 183 43.2
Cc05_g07980 Coffea canephora HOM05D007320 ORTHO05D009290 1.2e-24 117.1 183 41.0
ClCG02G009070 Citrullus lanatus HOM05D007320 ORTHO05D009290 1.5e-24 116.7 181 39.8
Gohir.A05G253000 Gossypium hirsutum HOM05D007320 ORTHO05D009290 1.5e-24 116.7 183 43.2
TAR627G0001 Trochodendron aralioides HOM05D007320 ORTHO05D009290 3.4e-24 115.5 183 58.5
Hund07849 Selenicereus undatus HOM05D007320 ORTHO05D009290 9.8e-24 114.0 183 38.3
Thecc.08G174300 Theobroma cacao HOM05D007320 ORTHO05D009290 9.8e-24 114.0 183 59.0
TPR.G6440 Trifolium pratense HOM05D007320 ORTHO05D009290 1.3e-23 113.6 183 55.2
BcaB02g06809 Brassica carinata HOM05D007320 ORTHO05D009290 4.8e-23 111.7 183 56.3
CsaV3_2G004500 Cucumis sativus L. HOM05D007320 ORTHO05D009290 6.3e-23 111.3 183 38.8
BcaC05g24288 Brassica carinata HOM05D007320 ORTHO05D009290 1.1e-22 110.5 183 55.2
BolC5t29229H Brassica oleracea HOM05D007320 ORTHO05D009290 1.1e-22 110.5 183 55.2
DCAR_013053 Daucus carota HOM05D007320 ORTHO05D009290 1.1e-22 110.5 183 56.8
AUR62024073 Chenopodium quinoa HOM05D007320 ORTHO05D009290 1.4e-22 110.2 183 52.5
ECA234G2345 Erigeron canadensis HOM05D007320 ORTHO05D009290 1.4e-22 110.2 183 39.9
Thhalv10008110m.g Eutrema salsugineum HOM05D007320 ORTHO05D009290 1.4e-22 110.2 183 55.2
Nitab4.5_0001895g0020 Nicotiana tabacum HOM05D007320 ORTHO05D009290 1.4e-22 110.2 170 39.4
MSTRG.20317 Avicennia marina HOM05D007320 ORTHO05D009290 1.8e-22 109.8 183 38.8
Sc07g0005270 Simmondsia chinensis HOM05D007320 ORTHO05D009290 1.8e-22 109.8 183 54.1
THA.LOC104800856 Tarenaya hassleriana HOM05D007320 ORTHO05D009290 1.8e-22 109.8 183 54.1
AL1G16280 Arabidopsis lyrata HOM05D007320 ORTHO05D009290 2.4e-22 109.4 183 55.2
C05p04580 Brassica napus HOM05D007320 ORTHO05D009290 2.4e-22 109.4 183 55.2
AT1G06270 Arabidopsis thaliana HOM05D007320 ORTHO05D009290 3.1e-22 109.0 183 55.2
CARHR005830 Cardamine hirsuta HOM05D007320 ORTHO05D009290 3.1e-22 109.0 183 55.2
Oeu000571.1 Olea europaea HOM05D007320 ORTHO05D009290 3.1e-22 109.0 183 52.5
Sp1g05080 Schrenkiella parvula HOM05D007320 ORTHO05D009290 3.1e-22 109.0 183 55.2
Migut.L01118 Erythranthe guttata HOM05D007320 ORTHO05D009290 9.1e-22 107.5 183 40.4
SalBow8G4737 Salvia bowleyana HOM05D007320 ORTHO05D009290 1.2e-21 107.1 183 37.2
Aa31LG1G7290 Aethionema arabicum HOM05D007320 ORTHO05D009290 1.6e-21 106.7 183 51.9
SalBow8G5340 Salvia bowleyana HOM05D007320 ORTHO05D009290 2.0e-21 106.3 183 36.6
AUR62035379 Chenopodium quinoa HOM05D007320 ORTHO05D009290 3.5e-21 105.5 183 51.9
A10p04990 Brassica napus HOM05D007320 ORTHO05D009290 7.7e-21 104.4 183 53.6
BraA10t42760Z Brassica rapa HOM05D007320 ORTHO05D009290 7.7e-21 104.4 183 53.6
Carub.0001s0564 Capsella rubella HOM05D007320 ORTHO05D009290 7.7e-21 104.4 183 54.1
MBI06_g25716_MAGBIO Magnolia biondii HOM05D007320 ORTHO05D009290 7.7e-21 104.4 183 37.2
COL.COLO4_26851 Corchorus olitorius HOM05D007320 ORTHO05D009290 1.3e-20 103.6 183 49.2
SGA_v2.0_scaffold313G48283 Striga asiatica HOM05D007320 ORTHO05D009290 2.3e-20 102.8 184 39.1
Migut.C00284 Erythranthe guttata HOM05D007320 ORTHO05D009290 1.1e-19 100.5 183 39.3
Eucgr.F01954 Eucalyptus grandis HOM05D007320 ORTHO05D009290 1.1e-19 100.5 183 51.4
SHI10502 Sapria himalayana HOM05D007320 ORTHO05D009290 1.1e-19 100.5 184 49.5
arahy.Tifrunner.gnm1.ann1.CSM94Q Arachis hypogaea HOM05D007320 ORTHO05D009290 4.2e-19 98.6 161 38.5
Migut.D01592 Erythranthe guttata HOM05D007320 ORTHO05D009290 2.1e-18 96.3 183 37.7
EL10Ac2g02568 Beta vulgaris HOM05D007320 ORTHO05D009290 1.8e-17 93.2 183 48.6
Nitab4.5_0008210g0010 Nicotiana tabacum HOM05D007320 ORTHO05D009290 2.3e-17 92.8 164 35.4
unitig_62.g23164 Utricularia gibba HOM05D007320 ORTHO05D009290 4.0e-17 92.0 184 37.0
arahy.Tifrunner.gnm1.ann1.66V1NK Arachis hypogaea HOM05D007320 ORTHO05D009290 1.3e-15 87.0 162 35.8
PGSC0003DMG401001710 Solanum tuberosum HOM05D007320 ORTHO05D009290 1.1e-14 84.0 113 46.0
MELO3C021360.2 Cucumis melo HOM05D007320 ORTHO05D009290 1.4e-14 83.6 75 56.0
Lsat_1_v5_gn_4_28301 Lactuca sativa HOM05D007320 ORTHO05D009290 5.4e-14 81.6 149 34.9
PGR083G2305 Punica granatum HOM05D007320 ORTHO05D009290 7.3e-11 71.2 182 41.8
TPR.G34643 Trifolium pratense HOM05D007320 ORTHO05D009290 3.6e-10 68.9 38 81.6
Sc21g0003340 Simmondsia chinensis HOM05D007320 ORTHO05D009290 1.2e-08 63.9 47 61.7
MELO3C004341.2 Cucumis melo HOM05D007320 ORTHO05D009290 1.3e-07 60.5 100 35.0
Sc21g0003330 Simmondsia chinensis HOM05D007320 ORTHO05D009290 8.3e-07 57.8 32 78.1
SalBow7G0970 Salvia bowleyana HOM05D000555 ORTHO05D000646 3.2e-06 55.8 104 34.6


User provided reference genes

Program Settings