Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv15765 Davidia involucrata HOM05D005496 ORTHO05D006677 2.3e-142 508.8 252 100.0
Dinv42193 Davidia involucrata HOM05D005496 ORTHO05D006677 3.9e-137 491.5 252 94.8
CSS0023946 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 4.7e-135 484.6 250 93.6
CSS0028960 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 4.7e-135 484.6 250 93.6
DCAR_021987 Daucus carota HOM05D005496 ORTHO05D006677 2.2e-132 475.7 253 92.5
CSS0021038 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 5.4e-131 471.1 252 90.1
Cpa.g.sc106.90 Carica papaya HOM05D005496 ORTHO05D006677 1.6e-130 469.5 253 91.3
Atru.chr5.2543 Acer truncatum HOM05D005496 ORTHO05D006677 2.7e-130 468.8 254 90.9
Atru.chr5.2566 Acer truncatum HOM05D005496 ORTHO05D006677 2.7e-130 468.8 254 90.9
Gohir.D12G022500 Gossypium hirsutum HOM05D005496 ORTHO05D006677 2.7e-130 468.8 250 93.2
Thecc.02G107900 Theobroma cacao HOM05D005496 ORTHO05D006677 6.0e-130 467.6 253 92.1
Gohir.A12G022100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 7.8e-130 467.2 250 92.8
Actinidia17481 Actinidia chinensis HOM05D005496 ORTHO05D006677 8.6e-129 463.8 252 88.1
CiPaw.06G169300 Carya illinoinensis HOM05D005496 ORTHO05D006677 8.6e-129 463.8 254 90.2
RcHm_v2.0_Chr6g0255081 Rosa chinensis HOM05D005496 ORTHO05D006677 8.6e-129 463.8 254 90.2
FvH4_2g05170 Fragaria vesca HOM05D005496 ORTHO05D006677 1.1e-128 463.4 254 89.8
TWI75G0729 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 1.1e-128 463.4 253 90.9
TAR376G0359 Trochodendron aralioides HOM05D005496 ORTHO05D006677 1.5e-128 463.0 248 89.5
MD05G1089700 Malus domestica HOM05D005496 ORTHO05D006677 4.3e-128 461.5 255 89.8
TWI79G0817 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 7.3e-128 460.7 253 90.5
TAR628G1491 Trochodendron aralioides HOM05D005496 ORTHO05D006677 7.3e-128 460.7 248 88.7
CiPaw.05G011600 Carya illinoinensis HOM05D005496 ORTHO05D006677 1.2e-127 459.9 254 89.8
GSVIVG01003155001 Vitis vinifera HOM05D005496 ORTHO05D006677 1.6e-127 459.5 257 87.9
PGSC0003DMG402025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 2.1e-127 459.1 254 87.8
Prupe.8G135000 Prunus persica HOM05D005496 ORTHO05D006677 2.8e-127 458.8 250 90.4
Sopen01g049790 Solanum pennellii HOM05D005496 ORTHO05D006677 2.8e-127 458.8 254 87.4
Potri.009G095900 Populus trichocarpa HOM05D005496 ORTHO05D006677 3.6e-127 458.4 252 90.5
Solyc01g107600.3 Solanum lycopersicum HOM05D005496 ORTHO05D006677 6.2e-127 457.6 254 87.4
Manes.07G069764 Manihot esculenta HOM05D005496 ORTHO05D006677 8.1e-127 457.2 253 89.3
CANSAT25G1824 Cannabis sativa HOM05D005496 ORTHO05D006677 1.1e-126 456.8 255 87.8
CANSAT25G2648 Cannabis sativa HOM05D005496 ORTHO05D006677 1.1e-126 456.8 255 87.8
Actinidia27972 Actinidia chinensis HOM05D005496 ORTHO05D006677 2.3e-126 455.7 279 81.7
Aqoxy6G02861 Aquilegia oxysepala HOM05D005496 ORTHO05D006677 8.9e-126 453.8 248 87.1
FAN27G2869 Fragaria x ananassa HOM05D005496 ORTHO05D006677 1.5e-125 453.0 275 83.6
Sc18g0005590 Simmondsia chinensis HOM05D005496 ORTHO05D006677 1.5e-125 453.0 254 87.8
Cc02_g19260 Coffea canephora HOM05D005496 ORTHO05D006677 2.6e-125 452.2 261 85.8
Gohir.D01G008100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 2.6e-125 452.2 253 87.7
CsaV3_7G008130 Cucumis sativus L. HOM05D005496 ORTHO05D006677 7.5e-125 450.7 253 87.0
THA.LOC104807241 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 7.5e-125 450.7 253 86.6
ClCG02G006320 Citrullus lanatus HOM05D005496 ORTHO05D006677 1.3e-124 449.9 253 87.0
MD10G1096900 Malus domestica HOM05D005496 ORTHO05D006677 1.3e-124 449.9 255 87.5
MELO3C018493.2 Cucumis melo HOM05D005496 ORTHO05D006677 2.9e-124 448.7 253 86.6
PGR142G1113 Punica granatum HOM05D005496 ORTHO05D006677 2.9e-124 448.7 253 87.4
Thhalv10022824m.g Eutrema salsugineum HOM05D005496 ORTHO05D006677 4.9e-124 448.0 253 85.4
Potri.001G300100 Populus trichocarpa HOM05D005496 ORTHO05D006677 4.9e-124 448.0 252 88.5
MSTRG.5341 Avicennia marina HOM05D005496 ORTHO05D006677 6.4e-124 447.6 250 86.4
Migut.N01167 Erythranthe guttata HOM05D005496 ORTHO05D006677 6.4e-124 447.6 254 86.2
Carub.0003s2908 Capsella rubella HOM05D005496 ORTHO05D006677 8.3e-124 447.2 253 85.8
PSO675G7162 Papaver somniferum HOM05D005496 ORTHO05D006677 1.4e-123 446.4 248 85.5
MSTRG.27744 Avicennia marina HOM05D005496 ORTHO05D006677 2.4e-123 445.7 254 85.8
Eucgr.E02959 Eucalyptus grandis HOM05D005496 ORTHO05D006677 2.4e-123 445.7 253 87.0
Rhsim11G0160100 Rhododendron simsii HOM05D005496 ORTHO05D006677 2.4e-123 445.7 294 77.6
Lalb_Chr06g0165461 Lupinus albus HOM05D005496 ORTHO05D006677 3.2e-123 445.3 253 87.0
AT2G15240 Arabidopsis thaliana HOM05D005496 ORTHO05D006677 4.1e-123 444.9 253 85.0
Medtr1g107430 Medicago truncatula HOM05D005496 ORTHO05D006677 4.1e-123 444.9 258 85.3
Phvul.007G039900 Phaseolus vulgaris HOM05D005496 ORTHO05D006677 4.1e-123 444.9 256 84.8
AL3G46950 Arabidopsis lyrata HOM05D005496 ORTHO05D006677 5.4e-123 444.5 253 85.0
C07p08630 Brassica napus HOM05D005496 ORTHO05D006677 5.4e-123 444.5 253 85.4
Sed0023992 Sechium edule HOM05D005496 ORTHO05D006677 5.4e-123 444.5 253 85.0
TPR.G30567 Trifolium pratense HOM05D005496 ORTHO05D006677 5.4e-123 444.5 257 85.6
Lalb_Chr21g0308341 Lupinus albus HOM05D005496 ORTHO05D006677 7.1e-123 444.1 258 86.0
BcaB07g31795 Brassica carinata HOM05D005496 ORTHO05D006677 1.2e-122 443.4 253 85.0
PSO541G0750 Papaver somniferum HOM05D005496 ORTHO05D006677 1.2e-122 443.4 248 85.5
Sp3g28490 Schrenkiella parvula HOM05D005496 ORTHO05D006677 1.2e-122 443.4 250 85.2
Glyma.10G262300 Glycine max HOM05D005496 ORTHO05D006677 3.5e-122 441.8 256 84.4
BolC9t54157H Brassica oleracea HOM05D005496 ORTHO05D006677 4.6e-122 441.4 252 84.9
BraA07t28330Z Brassica rapa HOM05D005496 ORTHO05D006677 7.8e-122 440.7 256 84.4
Glyma.20G128700 Glycine max HOM05D005496 ORTHO05D006677 1.0e-121 440.3 259 84.2
Gorai.002G009400 Gossypium raimondii HOM05D005496 ORTHO05D006677 1.0e-121 440.3 253 85.8
Lj5g0001757 Lotus japonicus HOM05D005496 ORTHO05D006677 1.0e-121 440.3 253 85.8
Peaxi162Scf00016g02325 Petunia axillaris HOM05D005496 ORTHO05D006677 1.0e-121 440.3 280 78.6
Sed0010088 Sechium edule HOM05D005496 ORTHO05D006677 1.3e-121 439.9 254 85.4
A07p05380 Brassica napus HOM05D005496 ORTHO05D006677 2.3e-121 439.1 255 84.7
Ca_11075_v3 Cicer arietinum L. HOM05D005496 ORTHO05D006677 3.0e-121 438.7 257 84.0
THA.LOC104819553 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 5.1e-121 438.0 253 84.2
BolC7t41274H Brassica oleracea HOM05D005496 ORTHO05D006677 3.3e-120 435.3 238 87.8
arahy.Tifrunner.gnm1.ann1.7NM92S Arachis hypogaea HOM05D005496 ORTHO05D006677 6.8e-118 427.6 256 84.8
ATR0691G184 Amborella trichopoda HOM05D005496 ORTHO05D006677 1.5e-117 426.4 247 81.0
HanXRQChr16g0509221 Helianthus annuus HOM05D005496 ORTHO05D006677 2.0e-117 426.0 249 81.5
arahy.Tifrunner.gnm1.ann1.CE7Z9D Arachis hypogaea HOM05D005496 ORTHO05D006677 9.9e-117 423.7 256 83.6
FAN15G3658 Fragaria x ananassa HOM05D005496 ORTHO05D006677 8.4e-116 420.6 252 84.5
CARHR105630 Cardamine hirsuta HOM05D005496 ORTHO05D006677 7.1e-115 417.5 225 88.0
ECA236G0884 Erigeron canadensis HOM05D005496 ORTHO05D006677 7.1e-115 417.5 250 79.6
HanXRQChr10g0292361 Helianthus annuus HOM05D005496 ORTHO05D006677 1.2e-114 416.8 249 80.3
BcaC04g23051 Brassica carinata HOM05D005496 ORTHO05D006677 1.3e-113 413.3 226 87.2
A09p10680 Brassica napus HOM05D005496 ORTHO05D006677 8.1e-111 404.1 231 84.0
C09p12670 Brassica napus HOM05D005496 ORTHO05D006677 8.1e-111 404.1 231 84.0
Nn5g30423 Nelumbo nucifera HOM05D005496 ORTHO05D006677 4.4e-109 398.3 248 78.2
FAN24G2091 Fragaria x ananassa HOM05D005496 ORTHO05D006677 4.9e-108 394.8 254 79.9
BraA09t36711Z Brassica rapa HOM05D005496 ORTHO05D006677 7.1e-107 391.0 254 76.4
QL11p033686 Quercus lobata HOM05D005496 ORTHO05D006677 1.2e-106 390.2 452 51.1
Duzib052G0798 Durio zibethinus HOM05D005496 ORTHO05D006677 4.6e-106 388.3 250 79.2
Lsat_1_v5_gn_7_86500 Lactuca sativa HOM05D005496 ORTHO05D006677 1.0e-105 387.1 223 82.5
Os09g0109500 Oryza sativa ssp. japonica HOM05D005496 ORTHO05D006677 2.3e-105 386.0 248 77.0
Ciclev10029109m.g Citrus clementina HOM05D005496 ORTHO05D006677 7.3e-104 380.9 208 88.9
Pp3c22_1600 Physcomitrium patens HOM05D005496 ORTHO05D006677 6.2e-103 377.9 249 72.7
Gorai.008G022900 Gossypium raimondii HOM05D005496 ORTHO05D006677 1.4e-102 376.7 248 80.2
Aa31LG8G13100 Aethionema arabicum HOM05D005496 ORTHO05D006677 2.4e-102 375.9 255 76.5
Sabra16G0188400 Salix brachista HOM05D005496 ORTHO05D006677 2.4e-102 375.9 280 72.1
Gohir.A01G008000 Gossypium hirsutum HOM05D005496 ORTHO05D006677 3.4e-101 372.1 257 77.0
Pp3c21_16720 Physcomitrium patens HOM05D005496 ORTHO05D006677 7.6e-101 370.9 249 72.7
Mapoly0001s0126 Marchantia polymorpha HOM05D005496 ORTHO05D006677 9.9e-101 370.5 248 71.4
Psat6g219080 Pisum sativum HOM05D005496 ORTHO05D006677 2.4e-99 365.9 211 84.4
SMO358G0568 Selaginella moellendorffii HOM05D005496 ORTHO05D006677 3.1e-94 349.0 248 68.1
unitig_699.g19872 Utricularia gibba HOM05D005496 ORTHO05D006677 9.0e-94 347.4 208 81.2
Actinidia00410 Actinidia chinensis HOM05D005496 ORTHO05D006677 1.5e-93 346.7 240 72.5
AagrBONN_evm.TU.Sc2ySwM_228.4354 Anthoceros agrestis HOM05D005496 ORTHO05D006677 2.0e-93 346.3 235 70.6
BcaB03g16270 Brassica carinata HOM05D005496 ORTHO05D006677 2.6e-93 345.9 249 69.5
Hund00151 Selenicereus undatus HOM05D005496 ORTHO05D006677 2.6e-93 345.9 194 87.1
BcaC06g36040 Brassica carinata HOM05D005496 ORTHO05D006677 3.8e-92 342.0 199 82.9
Zm00001eb307360 Zea mays HOM05D005496 ORTHO05D006677 7.1e-91 337.8 248 70.6
Duzib132G0296 Durio zibethinus HOM05D005496 ORTHO05D006677 3.5e-90 335.5 253 70.4
AUR62039077 Chenopodium quinoa HOM05D005496 ORTHO05D006677 1.6e-87 326.6 268 66.4
vmacro02003 Vaccinium macrocarpon HOM05D005496 ORTHO05D006677 4.0e-86 322.0 336 57.7
CDE02G0272 Ceratophyllum demersum HOM05D005496 ORTHO05D006677 6.9e-86 321.2 248 62.9
Lj5C214T6 Lonicera japonica HOM05D005496 ORTHO05D006677 7.6e-85 317.8 206 80.6
Actinidia05496 Actinidia chinensis HOM05D005496 ORTHO05D006677 2.5e-83 312.8 282 61.7
Nitab4.5_0002815g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 4.6e-82 308.5 252 66.3
PGSC0003DMG401025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 5.1e-81 305.1 210 74.3
EL10Ac9g22275 Beta vulgaris HOM05D005496 ORTHO05D006677 3.2e-75 285.8 161 85.1
SGA_v2.0_scaffold13G06610 Striga asiatica HOM05D005496 ORTHO05D006677 1.2e-74 283.9 161 87.0
AUR62010309 Chenopodium quinoa HOM05D005496 ORTHO05D006677 2.7e-74 282.7 207 70.0
Cre06.g250350 Chlamydomonas reinhardtii HOM05D005496 ORTHO05D006677 1.1e-70 270.8 225 55.6
Sabra09G0073700 Salix brachista HOM05D005496 ORTHO05D006677 2.4e-70 269.6 284 55.6
Oeu056146.1 Olea europaea HOM05D005496 ORTHO05D006677 6.9e-70 268.1 170 78.2
MCO15G042 Micromonas commoda HOM05D005496 ORTHO05D006677 2.7e-66 256.1 228 53.5
FAN20G2824 Fragaria x ananassa HOM05D005496 ORTHO05D006677 7.9e-66 254.6 146 87.7
PRCOL_00006227 Prasinoderma coloniale HOM05D005496 ORTHO05D006677 8.8e-65 251.1 230 53.9
SalBow3G0726 Salvia bowleyana HOM05D005496 ORTHO05D006677 2.2e-60 236.5 206 61.7
Ah.01g018260 Amaranthus hybridus HOM05D005496 ORTHO05D006677 1.9e-59 233.4 180 67.8
HPP92_011625 Vanilla planifolia HOM05D005496 ORTHO05D006677 1.2e-58 230.7 145 73.8
BolC7t41273H Brassica oleracea HOM05D005496 ORTHO05D006677 1.1e-46 191.0 115 80.9
SEGI_40705 Sequoiadendron giganteum HOM05D005496 ORTHO05D006677 3.1e-46 189.5 112 80.4
Haze_10172 Corylus avellana HOM05D005496 ORTHO05D006677 1.5e-43 180.6 133 74.4
SEGI_21612 Sequoiadendron giganteum HOM05D005496 ORTHO05D006677 6.3e-39 165.2 91 84.6
Nitab4.5_0005392g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 1.6e-37 160.6 252 44.4
CBR_g4069 Chara braunii HOM05D005496 ORTHO05D006677 3.3e-35 152.9 92 76.1
COL.COLO4_32594 Corchorus olitorius HOM05D005496 ORTHO05D006677 9.5e-35 151.4 174 50.6
CBR_g4071 Chara braunii HOM05D000019 ORTHO05D000048 1.4e-30 137.5 102 70.6
HPP92_026155 Vanilla planifolia HOM05D005496 ORTHO05D006677 3.1e-17 93.2 51 80.4


User provided reference genes

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