Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv15897 Davidia involucrata HOM05D007320 ORTHO05D009290 7.3e-191 670.6 399 100.0
Dinv19981 Davidia involucrata HOM05D007320 ORTHO05D009290 6.3e-142 508.1 307 97.4
GSVIVG01020656001 Vitis vinifera HOM05D007320 ORTHO05D009290 1.4e-120 437.2 344 74.4
Hma1.2p1_0002F.1_g002500 Hydrangea macrophylla HOM05D007320 ORTHO05D009290 1.5e-119 433.7 348 76.1
Atru.chr6.2840 Acer truncatum HOM05D007320 ORTHO05D009290 3.2e-117 426.0 344 64.8
Prupe.3G125800 Prunus persica HOM05D007320 ORTHO05D009290 3.2e-117 426.0 344 74.1
Actinidia11122 Actinidia chinensis HOM05D007320 ORTHO05D009290 9.2e-117 424.5 324 67.6
Ciclev10017507m.g Citrus clementina HOM05D007320 ORTHO05D009290 5.9e-116 421.8 344 63.1
vmacro12358 Vaccinium macrocarpon HOM05D007320 ORTHO05D009290 4.3e-114 415.6 344 72.4
CiPaw.04G130300 Carya illinoinensis HOM05D007320 ORTHO05D009290 9.5e-114 414.5 346 63.3
Cfa014690 Carpinus fangiana HOM05D007320 ORTHO05D009290 1.6e-113 413.7 344 70.1
Lj1P690T28 Lonicera japonica HOM05D007320 ORTHO05D009290 4.7e-113 412.1 344 73.3
Rhsim06G0135200 Rhododendron simsii HOM05D007320 ORTHO05D009290 6.2e-113 411.8 344 72.4
CSS0012636 Camellia sinensis var. sinensis HOM05D007320 ORTHO05D009290 1.0e-112 411.0 339 74.9
TWI59G0750 Tripterygium wilfordii HOM05D007320 ORTHO05D009290 4.0e-112 409.1 349 62.8
Haze_13306 Corylus avellana HOM05D007320 ORTHO05D009290 8.9e-112 407.9 341 70.4
MD09G1241100 Malus domestica HOM05D007320 ORTHO05D009290 2.7e-108 396.4 339 71.1
FAN10G1335 Fragaria x ananassa HOM05D007320 ORTHO05D009290 2.3e-107 393.3 344 66.6
TAR627G0001 Trochodendron aralioides HOM05D007320 ORTHO05D009290 2.3e-107 393.3 350 72.6
FvH4_7g08410 Fragaria vesca HOM05D007320 ORTHO05D009290 5.0e-107 392.1 344 66.3
FAN10G4046 Fragaria x ananassa HOM05D007320 ORTHO05D009290 2.5e-106 389.8 344 66.3
Manes.13G139600 Manihot esculenta HOM05D007320 ORTHO05D009290 7.3e-106 388.3 345 64.6
FAN03G0990 Fragaria x ananassa HOM05D007320 ORTHO05D009290 2.8e-105 386.3 342 65.8
CANSAT64G2476 Cannabis sativa HOM05D007320 ORTHO05D009290 8.1e-105 384.8 346 67.1
Lalb_Chr25g0279081 Lupinus albus HOM05D007320 ORTHO05D009290 3.1e-104 382.9 334 67.4
RcHm_v2.0_Chr0c20g0500221 Rosa chinensis HOM05D007320 ORTHO05D009290 3.4e-103 379.4 344 63.4
Ca_01474_v3 Cicer arietinum L. HOM05D007320 ORTHO05D009290 9.8e-103 377.9 334 64.1
CAN.G756.7 Capsicum annuum HOM05D007320 ORTHO05D009290 1.3e-102 377.5 329 60.2
Oeu000571.1 Olea europaea HOM05D007320 ORTHO05D009290 1.3e-102 377.5 344 64.2
Lj3g0010689 Lotus japonicus HOM05D007320 ORTHO05D009290 1.7e-102 377.1 324 68.5
Medtr2g090885 Medicago truncatula HOM05D007320 ORTHO05D009290 1.7e-102 377.1 325 68.6
Sopen01g035350 Solanum pennellii HOM05D007320 ORTHO05D009290 2.2e-102 376.7 317 60.9
Glyma.12G208100 Glycine max HOM05D007320 ORTHO05D009290 4.9e-102 375.6 318 60.7
PGSC0003DMG400001712 Solanum tuberosum HOM05D007320 ORTHO05D009290 1.4e-101 374.0 317 60.3
Solyc01g088490.3 Solanum lycopersicum HOM05D007320 ORTHO05D009290 7.1e-101 371.7 317 60.3
Nitab4.5_0001895g0020 Nicotiana tabacum HOM05D007320 ORTHO05D009290 1.6e-100 370.5 298 62.8
VMungo1080G0443 Vigna mungo HOM05D007320 ORTHO05D009290 2.1e-100 370.2 334 60.2
Cc05_g07980 Coffea canephora HOM05D007320 ORTHO05D009290 1.7e-99 367.1 344 57.3
Nn3g20750 Nelumbo nucifera HOM05D007320 ORTHO05D009290 1.7e-99 367.1 350 58.9
Phvul.005G098950 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 8.6e-99 364.8 318 59.7
Sabra13G0103100 Salix brachista HOM05D007320 ORTHO05D009290 1.5e-98 364.0 345 65.8
TPR.G6440 Trifolium pratense HOM05D007320 ORTHO05D009290 7.3e-98 361.7 357 64.4
Hund07849 Selenicereus undatus HOM05D007320 ORTHO05D009290 1.2e-97 360.9 323 55.7
Nitab4.5_0008210g0010 Nicotiana tabacum HOM05D007320 ORTHO05D009290 2.1e-97 360.1 323 59.1
Potri.013G124100 Populus trichocarpa HOM05D007320 ORTHO05D009290 4.7e-97 359.0 345 65.5
Psat5g275040 Pisum sativum HOM05D007320 ORTHO05D009290 1.1e-96 357.8 342 64.9
DCAR_013053 Daucus carota HOM05D007320 ORTHO05D009290 1.4e-96 357.5 332 66.3
Thecc.08G174300 Theobroma cacao HOM05D007320 ORTHO05D009290 4.0e-96 355.9 320 69.4
MSTRG.20317 Avicennia marina HOM05D007320 ORTHO05D009290 6.8e-96 355.1 353 53.5
Gohir.A05G253000 Gossypium hirsutum HOM05D007320 ORTHO05D009290 1.5e-95 354.0 344 56.1
Gohir.D05G254900 Gossypium hirsutum HOM05D007320 ORTHO05D009290 1.5e-95 354.0 344 56.1
Gorai.009G266400 Gossypium raimondii HOM05D007320 ORTHO05D009290 1.5e-95 354.0 344 55.8
Cpa.g.sc209.6 Carica papaya HOM05D007320 ORTHO05D009290 4.4e-95 352.4 330 57.9
ClCG02G009070 Citrullus lanatus HOM05D007320 ORTHO05D009290 7.6e-95 351.7 327 54.7
Sed0016711 Sechium edule HOM05D007320 ORTHO05D009290 3.7e-94 349.4 329 62.9
CsaV3_2G004500 Cucumis sativus L. HOM05D007320 ORTHO05D009290 6.4e-94 348.6 329 54.4
HanXRQChr17g0565321 Helianthus annuus HOM05D007320 ORTHO05D009290 8.4e-94 348.2 346 54.0
EL10Ac2g02568 Beta vulgaris HOM05D007320 ORTHO05D009290 1.1e-93 347.8 364 59.6
COL.COLO4_26851 Corchorus olitorius HOM05D007320 ORTHO05D009290 2.7e-92 343.2 320 63.1
AUR62035379 Chenopodium quinoa HOM05D007320 ORTHO05D009290 3.5e-92 342.8 315 65.1
Eucgr.F01954 Eucalyptus grandis HOM05D007320 ORTHO05D009290 8.6e-91 338.2 344 61.9
THA.LOC104800856 Tarenaya hassleriana HOM05D007320 ORTHO05D009290 1.1e-90 337.8 320 65.9
ECA234G2345 Erigeron canadensis HOM05D007320 ORTHO05D009290 1.5e-90 337.4 321 55.8
Migut.L01118 Erythranthe guttata HOM05D007320 ORTHO05D009290 5.6e-90 335.5 345 55.1
SalBow8G4737 Salvia bowleyana HOM05D007320 ORTHO05D009290 1.2e-89 334.3 320 55.3
Sc07g0005270 Simmondsia chinensis HOM05D007320 ORTHO05D009290 2.8e-89 333.2 331 64.7
AT1G06270 Arabidopsis thaliana HOM05D007320 ORTHO05D009290 3.6e-89 332.8 318 64.8
Sp1g05080 Schrenkiella parvula HOM05D007320 ORTHO05D009290 4.7e-89 332.4 318 65.1
Thhalv10008110m.g Eutrema salsugineum HOM05D007320 ORTHO05D009290 6.2e-89 332.0 318 64.5
CARHR005830 Cardamine hirsuta HOM05D007320 ORTHO05D009290 2.4e-88 330.1 318 64.2
AL1G16280 Arabidopsis lyrata HOM05D007320 ORTHO05D009290 6.8e-88 328.6 318 64.5
BcaB02g06809 Brassica carinata HOM05D007320 ORTHO05D009290 6.8e-88 328.6 317 64.7
SalBow8G5340 Salvia bowleyana HOM05D007320 ORTHO05D009290 8.9e-88 328.2 320 54.1
Aa31LG1G7290 Aethionema arabicum HOM05D007320 ORTHO05D009290 1.2e-87 327.8 317 61.8
Carub.0001s0564 Capsella rubella HOM05D007320 ORTHO05D009290 1.2e-87 327.8 317 64.4
Migut.C00284 Erythranthe guttata HOM05D007320 ORTHO05D009290 1.5e-87 327.4 345 55.1
SGA_v2.0_scaffold313G48283 Striga asiatica HOM05D007320 ORTHO05D009290 9.9e-87 324.7 356 51.4
BolC5t29229H Brassica oleracea HOM05D007320 ORTHO05D009290 8.4e-86 321.6 318 63.5
C05p04580 Brassica napus HOM05D007320 ORTHO05D009290 1.4e-85 320.9 318 63.5
Migut.D01592 Erythranthe guttata HOM05D007320 ORTHO05D009290 1.4e-85 320.9 345 54.2
BcaC05g24288 Brassica carinata HOM05D007320 ORTHO05D009290 2.4e-85 320.1 318 63.2
A10p04990 Brassica napus HOM05D007320 ORTHO05D009290 4.6e-84 315.8 318 62.6
BraA10t42760Z Brassica rapa HOM05D007320 ORTHO05D009290 4.6e-84 315.8 318 62.6
MBI06_g25716_MAGBIO Magnolia biondii HOM05D007320 ORTHO05D009290 7.8e-84 315.1 333 55.3
Lsat_1_v5_gn_4_28301 Lactuca sativa HOM05D007320 ORTHO05D009290 1.9e-82 310.5 319 53.0
Peaxi162Scf00745g00038 Petunia axillaris HOM05D007320 ORTHO05D009290 2.4e-80 303.5 348 49.1
unitig_62.g23164 Utricularia gibba HOM05D007320 ORTHO05D009290 2.9e-78 296.6 351 47.3
PGR083G2305 Punica granatum HOM05D007320 ORTHO05D009290 3.4e-71 273.1 333 58.0
SHI10502 Sapria himalayana HOM05D007320 ORTHO05D009290 3.4e-71 273.1 317 56.5
TPR.G5736 Trifolium pratense HOM05D007320 ORTHO05D009290 1.4e-69 267.7 270 52.6
AUR62024073 Chenopodium quinoa HOM05D007320 ORTHO05D009290 7.9e-68 261.9 231 70.1
TPR.G34643 Trifolium pratense HOM05D007320 ORTHO05D009290 1.3e-57 228.0 188 62.8
MELO3C004341.2 Cucumis melo HOM05D007320 ORTHO05D009290 1.3e-51 208.0 228 48.2
Phvul.005G098533 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 3.7e-49 199.9 159 62.9
arahy.Tifrunner.gnm1.ann1.CSM94Q Arachis hypogaea HOM05D007320 ORTHO05D009290 3.7e-41 173.3 161 56.5
Dinv15900 Davidia involucrata HOM05D007320 ORTHO05D009290 6.3e-41 172.6 183 73.2
arahy.Tifrunner.gnm1.ann1.66V1NK Arachis hypogaea HOM05D007320 ORTHO05D009290 4.2e-37 159.8 162 53.7
Cpa.g.sc209.4 Carica papaya HOM05D007320 ORTHO05D009290 4.2e-37 159.8 161 54.0
PGSC0003DMG401001710 Solanum tuberosum HOM05D007320 ORTHO05D009290 5.1e-35 152.9 113 66.4
Sc21g0003340 Simmondsia chinensis HOM05D007320 ORTHO05D009290 2.8e-33 147.1 99 69.7
Sc21g0003330 Simmondsia chinensis HOM05D007320 ORTHO05D009290 1.0e-27 128.6 180 43.9
SalBow7G0970 Salvia bowleyana HOM05D000555 ORTHO05D000646 5.0e-22 109.8 104 55.8
arahy.Tifrunner.gnm1.ann1.5PR57S Arachis hypogaea HOM05D007320 ORTHO05D009290 3.6e-20 103.6 137 46.7
Peaxi162Scf00102g01049 Petunia axillaris HOM05D007320 ORTHO05D009290 1.0e-14 85.5 77 55.8
MELO3C021360.2 Cucumis melo HOM05D007320 ORTHO05D009290 2.7e-12 77.4 111 41.4


User provided reference genes

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