Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv15807 Davidia involucrata HOM05D002857 ORTHO05D008347 3.3e-89 331.6 165 100.0
CiPaw.06G165500 Carya illinoinensis HOM05D002857 ORTHO05D008347 2.0e-78 295.8 165 86.1
QL07p014115 Quercus lobata HOM05D002857 ORTHO05D008347 2.7e-78 295.4 163 85.9
Manes.10G081600 Manihot esculenta HOM05D002857 ORTHO05D008347 1.3e-77 293.1 165 84.8
GSVIVG01037837001 Vitis vinifera HOM05D002857 ORTHO05D008347 2.2e-77 292.4 165 86.7
Cfa009507 Carpinus fangiana HOM05D002857 ORTHO05D008347 2.9e-77 292.0 165 84.8
Potri.009G088200 Populus trichocarpa HOM05D002857 ORTHO05D008347 2.9e-77 292.0 165 86.1
TAR381G0590 Trochodendron aralioides HOM05D002857 ORTHO05D008347 2.9e-77 292.0 165 86.1
Cfa004654 Carpinus fangiana HOM05D002857 ORTHO05D008347 8.5e-77 290.4 165 84.2
Haze_10256 Corylus avellana HOM05D002857 ORTHO05D008347 1.1e-76 290.0 165 83.6
CSS0041876 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D008347 2.5e-76 288.9 161 86.3
Sabra09G0068300 Salix brachista HOM05D002857 ORTHO05D008347 4.2e-76 288.1 165 84.8
CiPaw.05G017800 Carya illinoinensis HOM05D002857 ORTHO05D008347 5.5e-76 287.7 165 84.2
Nn5g30580 Nelumbo nucifera HOM05D002857 ORTHO05D008347 5.5e-76 287.7 165 85.5
Duzib132G1128 Durio zibethinus HOM05D002857 ORTHO05D008347 1.6e-75 286.2 165 83.6
Ciclev10029201m.g Citrus clementina HOM05D002857 ORTHO05D008347 2.1e-75 285.8 165 82.4
Actinidia34361 Actinidia chinensis HOM05D002857 ORTHO05D008347 2.7e-75 285.4 165 82.4
Atru.chr5.2351 Acer truncatum HOM05D002857 ORTHO05D008347 4.7e-75 284.6 165 82.4
vmacro19465 Vaccinium macrocarpon HOM05D002857 ORTHO05D008347 4.7e-75 284.6 161 81.4
vmacro23229 Vaccinium macrocarpon HOM05D002857 ORTHO05D008347 4.7e-75 284.6 161 81.4
COL.COLO4_32514 Corchorus olitorius HOM05D002857 ORTHO05D007919 6.1e-75 284.3 165 83.0
Prupe.8G144800 Prunus persica HOM05D002857 ORTHO05D008347 6.1e-75 284.3 161 84.5
Lj5A219T41 Lonicera japonica HOM05D002857 ORTHO05D008347 1.4e-74 283.1 162 82.1
Gohir.D12G019900 Gossypium hirsutum HOM05D002857 ORTHO05D008347 5.2e-74 281.2 165 81.2
Gorai.008G020300 Gossypium raimondii HOM05D002857 ORTHO05D008347 8.8e-74 280.4 165 80.6
MD05G1100100 Malus domestica HOM05D002857 ORTHO05D008347 1.5e-73 279.6 161 81.4
Peaxi162Scf00016g02839 Petunia axillaris HOM05D002857 ORTHO05D008347 1.5e-73 279.6 165 78.8
PGR120G0011 Punica granatum HOM05D002857 ORTHO05D008347 1.5e-73 279.6 165 80.6
Cfa010108 Carpinus fangiana HOM05D002857 ORTHO05D008347 2.0e-73 279.3 167 82.0
Nitab4.5_0008075g0040 Nicotiana tabacum HOM05D002857 ORTHO05D008347 2.0e-73 279.3 165 80.0
PGR142G0748 Punica granatum HOM05D002857 ORTHO05D008347 2.0e-73 279.3 165 80.6
Gohir.A12G019700 Gossypium hirsutum HOM05D002857 ORTHO05D008347 3.4e-73 278.5 161 82.0
TWI14G1023 Tripterygium wilfordii HOM05D002857 ORTHO05D008347 7.5e-73 277.3 159 83.6
Solyc01g107020.4 Solanum lycopersicum HOM05D002857 ORTHO05D008347 9.8e-73 276.9 165 77.6
Thecc.02G117000 Theobroma cacao HOM05D002857 ORTHO05D008347 1.3e-72 276.6 158 83.5
FvH4_2g04342 Fragaria vesca HOM05D002857 ORTHO05D008347 1.7e-72 276.2 163 81.0
MD05G1100400 Malus domestica HOM05D002857 ORTHO05D008347 2.2e-72 275.8 161 80.1
CAN.G606.59 Capsicum annuum HOM05D002857 ORTHO05D008347 2.8e-72 275.4 165 77.0
RcHm_v2.0_Chr6g0253801 Rosa chinensis HOM05D002857 ORTHO05D008347 2.8e-72 275.4 165 79.4
Nitab4.5_0001105g0010 Nicotiana tabacum HOM05D002857 ORTHO05D008347 3.7e-72 275.0 161 80.1
Cpa.g.sc106.48 Carica papaya HOM05D002857 ORTHO05D008347 6.3e-72 274.2 161 82.0
Cc02_g19860 Coffea canephora HOM05D002857 ORTHO05D008347 6.3e-72 274.2 163 77.9
Sopen01g049290 Solanum pennellii HOM05D002857 ORTHO05D008347 6.3e-72 274.2 165 77.0
Eucgr.I01062 Eucalyptus grandis HOM05D002857 ORTHO05D008347 1.1e-71 273.5 165 78.8
Potri.001G293700 Populus trichocarpa HOM05D002857 ORTHO05D008347 1.1e-71 273.5 165 79.4
Glyma.17G078200 Glycine max HOM05D002857 ORTHO05D008347 1.8e-71 272.7 161 78.3
Lsat_1_v5_gn_1_103341 Lactuca sativa HOM05D002857 ORTHO05D008347 2.4e-71 272.3 161 80.1
Oeu010450.1 Olea europaea HOM05D002857 ORTHO05D008347 2.4e-71 272.3 161 80.7
ClCG10G010270 Citrullus lanatus HOM05D002857 ORTHO05D008347 3.1e-71 271.9 161 80.1
Aqoxy6G02637 Aquilegia oxysepala HOM05D002857 ORTHO05D008347 9.2e-71 270.4 161 80.1
MSTRG.27764 Avicennia marina HOM05D002857 ORTHO05D008347 9.2e-71 270.4 161 77.6
CANSAT35G0667 Cannabis sativa HOM05D002857 ORTHO05D008347 9.2e-71 270.4 162 77.8
Lalb_Chr06g0165111 Lupinus albus HOM05D002857 ORTHO05D008347 2.0e-70 269.2 164 77.4
Psat0s3618g0120 Pisum sativum HOM05D002857 ORTHO05D008347 2.0e-70 269.2 165 77.6
Medtr4g109520 Medicago truncatula HOM05D002857 ORTHO05D008347 2.7e-70 268.9 165 76.4
PSO541G0380 Papaver somniferum HOM05D002857 ORTHO05D008347 2.7e-70 268.9 165 77.0
CsaV3_4G000220 Cucumis sativus L. HOM05D002857 ORTHO05D008347 3.5e-70 268.5 162 77.8
Lj4g0011899 Lotus japonicus HOM05D002857 ORTHO05D008347 3.5e-70 268.5 161 76.4
MELO3C018011.2 Cucumis melo HOM05D002857 ORTHO05D008347 4.5e-70 268.1 164 76.8
TPR.G2009 Trifolium pratense HOM05D002857 ORTHO05D008347 4.5e-70 268.1 165 77.0
PSO675G0546 Papaver somniferum HOM05D002857 ORTHO05D008347 2.3e-69 265.8 165 76.4
HanXRQChr01g0025491 Helianthus annuus HOM05D002857 ORTHO05D008347 5.0e-69 264.6 161 77.6
Phvul.003G185000 Phaseolus vulgaris HOM05D002857 ORTHO05D008347 6.6e-69 264.2 161 76.4
Sed0016408 Sechium edule HOM05D002857 ORTHO05D008347 1.5e-68 263.1 164 75.6
DCAR_001699 Daucus carota HOM05D002857 ORTHO05D008347 3.3e-68 261.9 165 72.7
Ca_21777_v3 Cicer arietinum L. HOM05D002857 ORTHO05D008347 4.3e-68 261.5 162 75.9
PGSC0003DMG400025744 Solanum tuberosum HOM05D002857 ORTHO05D008347 4.3e-68 261.5 158 77.2
Rhsim11G0151500 Rhododendron simsii HOM05D002133 ORTHO05D008347 5.6e-68 261.2 156 79.5
Rhsim11G0152900 Rhododendron simsii HOM05D002133 ORTHO05D008347 5.6e-68 261.2 156 79.5
EL10Ac9g22202 Beta vulgaris HOM05D002857 ORTHO05D008347 9.5e-68 260.4 163 74.2
Hund00691 Selenicereus undatus HOM05D002857 ORTHO05D008347 9.5e-68 260.4 162 73.5
AUR62027003 Chenopodium quinoa HOM05D002857 ORTHO05D008347 1.6e-67 259.6 163 73.6
SGA_v2.0_scaffold219G42527 Striga asiatica HOM05D002857 ORTHO05D008347 1.6e-67 259.6 163 73.0
Nn3g19581 Nelumbo nucifera HOM05D002857 ORTHO05D008347 2.1e-67 259.2 165 78.2
Migut.O00567 Erythranthe guttata HOM05D002857 ORTHO05D008347 1.4e-66 256.5 161 73.9
Migut.N01136 Erythranthe guttata HOM05D002857 ORTHO05D008347 4.0e-66 255.0 161 73.9
unitig_749.g13509 Utricularia gibba HOM05D002857 ORTHO05D008347 1.2e-65 253.4 159 75.5
VMungo1215G1881 Vigna mungo HOM05D002857 ORTHO05D008347 5.7e-65 251.1 154 77.3
CDE04G2041 Ceratophyllum demersum HOM05D002857 ORTHO05D008347 4.1e-63 245.0 161 71.4
SalBow3G3786 Salvia bowleyana HOM05D002857 ORTHO05D008347 5.4e-63 244.6 162 70.4
FAN24G3287 Fragaria x ananassa HOM05D001904 ORTHO05D008347 1.7e-61 239.6 139 82.0
BcaB07g33450 Brassica carinata HOM05D002857 ORTHO05D007919 7.3e-60 234.2 161 67.1
Ah.01g006980 Amaranthus hybridus HOM05D002857 ORTHO05D008347 1.6e-59 233.0 140 75.7
AL1G57550 Arabidopsis lyrata HOM05D002857 ORTHO05D008347 2.8e-59 232.3 157 68.2
BcaC08g43176 Brassica carinata HOM05D002857 ORTHO05D007919 3.6e-59 231.9 161 66.5
A06p03450 Brassica napus HOM05D002857 ORTHO05D008347 3.6e-59 231.9 161 66.5
C06p04760 Brassica napus HOM05D002857 ORTHO05D008347 3.6e-59 231.9 161 66.5
BolC6t35606H Brassica oleracea HOM05D002857 ORTHO05D008347 3.6e-59 231.9 161 66.5
BraA06t23553Z Brassica rapa HOM05D002857 ORTHO05D008347 3.6e-59 231.9 161 66.5
Thhalv10011799m.g Eutrema salsugineum HOM05D002857 ORTHO05D008347 3.6e-59 231.9 161 65.8
Aa31LG10G4120 Aethionema arabicum HOM05D002857 ORTHO05D008347 1.0e-58 230.3 161 65.8
Carub.0001s3918 Capsella rubella HOM05D002857 ORTHO05D008347 1.0e-58 230.3 161 65.2
HPP92_003268 Vanilla planifolia HOM05D002857 ORTHO05D008347 1.8e-58 229.6 163 66.9
SpUn0137_0020 Schrenkiella parvula HOM05D002857 ORTHO05D008347 6.8e-58 227.6 161 65.8
Os10g0350800 Oryza sativa ssp. japonica HOM05D002857 ORTHO05D008347 4.9e-56 221.5 175 62.3
THA.LOC104803442 Tarenaya hassleriana HOM05D002857 ORTHO05D008347 8.3e-56 220.7 163 65.6
Zm00001eb019030 Zea mays HOM05D002857 ORTHO05D008347 1.0e-53 213.8 164 63.4
Ciclev10007042m.g Citrus clementina HOM05D002857 ORTHO05D008347 2.3e-53 212.6 145 70.3
ECA234G2213 Erigeron canadensis HOM05D002857 ORTHO05D008347 1.5e-49 199.9 122 73.0
SMO361G0227 Selaginella moellendorffii HOM05D002857 ORTHO05D008347 1.1e-47 193.7 161 55.3
AagrBONN_evm.TU.Sc2ySwM_228.4585 Anthoceros agrestis HOM05D002857 ORTHO05D008347 3.3e-44 182.2 161 53.4
Pp3c5_10320 Physcomitrium patens HOM05D002857 ORTHO05D008347 1.4e-42 176.8 164 53.7
Oeu010448.1 Olea europaea HOM05D002857 ORTHO05D008347 1.5e-41 173.3 112 76.8
Cc06_g00270 Coffea canephora HOM05D002857 ORTHO05D008347 2.6e-41 172.6 110 76.4
arahy.Tifrunner.gnm1.ann1.AK2UKD Arachis hypogaea HOM05D002857 ORTHO05D008347 4.9e-40 168.3 109 78.0
arahy.Tifrunner.gnm1.ann1.9CW0PF Arachis hypogaea HOM05D002857 ORTHO05D008347 1.1e-39 167.2 112 75.0
arahy.Tifrunner.gnm1.ann1.JJ1SBB Arachis hypogaea HOM05D002857 ORTHO05D008347 2.4e-39 166.0 111 73.9
Ciclev10006219m.g Citrus clementina HOM05D002857 ORTHO05D008347 2.4e-39 166.0 106 77.4
Glyma.05G021200 Glycine max HOM05D002857 ORTHO05D008347 1.2e-38 163.7 108 71.3
Mapoly0121s0028 Marchantia polymorpha HOM05D002857 ORTHO05D008347 4.6e-38 161.8 164 46.3
Rhsim11G0151300 Rhododendron simsii HOM05D002133 ORTHO05D002256 7.8e-38 161.0 90 81.1
CBR_g3894 Chara braunii HOM05D002857 ORTHO05D008347 6.4e-32 141.4 127 55.1
SEGI_03434 Sequoiadendron giganteum HOM05D002857 ORTHO05D008347 3.3e-28 129.0 113 55.8
MCO12G139 Micromonas commoda HOM05D002857 ORTHO05D008347 4.5e-25 118.6 161 40.4
Cre05.g247150 Chlamydomonas reinhardtii HOM05D002857 ORTHO05D008347 8.4e-24 114.4 195 31.8
QL11p030572 Quercus lobata HOM05D002857 ORTHO05D008347 4.6e-22 108.6 53 86.8
Cfa021534 Carpinus fangiana HOM05D002857 ORTHO05D008347 5.6e-20 101.7 59 79.7
PRCOL_00006372 Prasinoderma coloniale HOM05D002857 ORTHO05D008347 5.6e-20 101.7 161 37.9
AUR62030843 Chenopodium quinoa HOM05D002857 ORTHO05D008347 1.3e-19 100.5 56 76.8
Sc18g0007410 Simmondsia chinensis HOM05D002857 ORTHO05D008347 2.6e-17 92.8 58 69.0
Sc18g0007450 Simmondsia chinensis HOM05D002857 ORTHO05D008347 2.6e-17 92.8 58 69.0
CARHR040040 Cardamine hirsuta HOM05D002857 ORTHO05D008347 1.8e-13 80.1 67 55.2
Nn5g29163 Nelumbo nucifera HOM05D002857 ORTHO05D008347 2.8e-11 72.8 38 86.8
Sabra16G0183400 Salix brachista HOM05D002857 ORTHO05D008347 5.5e-07 58.5 42 69.0


User provided reference genes

Program Settings