Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv15806 Davidia involucrata HOM05D006273 ORTHO05D007607 7.0e-84 313.9 159 100.0
Dinv42237 Davidia involucrata HOM05D006273 ORTHO05D007607 1.5e-25 120.2 71 85.9
Actinidia04385 Actinidia chinensis HOM05D002857 ORTHO05D007919 4.7e-24 115.2 72 80.6
Hma1.2p1_1059F.1_g252960 Hydrangea macrophylla HOM05D006273 ORTHO05D007607 4.2e-20 102.1 71 77.5
CiPaw.05G017700 Carya illinoinensis HOM05D006273 ORTHO05D007607 5.4e-20 101.7 71 74.6
Cfa004628 Carpinus fangiana HOM05D006273 ORTHO05D007607 7.1e-20 101.3 71 76.1
GSVIVG01037839001 Vitis vinifera HOM05D006273 ORTHO05D007607 1.2e-19 100.5 72 72.2
Cc02_g19850 Coffea canephora HOM05D006273 ORTHO05D007607 3.5e-19 99.0 69 76.8
Cpa.g.sc106.50 Carica papaya HOM05D006273 ORTHO05D007607 5.1e-18 95.1 69 71.0
Nn5g30577 Nelumbo nucifera HOM05D006273 ORTHO05D007607 6.6e-18 94.7 73 69.9
Manes.10G081700 Manihot esculenta HOM05D006273 ORTHO05D007607 8.7e-18 94.4 75 69.3
COL.COLO4_32516 Corchorus olitorius HOM05D006273 ORTHO05D007607 1.5e-17 93.6 71 71.8
QL11p030642 Quercus lobata HOM05D006273 ORTHO05D007607 1.9e-17 93.2 74 70.3
Atru.chr5.2357 Acer truncatum HOM05D006273 ORTHO05D007607 4.3e-17 92.0 72 68.1
TAR628G0174 Trochodendron aralioides HOM05D006273 ORTHO05D007607 5.6e-17 91.7 78 61.5
PGSC0003DMG400025745 Solanum tuberosum HOM05D006273 ORTHO05D007607 9.6e-17 90.9 68 66.2
Thecc.02G116800 Theobroma cacao HOM05D006273 ORTHO05D007607 9.6e-17 90.9 71 70.4
Actinidia00372 Actinidia chinensis HOM05D006273 ORTHO05D007607 6.2e-16 88.2 69 69.6
Duzib132G0234 Durio zibethinus HOM05D006273 ORTHO05D007607 6.2e-16 88.2 71 69.0
Prupe.8G144600 Prunus persica HOM05D006273 ORTHO05D007607 8.1e-16 87.8 71 63.4
Duzib248G0443 Durio zibethinus HOM05D006273 ORTHO05D007607 1.1e-15 87.4 71 67.6
CSS0045592 Camellia sinensis var. sinensis HOM05D006273 ORTHO05D007607 1.4e-15 87.0 71 64.8
Solyc01g107030.3 Solanum lycopersicum HOM05D006273 ORTHO05D007607 1.4e-15 87.0 68 64.7
Sopen01g049300 Solanum pennellii HOM05D006273 ORTHO05D007607 1.4e-15 87.0 68 64.7
Nitab4.5_0008075g0050 Nicotiana tabacum HOM05D006273 ORTHO05D007607 2.4e-15 86.3 70 62.9
Gohir.A12G019800 Gossypium hirsutum HOM05D006273 ORTHO05D007607 1.2e-14 84.0 68 67.6
Gohir.D12G020000 Gossypium hirsutum HOM05D006273 ORTHO05D007607 1.2e-14 84.0 68 67.6
Gorai.008G020400 Gossypium raimondii HOM05D006273 ORTHO05D007607 1.2e-14 84.0 68 67.6
DCAR_001698 Daucus carota HOM05D006273 ORTHO05D007607 2.6e-14 82.8 72 61.1
Actinidia27988 Actinidia chinensis HOM05D006273 ORTHO05D007607 7.6e-14 81.3 49 81.6
TWI23G0281 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 1.3e-13 80.5 72 62.5
Ciclev10028827m.g Citrus clementina HOM05D006273 ORTHO05D007607 2.2e-13 79.7 69 66.7
CSS0011953 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D007919 2.9e-13 79.3 48 79.2
CsaV3_4G000230 Cucumis sativus L. HOM05D006273 ORTHO05D007607 4.9e-13 78.6 75 61.3
MD05G1099900 Malus domestica HOM05D006273 ORTHO05D007607 4.9e-13 78.6 71 59.2
Potri.009G088600 Populus trichocarpa HOM05D006273 ORTHO05D007607 1.1e-12 77.4 69 68.1
MELO3C018010.2 Cucumis melo HOM05D006273 ORTHO05D007607 1.4e-12 77.0 75 61.3
Sabra09G0068600 Salix brachista HOM05D006273 ORTHO05D007607 1.4e-12 77.0 69 66.7
vmacro19532 Vaccinium macrocarpon HOM05D006273 ORTHO05D007607 2.1e-11 73.2 55 69.1
Lsat_1_v5_gn_5_114180 Lactuca sativa HOM05D006273 ORTHO05D007607 3.5e-11 72.4 55 65.5
ECA234G1150 Erigeron canadensis HOM05D006273 ORTHO05D007607 4.6e-11 72.0 70 57.1
Rhsim05G0090800 Rhododendron simsii HOM05D002857 ORTHO05D007919 6.0e-11 71.6 47 74.5
THA.LOC104815220 Tarenaya hassleriana HOM05D006273 ORTHO05D007607 1.0e-10 70.9 68 58.8
ClCG10G010280 Citrullus lanatus HOM05D006273 ORTHO05D007607 1.3e-10 70.5 75 58.7
TAR381G1192 Trochodendron aralioides HOM05D006273 ORTHO05D007607 1.3e-10 70.5 50 72.0
Lj5A219G34 Lonicera japonica HOM05D006273 ORTHO05D007607 1.7e-10 70.1 71 56.3
CANSAT25G0612 Cannabis sativa HOM05D006273 ORTHO05D007607 3.0e-10 69.3 65 58.5
Haze_10223 Corylus avellana HOM05D006273 ORTHO05D007607 3.9e-10 68.9 49 71.4
Nn1g04569 Nelumbo nucifera HOM05D006273 ORTHO05D007607 3.9e-10 68.9 71 53.5
RcHm_v2.0_Chr6g0253781 Rosa chinensis HOM05D006273 ORTHO05D007607 3.9e-10 68.9 76 55.3
MSTRG.5316 Avicennia marina HOM05D006273 ORTHO05D007607 5.1e-10 68.6 69 59.4
Carub.0003s1952 Capsella rubella HOM05D006273 ORTHO05D007607 5.1e-10 68.6 67 59.7
FAN15G3526 Fragaria x ananassa HOM05D006273 ORTHO05D007607 5.1e-10 68.6 66 54.5
CARHR095110 Cardamine hirsuta HOM05D006273 ORTHO05D007607 1.9e-09 66.6 68 57.4
Sc18g0007420 Simmondsia chinensis HOM05D006273 ORTHO05D007607 2.5e-09 66.2 66 54.5
Actinidia29964 Actinidia chinensis HOM05D003453 ORTHO05D023320 3.3e-09 65.9 58 60.3
FAN20G1056 Fragaria x ananassa HOM05D006273 ORTHO05D007607 3.3e-09 65.9 66 56.1
FvH4_2g04340 Fragaria vesca HOM05D006273 ORTHO05D007607 5.6e-09 65.1 65 61.5
FAN24G1968 Fragaria x ananassa HOM05D006273 ORTHO05D007607 5.6e-09 65.1 65 61.5
FAN24G2779 Fragaria x ananassa HOM05D006273 ORTHO05D007607 5.6e-09 65.1 65 61.5
Actinidia38507 Actinidia chinensis HOM05D003453 ORTHO05D004154 7.3e-09 64.7 59 57.6
PGR042G0373 Punica granatum HOM05D006273 ORTHO05D007607 1.3e-08 63.9 80 47.5
FAN27G2995 Fragaria x ananassa HOM05D006273 ORTHO05D007607 2.1e-08 63.2 66 51.5
HanXRQChr10g0292221 Helianthus annuus HOM05D006273 ORTHO05D007607 2.1e-08 63.2 60 55.0
Eucgr.G01219 Eucalyptus grandis HOM05D006273 ORTHO05D007607 1.1e-07 60.8 70 57.1
Thhalv10021227m.g Eutrema salsugineum HOM05D006273 ORTHO05D007607 1.1e-07 60.8 67 55.2
SalBow3G1994 Salvia bowleyana HOM05D006273 ORTHO05D007607 1.1e-07 60.8 105 43.8
FvH4_2g03741 Fragaria vesca HOM05D006273 ORTHO05D007607 1.4e-07 60.5 65 58.5
C05p45180 Brassica napus HOM05D006273 ORTHO05D007607 1.8e-07 60.1 66 57.6
PSO541G6083 Papaver somniferum HOM05D006273 ORTHO05D007607 1.8e-07 60.1 70 57.1
BolC5t33244H Brassica oleracea HOM05D000470 ORTHO05D000348 1.5e-06 57.0 75 52.0
ATR1153G071 Amborella trichopoda HOM05D006273 ORTHO05D007607 2.6e-06 56.2 68 54.4
FAN17G2237 Fragaria x ananassa HOM05D003453 ORTHO05D023320 3.4e-06 55.8 58 53.4
Oeu010445.1 Olea europaea HOM05D006273 ORTHO05D007607 5.8e-06 55.1 51 62.7
Oeu037282.1 Olea europaea HOM05D006273 ORTHO05D007607 5.8e-06 55.1 73 50.7
MBI19_g46225_MAGBIO Magnolia biondii HOM05D006273 ORTHO05D015157 9.9e-06 54.3 58 56.9
Sc18g0007460 Simmondsia chinensis HOM05D006273 ORTHO05D007607 9.9e-06 54.3 66 50.0


User provided reference genes

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