Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv15896 Davidia involucrata HOM05D000953 ORTHO05D000231 8.0e-64 246.9 122 100.0
CSS0033968 Camellia sinensis var. sinensis HOM05D000953 ORTHO05D000231 7.6e-38 160.6 163 58.3
Hma1.2p1_1028F.1_g249550 Hydrangea macrophylla HOM05D000953 ORTHO05D000231 3.7e-37 158.3 167 55.1
Solyc07g007360.3 Solanum lycopersicum HOM05D000953 ORTHO05D000231 3.9e-34 148.3 168 51.8
Sopen07g003430 Solanum pennellii HOM05D000953 ORTHO05D000231 3.9e-34 148.3 168 51.8
PGSC0003DMG400030690 Solanum tuberosum HOM05D000953 ORTHO05D000231 5.6e-33 144.4 168 49.4
Nitab4.5_0002845g0080 Nicotiana tabacum HOM05D000953 ORTHO05D000231 9.6e-33 143.7 167 49.7
Nitab4.5_0002286g0040 Nicotiana tabacum HOM05D000953 ORTHO05D000231 2.8e-32 142.1 167 49.1
vmacro06113 Vaccinium macrocarpon HOM05D000953 ORTHO05D000231 4.7e-32 141.4 166 53.6
Rhsim03G0253500 Rhododendron simsii HOM05D000953 ORTHO05D000231 1.4e-31 139.8 169 52.7
Cc06_g07620 Coffea canephora HOM05D000953 ORTHO05D000231 3.1e-31 138.7 167 47.9
Peaxi162Scf00088g00052 Petunia axillaris HOM05D000953 ORTHO05D000231 2.0e-30 136.0 167 46.7
Haze_25442 Corylus avellana HOM05D000953 ORTHO05D000231 2.6e-30 135.6 168 50.0
Lj9P704T28 Lonicera japonica HOM05D000953 ORTHO05D000231 2.2e-29 132.5 163 48.5
FvH4_1g01971 Fragaria vesca HOM05D000953 ORTHO05D000231 6.4e-29 131.0 168 46.4
FAN19G2374 Fragaria x ananassa HOM05D000953 ORTHO05D000231 8.4e-29 130.6 168 46.4
FAN28G0241 Fragaria x ananassa HOM05D000953 ORTHO05D000231 2.4e-28 129.0 168 46.4
FAN26G3127 Fragaria x ananassa HOM05D000953 ORTHO05D000231 3.2e-28 128.6 126 55.6
CAN.G1281.8 Capsicum annuum HOM05D000953 ORTHO05D000231 4.2e-28 128.3 168 44.6
Prupe.7G257400 Prunus persica HOM05D000953 ORTHO05D000231 1.2e-27 126.7 168 45.8
Nn8g39652 Nelumbo nucifera HOM05D000953 ORTHO05D000231 1.6e-27 126.3 168 47.0
Oeu058586.1 Olea europaea HOM05D000953 ORTHO05D000231 7.8e-27 124.0 167 44.3
CANSAT11G2208 Cannabis sativa HOM05D000953 ORTHO05D000231 1.3e-26 123.2 172 44.8
HanXRQChr10g0314141 Helianthus annuus HOM05D000953 ORTHO05D000231 1.3e-26 123.2 167 45.5
FAN23G3006 Fragaria x ananassa HOM05D000953 ORTHO05D000231 2.3e-26 122.5 167 44.9
TWI74G0791 Tripterygium wilfordii HOM05D000953 ORTHO05D000231 2.3e-26 122.5 170 45.3
QL02p090822 Quercus lobata HOM05D000953 ORTHO05D000231 3.0e-26 122.1 170 47.1
Lalb_Chr07g0179381 Lupinus albus HOM05D000953 ORTHO05D000231 6.6e-26 120.9 168 45.8
Aqoxy7G03590 Aquilegia oxysepala HOM05D000953 ORTHO05D000231 8.7e-26 120.6 168 45.2
MSTRG.6082 Avicennia marina HOM05D000953 ORTHO05D000231 8.7e-26 120.6 168 44.0
CsaV3_2G003390 Cucumis sativus L. HOM05D000953 ORTHO05D000231 8.7e-26 120.6 166 45.2
ClCG11G003520 Citrullus lanatus HOM05D000953 ORTHO05D000231 1.1e-25 120.2 168 44.6
MBI14_g46490_MAGBIO Magnolia biondii HOM05D000953 ORTHO05D000231 1.1e-25 120.2 166 45.8
Lj4g0004665 Lotus japonicus HOM05D000953 ORTHO05D000231 2.5e-25 119.0 168 44.6
Ca_21635_v3 Cicer arietinum L. HOM05D000953 ORTHO05D000231 1.6e-24 116.3 163 45.4
TPR.G28510 Trifolium pratense HOM05D000953 ORTHO05D000231 6.2e-24 114.4 168 42.9
ECA234G2313 Erigeron canadensis HOM05D000953 ORTHO05D000231 8.1e-24 114.0 163 43.6
VMungo1215G1254 Vigna mungo HOM05D000953 ORTHO05D000231 2.4e-23 112.5 168 43.5
Sc23g0002990 Simmondsia chinensis HOM05D000953 ORTHO05D000231 3.1e-23 112.1 168 41.1
Cpa.g.sc29.100 Carica papaya HOM05D000953 ORTHO05D000231 5.3e-23 111.3 169 43.8
Sed0027420 Sechium edule HOM05D000953 ORTHO05D000231 1.2e-22 110.2 165 42.4
Psat4g034320 Pisum sativum HOM05D000953 ORTHO05D000231 1.5e-22 109.8 178 41.0
COL.COLO4_24125 Corchorus olitorius HOM05D000953 ORTHO05D000231 5.8e-22 107.8 164 43.3
PSO781G0153 Papaver somniferum HOM05D000953 ORTHO05D000231 9.9e-22 107.1 171 40.9
PGR102G1625 Punica granatum HOM05D000953 ORTHO05D000231 1.3e-21 106.7 169 41.4
PSO541G2995 Papaver somniferum HOM05D000953 ORTHO05D000231 2.2e-21 105.9 171 40.4
Sabra18G0100900 Salix brachista HOM05D000953 ORTHO05D000231 2.2e-21 105.9 172 41.9
Sabra18G0099400 Salix brachista HOM05D000953 ORTHO05D000231 2.9e-21 105.5 172 41.9
Sabra18G0099600 Salix brachista HOM05D000953 ORTHO05D000231 2.9e-21 105.5 172 41.9
Sabra18G0101400 Salix brachista HOM05D000953 ORTHO05D000231 2.9e-21 105.5 172 41.9
Duzib168G1412 Durio zibethinus HOM05D000953 ORTHO05D000231 1.9e-20 102.8 164 42.7
THA.LOC104815291 Tarenaya hassleriana HOM05D000953 ORTHO05D000231 5.4e-20 101.3 164 43.3
EL10Ac8g18789 Beta vulgaris HOM05D000953 ORTHO05D000231 4.6e-19 98.2 170 38.2
BcaC01g03129 Brassica carinata HOM05D000953 ORTHO05D000231 1.3e-18 96.7 159 42.8
C03p55770 Brassica napus HOM05D000953 ORTHO05D000231 1.3e-18 96.7 159 42.8
BolC3t17858H Brassica oleracea HOM05D000953 ORTHO05D000231 1.3e-18 96.7 159 42.8
BraA03t13625Z Brassica rapa HOM05D000953 ORTHO05D000231 3.9e-18 95.1 159 41.5
A03p44890 Brassica napus HOM05D000953 ORTHO05D000231 1.1e-17 93.6 160 41.2
Ah.14g079020 Amaranthus hybridus HOM05D000953 ORTHO05D000231 2.5e-17 92.4 170 34.1
AUR62020004 Chenopodium quinoa HOM05D000953 ORTHO05D000231 3.3e-17 92.0 157 37.6
BcaB08g34525 Brassica carinata HOM05D000953 ORTHO05D000231 7.3e-17 90.9 158 38.0
Sp3g26660 Schrenkiella parvula HOM05D000953 ORTHO05D000231 6.2e-16 87.8 168 38.7
AUR62011229 Chenopodium quinoa HOM05D000953 ORTHO05D000231 8.1e-16 87.4 157 36.3
CDE01G0695 Ceratophyllum demersum HOM05D000953 ORTHO05D000231 1.2e-14 83.6 156 36.5
CARHR065130 Cardamine hirsuta HOM05D000953 ORTHO05D000231 7.6e-14 80.9 172 36.6
arahy.Tifrunner.gnm1.ann1.IYK4NF Arachis hypogaea HOM05D000953 ORTHO05D000231 9.9e-14 80.5 111 46.8
Dinv41442 Davidia involucrata HOM05D000953 ORTHO05D000231 1.3e-13 80.1 45 88.9
RcHm_v2.0_Chr2g0087021 Rosa chinensis HOM05D000953 ORTHO05D000231 3.8e-13 78.6 62 66.1
Actinidia38705 Actinidia chinensis HOM05D000953 ORTHO05D000231 4.9e-13 78.2 62 64.5
AL2G31930 Arabidopsis lyrata HOM05D000953 ORTHO05D000231 4.2e-12 75.1 155 36.8
AT1G72275 Arabidopsis thaliana HOM05D000953 ORTHO05D000231 1.6e-11 73.2 155 36.8
VMungo1080G1014 Vigna mungo HOM05D000953 ORTHO05D000231 1.1e-09 67.0 62 54.8
HPP92_018495 Vanilla planifolia HOM05D000953 ORTHO05D000231 1.5e-09 66.6 124 41.1
Os04g0644200 Oryza sativa ssp. japonica HOM05D000953 ORTHO05D000231 4.3e-09 65.1 154 34.4
HPP92_018493 Vanilla planifolia HOM05D000953 ORTHO05D000231 2.8e-08 62.4 148 36.5


User provided reference genes

Program Settings