Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv15885 Davidia involucrata HOM05D000894 ORTHO05D002325 1.3e-82 309.7 160 100.0
Dinv18181 Davidia involucrata HOM05D000894 ORTHO05D002325 3.5e-51 205.3 154 75.3
CSS0044780 Camellia sinensis var. sinensis HOM05D000894 ORTHO05D002325 7.6e-38 161.0 150 62.0
CSS0023523 Camellia sinensis var. sinensis HOM05D000894 ORTHO05D002325 2.4e-31 139.4 143 58.0
TAR625G0898 Trochodendron aralioides HOM05D000894 ORTHO05D002325 9.9e-30 134.0 145 54.5
Rhsim02G0205100 Rhododendron simsii HOM05D000894 ORTHO05D002325 2.7e-27 125.9 163 50.3
TAR636G0605 Trochodendron aralioides HOM05D000894 ORTHO05D002325 1.8e-26 123.2 145 51.7
Actinidia13217 Actinidia chinensis HOM05D000894 ORTHO05D002325 7.4e-25 117.9 154 50.6
Nn2g12221 Nelumbo nucifera HOM05D000894 ORTHO05D002325 1.8e-23 113.2 143 48.3
vmacro11206 Vaccinium macrocarpon HOM05D000894 ORTHO05D002325 1.2e-22 110.5 149 51.7
TPR.G15790 Trifolium pratense HOM05D000894 ORTHO05D002325 8.7e-18 94.4 145 43.4
TWI34G1460 Tripterygium wilfordii HOM05D000894 ORTHO05D002325 1.1e-17 94.0 145 46.9
Solyc06g036720.4 Solanum lycopersicum HOM05D000894 ORTHO05D002325 1.6e-16 90.1 159 41.5
Sopen06g012780 Solanum pennellii HOM05D000894 ORTHO05D002325 1.6e-16 90.1 159 41.5
PGSC0003DMG402016046 Solanum tuberosum HOM05D000894 ORTHO05D002325 2.8e-16 89.4 159 39.6
Glyma.17G106000 Glycine max HOM05D000894 ORTHO05D002325 3.7e-16 89.0 145 42.1
Prupe.7G256000 Prunus persica HOM05D000894 ORTHO05D002325 4.8e-16 88.6 145 41.4
QL02p091098 Quercus lobata HOM05D000894 ORTHO05D002325 8.2e-16 87.8 145 40.0
arahy.Tifrunner.gnm1.ann1.K7E7DP Arachis hypogaea HOM05D000894 ORTHO05D002325 1.1e-15 87.4 145 39.3
arahy.Tifrunner.gnm1.ann1.WU89NH Arachis hypogaea HOM05D000894 ORTHO05D002325 1.8e-15 86.7 145 38.6
Phvul.003G173700 Phaseolus vulgaris HOM05D000894 ORTHO05D002325 4.0e-15 85.5 145 41.4
Ca_21622_v3 Cicer arietinum L. HOM05D000894 ORTHO05D002325 6.9e-15 84.7 142 39.4
MBI14_g03624_MAGBIO Magnolia biondii HOM05D000894 ORTHO05D002325 6.9e-15 84.7 146 43.8
VMungo1215G1990 Vigna mungo HOM05D000894 ORTHO05D002325 9.0e-15 84.3 145 40.7
DCAR_006203 Daucus carota HOM05D000894 ORTHO05D002325 1.2e-14 84.0 108 50.0
RcHm_v2.0_Chr2g0086801 Rosa chinensis HOM05D000894 ORTHO05D002325 1.2e-14 84.0 142 38.7
ECA248G3445 Erigeron canadensis HOM05D000894 ORTHO05D002325 1.5e-14 83.6 148 42.6
Hma1.2p1_0182F.1_g080380 Hydrangea macrophylla HOM05D000894 ORTHO05D002325 2.0e-14 83.2 145 37.2
HanXRQChr01g0030611 Helianthus annuus HOM05D000894 ORTHO05D002325 2.6e-14 82.8 143 43.4
Haze_19330 Corylus avellana HOM05D000894 ORTHO05D002325 3.4e-14 82.4 147 39.5
CAN.G24.5 Capsicum annuum HOM05D000894 ORTHO05D002325 7.6e-14 81.3 159 38.4
FAN23G1845 Fragaria x ananassa HOM05D000894 ORTHO05D002325 7.6e-14 81.3 146 39.0
CANSAT11G0306 Cannabis sativa HOM05D000894 ORTHO05D002325 4.9e-13 78.6 148 37.2
Peaxi162Scf00116g01011 Petunia axillaris HOM05D000894 ORTHO05D002325 6.5e-13 78.2 149 34.2
FAN19G1184 Fragaria x ananassa HOM05D000894 ORTHO05D002325 8.4e-13 77.8 145 36.6
FAN26G2867 Fragaria x ananassa HOM05D000894 ORTHO05D002325 8.4e-13 77.8 145 36.6
FAN28G0708 Fragaria x ananassa HOM05D000894 ORTHO05D001833 8.4e-13 77.8 145 36.6
Atru.chr7.270 Acer truncatum HOM05D000894 ORTHO05D002325 2.5e-12 76.3 147 39.5
Lalb_Chr13g0301261 Lupinus albus HOM05D000894 ORTHO05D002325 3.2e-12 75.9 145 39.3
Potri.006G059700 Populus trichocarpa HOM05D000894 ORTHO05D002325 3.2e-12 75.9 146 41.8
TWI63G0674 Tripterygium wilfordii HOM05D000894 ORTHO05D002325 3.2e-12 75.9 145 40.0
FvH4_1g01820 Fragaria vesca HOM05D000894 ORTHO05D002325 9.3e-12 74.3 146 35.6
Sabra18G0098100 Salix brachista HOM05D000894 ORTHO05D001833 9.3e-12 74.3 145 42.8
AUR62011244 Chenopodium quinoa HOM05D000894 ORTHO05D002325 1.6e-11 73.6 144 37.5
Medtr4g116370 Medicago truncatula HOM05D000894 ORTHO05D002325 1.6e-11 73.6 145 35.9
Psat4g035360 Pisum sativum HOM05D000894 ORTHO05D002325 1.6e-11 73.6 145 39.3
Sabra06G0043100 Salix brachista HOM05D000894 ORTHO05D002325 1.6e-11 73.6 145 42.1
Cpa.g.sc46.79 Carica papaya HOM05D000894 ORTHO05D002325 2.1e-11 73.2 149 36.9
MD02G1016100 Malus domestica HOM05D000894 ORTHO05D002325 2.7e-11 72.8 145 37.9
Potri.018G115500 Populus trichocarpa HOM05D000894 ORTHO05D002325 2.7e-11 72.8 145 43.4
Lalb_Chr07g0179451 Lupinus albus HOM05D000894 ORTHO05D002325 3.5e-11 72.4 140 37.1
Duzib168G0818 Durio zibethinus HOM05D000894 ORTHO05D002325 6.1e-11 71.6 142 37.3
CiPaw.15G183300 Carya illinoinensis HOM05D000894 ORTHO05D002325 1.3e-10 70.5 145 36.6
Lj4g0017820 Lotus japonicus HOM05D000894 ORTHO05D002325 1.3e-10 70.5 145 38.6
GSVIVG01012875001 Vitis vinifera HOM05D000894 ORTHO05D002325 1.3e-10 70.5 146 39.7
Ciclev10007581m.g Citrus clementina HOM05D000894 ORTHO05D002325 3.0e-10 69.3 148 37.2
Lj9A706T36 Lonicera japonica HOM05D000894 ORTHO05D002325 5.1e-10 68.6 148 38.5
COL.COLO4_24118 Corchorus olitorius HOM05D000894 ORTHO05D002325 6.7e-10 68.2 146 38.4
Nitab4.5_0002992g0030 Nicotiana tabacum HOM05D000894 ORTHO05D002325 6.7e-10 68.2 149 33.6
MSTRG.1732 Avicennia marina HOM05D000894 ORTHO05D002325 1.1e-09 67.4 149 35.6
MELO3C004438.2 Cucumis melo HOM05D000894 ORTHO05D002325 1.1e-09 67.4 142 34.5
HanXRQChr11g0353751 Helianthus annuus HOM05D000894 ORTHO05D002325 1.5e-09 67.0 157 35.0
CsaV3_2G003580 Cucumis sativus L. HOM05D000894 ORTHO05D002325 1.9e-09 66.6 143 34.3
Duzib150G0541 Durio zibethinus HOM05D000894 ORTHO05D002325 2.5e-09 66.2 142 34.5
Eucgr.C04105 Eucalyptus grandis HOM05D000894 ORTHO05D002325 3.3e-09 65.9 144 36.1
Sed0018498 Sechium edule HOM05D000894 ORTHO05D002325 3.3e-09 65.9 148 31.8
Oeu036215.1 Olea europaea HOM05D000894 ORTHO05D002325 5.7e-09 65.1 157 38.9
ClCG02G017210 Citrullus lanatus HOM05D000894 ORTHO05D002325 7.4e-09 64.7 143 33.6
MD15G1160800 Malus domestica HOM05D000894 ORTHO05D002325 9.7e-09 64.3 148 37.2
AUR62041459 Chenopodium quinoa HOM05D000894 ORTHO05D002325 2.2e-08 63.2 146 35.6
Thecc.09G140100 Theobroma cacao HOM05D000894 ORTHO05D002325 2.8e-08 62.8 145 35.2
Sc08g0005760 Simmondsia chinensis HOM05D000894 ORTHO05D002325 4.8e-08 62.0 144 34.0
Lsat_1_v5_gn_1_43760 Lactuca sativa HOM05D000894 ORTHO05D002325 6.3e-08 61.6 138 40.6
Nitab4.5_0005958g0040 Nicotiana tabacum HOM05D000894 ORTHO05D002325 6.3e-08 61.6 149 32.9
Manes.14G137400 Manihot esculenta HOM05D000894 ORTHO05D002325 8.2e-08 61.2 146 38.4
Ah.14g078850 Amaranthus hybridus HOM05D000894 ORTHO05D002325 3.1e-07 59.3 145 35.9
Hund21602 Selenicereus undatus HOM05D000894 ORTHO05D002325 5.3e-07 58.5 147 34.7
Cpa.g.sc187.17 Carica papaya HOM05D000894 ORTHO05D002325 1.5e-06 57.0 113 38.9
EL10Ac8g18806 Beta vulgaris HOM05D000894 ORTHO05D002325 2.0e-06 56.6 122 34.4
Gohir.A06G051100 Gossypium hirsutum HOM05D000894 ORTHO05D002325 7.7e-06 54.7 142 34.5
Gohir.D06G050200 Gossypium hirsutum HOM05D000894 ORTHO05D002325 7.7e-06 54.7 146 36.3
Gohir.A13G202900 Gossypium hirsutum HOM05D000894 ORTHO05D002325 1.0e-05 54.3 143 32.9
Gohir.D13G208200 Gossypium hirsutum HOM05D000894 ORTHO05D002325 1.0e-05 54.3 143 32.9
Gorai.010G057100 Gossypium raimondii HOM05D000894 ORTHO05D002325 1.0e-05 54.3 143 36.4


User provided reference genes

Program Settings