Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv15761 Davidia involucrata HOM05D004451 ORTHO05D005177 7.4e-156 553.9 295 100.0
Actinidia00412 Actinidia chinensis HOM05D004451 ORTHO05D005177 4.3e-95 352.1 275 73.8
CSS0019678 Camellia sinensis var. sinensis HOM05D004451 ORTHO05D005177 1.2e-94 350.5 277 74.4
CSS0044080 Camellia sinensis var. sinensis HOM05D004451 ORTHO05D005177 2.3e-93 346.3 277 75.5
CSS0017890 Camellia sinensis var. sinensis HOM05D004451 ORTHO05D005177 6.8e-93 344.7 281 73.7
Hma1.2p1_0796F.1_g219180 Hydrangea macrophylla HOM05D004451 ORTHO05D005177 3.4e-92 342.4 273 70.3
Actinidia17478 Actinidia chinensis HOM05D004451 ORTHO05D005177 1.3e-91 340.5 276 73.2
Oeu018597.1 Olea europaea HOM05D004451 ORTHO05D005177 1.2e-89 334.0 273 70.7
Oeu010397.1 Olea europaea HOM05D004451 ORTHO05D005177 1.2e-86 323.9 273 70.3
SalBow6G6827 Salvia bowleyana HOM05D004451 ORTHO05D005177 8.9e-85 317.8 276 68.5
Prupe.8G134600 Prunus persica HOM05D004451 ORTHO05D005177 2.0e-84 316.6 272 66.5
Eucgr.E02954 Eucalyptus grandis HOM05D004451 ORTHO05D005177 5.8e-84 315.1 300 63.0
ECA234G3549 Erigeron canadensis HOM05D004451 ORTHO05D005177 2.2e-83 313.2 276 66.3
Cc02_g19230 Coffea canephora HOM05D004451 ORTHO05D005177 2.4e-82 309.7 274 67.9
Rhsim05G0088400 Rhododendron simsii HOM05D004451 ORTHO05D005177 2.4e-82 309.7 276 67.4
Actinidia05493 Actinidia chinensis HOM05D004451 ORTHO05D005177 4.2e-82 308.9 272 65.8
Migut.B00385 Erythranthe guttata HOM05D004451 ORTHO05D005177 4.2e-82 308.9 272 67.3
TAR381G0562 Trochodendron aralioides HOM05D004451 ORTHO05D005177 5.4e-82 308.5 280 68.2
Thecc.02G107400 Theobroma cacao HOM05D004451 ORTHO05D005177 9.2e-82 307.8 277 65.7
CANSAT25G0591 Cannabis sativa HOM05D004451 ORTHO05D005177 1.2e-81 307.4 281 66.5
CANSAT25G2876 Cannabis sativa HOM05D004451 ORTHO05D005177 1.6e-81 307.0 281 66.5
SGA_v2.0_scaffold32G13039 Striga asiatica HOM05D004451 ORTHO05D005177 1.6e-81 307.0 275 66.9
MSTRG.20184 Avicennia marina HOM05D004451 ORTHO05D005177 2.7e-81 306.2 272 66.5
MD05G1088600 Malus domestica HOM05D004451 ORTHO05D005177 6.0e-81 305.1 272 65.1
vmacro19448 Vaccinium macrocarpon HOM05D004451 ORTHO05D005177 6.0e-81 305.1 278 66.9
Lj5g0008999 Lotus japonicus HOM05D004451 ORTHO05D005177 7.8e-81 304.7 272 64.0
GSVIVG01003161001 Vitis vinifera HOM05D004451 ORTHO05D005177 1.3e-80 303.9 278 69.1
Atru.chr5.2587 Acer truncatum HOM05D004451 ORTHO05D005177 2.3e-80 303.1 272 65.8
Potri.001G300500 Populus trichocarpa HOM05D004451 ORTHO05D005177 3.9e-80 302.4 282 64.9
TAR628G0195 Trochodendron aralioides HOM05D004451 ORTHO05D005177 3.9e-80 302.4 274 67.5
RcHm_v2.0_Chr6g0255371 Rosa chinensis HOM05D004451 ORTHO05D005177 6.6e-80 301.6 272 65.8
AUR62039084 Chenopodium quinoa HOM05D004451 ORTHO05D005177 1.1e-79 300.8 273 65.6
VMungo0720G2723 Vigna mungo HOM05D004451 ORTHO05D005177 1.1e-79 300.8 274 66.1
Potri.009G096300 Populus trichocarpa HOM05D004451 ORTHO05D005177 4.3e-79 298.9 279 63.8
Duzib132G0413 Durio zibethinus HOM05D004451 ORTHO05D005177 5.6e-79 298.5 277 63.9
Nn1g04705 Nelumbo nucifera HOM05D004451 ORTHO05D005177 7.3e-79 298.1 273 67.8
Phvul.007G040300 Phaseolus vulgaris HOM05D004451 ORTHO05D005177 7.3e-79 298.1 274 65.7
COL.COLO4_32599 Corchorus olitorius HOM05D004451 ORTHO05D005177 1.6e-78 297.0 277 63.9
AUR62010302 Chenopodium quinoa HOM05D004451 ORTHO05D005177 2.1e-78 296.6 281 61.6
arahy.Tifrunner.gnm1.ann1.BMM90D Arachis hypogaea HOM05D004451 ORTHO05D005177 4.7e-78 295.4 277 66.1
arahy.Tifrunner.gnm1.ann1.S5NBXN Arachis hypogaea HOM05D004451 ORTHO05D005177 4.7e-78 295.4 280 66.1
Lj9C321G12 Lonicera japonica HOM05D004451 ORTHO05D005177 8.1e-78 294.7 183 82.0
Medtr1g107450 Medicago truncatula HOM05D004451 ORTHO05D005177 8.1e-78 294.7 272 65.8
Nitab4.5_0002815g0090 Nicotiana tabacum HOM05D004451 ORTHO05D005177 1.1e-77 294.3 272 66.2
Glyma.10G261800 Glycine max HOM05D004451 ORTHO05D005177 1.4e-77 293.9 274 65.0
Glyma.20G129100 Glycine max HOM05D004451 ORTHO05D005177 3.1e-77 292.7 272 64.7
Ciclev10029016m.g Citrus clementina HOM05D004451 ORTHO05D005177 4.0e-77 292.4 272 65.1
Duzib248G1610 Durio zibethinus HOM05D004451 ORTHO05D005177 4.0e-77 292.4 273 64.5
Gohir.D13G042200 Gossypium hirsutum HOM05D004451 ORTHO05D005177 4.0e-77 292.4 275 62.9
Nitab4.5_0005392g0030 Nicotiana tabacum HOM05D004451 ORTHO05D005177 4.0e-77 292.4 272 65.8
FAN20G1574 Fragaria x ananassa HOM05D004451 ORTHO05D005177 5.3e-77 292.0 273 64.5
Lsat_1_v5_gn_5_114881 Lactuca sativa HOM05D004451 ORTHO05D005177 9.0e-77 291.2 272 65.1
Cfa004574 Carpinus fangiana HOM05D004451 ORTHO05D005177 1.2e-76 290.8 277 63.2
Gohir.A13G043700 Gossypium hirsutum HOM05D004451 ORTHO05D005177 1.2e-76 290.8 275 63.6
QL11p033916 Quercus lobata HOM05D004451 ORTHO05D005177 1.5e-76 290.4 272 64.3
Manes.10G076300 Manihot esculenta HOM05D004451 ORTHO05D005177 2.6e-76 289.7 278 61.9
Sopen01g049830 Solanum pennellii HOM05D004451 ORTHO05D005177 3.4e-76 289.3 273 65.2
Gorai.013G047100 Gossypium raimondii HOM05D004451 ORTHO05D005177 4.4e-76 288.9 277 63.2
MD10G1096700 Malus domestica HOM05D004451 ORTHO05D005177 4.4e-76 288.9 272 62.5
PGR142G3187 Punica granatum HOM05D004451 ORTHO05D005177 4.4e-76 288.9 275 64.4
PGSC0003DMG400025865 Solanum tuberosum HOM05D004451 ORTHO05D005177 4.4e-76 288.9 273 66.3
Haze_10166 Corylus avellana HOM05D004451 ORTHO05D005177 5.8e-76 288.5 276 64.5
TWI31G0226 Tripterygium wilfordii HOM05D004451 ORTHO05D005177 5.8e-76 288.5 277 63.9
TWI79G0876 Tripterygium wilfordii HOM05D004451 ORTHO05D005177 5.8e-76 288.5 258 64.0
Cpa.g.sc106.89 Carica papaya HOM05D004451 ORTHO05D005177 7.6e-76 288.1 276 64.1
FAN27G3473 Fragaria x ananassa HOM05D004451 ORTHO05D005177 7.6e-76 288.1 273 63.7
HanXRQChr16g0514851 Helianthus annuus HOM05D004451 ORTHO05D005177 7.6e-76 288.1 272 63.2
Psat6g219200 Pisum sativum HOM05D004451 ORTHO05D005177 9.9e-76 287.7 274 63.9
Solyc01g107640.3 Solanum lycopersicum HOM05D004451 ORTHO05D005177 9.9e-76 287.7 273 64.1
Aqoxy5G01146 Aquilegia oxysepala HOM05D004451 ORTHO05D005177 2.2e-75 286.6 253 66.0
ClCG02G006310 Citrullus lanatus HOM05D004451 ORTHO05D005177 2.9e-75 286.2 283 62.9
Gorai.005G235200 Gossypium raimondii HOM05D004451 ORTHO05D005177 6.4e-75 285.0 283 60.8
Lalb_Chr06g0165471 Lupinus albus HOM05D004451 ORTHO05D005177 1.1e-74 284.3 277 64.3
Manes.07G069100 Manihot esculenta HOM05D004451 ORTHO05D005177 1.1e-74 284.3 276 63.0
FvH4_2g05240 Fragaria vesca HOM05D004451 ORTHO05D005177 1.4e-74 283.9 274 64.2
Sc17g0003020 Simmondsia chinensis HOM05D004451 ORTHO05D005177 1.4e-74 283.9 261 65.1
EL10Ac9g22281 Beta vulgaris HOM05D004451 ORTHO05D005177 2.4e-74 283.1 277 60.3
HanXRQChr10g0292341 Helianthus annuus HOM05D004451 ORTHO05D005177 2.4e-74 283.1 272 63.6
Hund06320 Selenicereus undatus HOM05D004451 ORTHO05D005177 2.4e-74 283.1 278 63.3
Ah.01g018220 Amaranthus hybridus HOM05D004451 ORTHO05D005177 3.2e-74 282.7 286 60.5
Gohir.A03G186500 Gossypium hirsutum HOM05D004451 ORTHO05D005177 4.2e-74 282.3 281 60.9
FAN15G2242 Fragaria x ananassa HOM05D004451 ORTHO05D005177 7.1e-74 281.6 285 61.1
CsaV3_7G008120 Cucumis sativus L. HOM05D004451 ORTHO05D005177 2.1e-73 280.0 274 63.9
Gohir.D02G207300 Gossypium hirsutum HOM05D004451 ORTHO05D005177 2.1e-73 280.0 282 61.0
Hund00148 Selenicereus undatus HOM05D004451 ORTHO05D005177 2.1e-73 280.0 272 60.3
Ca_11078_v3 Cicer arietinum L. HOM05D004451 ORTHO05D005177 1.0e-72 277.7 275 63.3
Nn5g30419 Nelumbo nucifera HOM05D004451 ORTHO05D005177 1.0e-72 277.7 276 62.3
MSTRG.16716 Avicennia marina HOM05D004451 ORTHO05D005177 1.3e-72 277.3 272 62.1
SGA_v2.0_scaffold225G43078 Striga asiatica HOM05D004451 ORTHO05D005177 5.1e-72 275.4 272 62.9
MELO3C018494.2 Cucumis melo HOM05D004451 ORTHO05D005177 6.6e-72 275.0 283 60.8
FAN24G2858 Fragaria x ananassa HOM05D004451 ORTHO05D005177 8.7e-72 274.6 274 62.0
Peaxi162Scf00016g02324 Petunia axillaris HOM05D004451 ORTHO05D005177 1.1e-71 274.2 275 62.2
Sed0001090 Sechium edule HOM05D004451 ORTHO05D005177 1.5e-71 273.9 277 62.5
THA.LOC104819557 Tarenaya hassleriana HOM05D004451 ORTHO05D005177 3.3e-71 272.7 285 59.3
CDE04G0259 Ceratophyllum demersum HOM05D004451 ORTHO05D005177 4.3e-71 272.3 172 82.0
Lalb_Chr02g0145321 Lupinus albus HOM05D004451 ORTHO05D005177 4.3e-71 272.3 275 61.8
Sed0013348 Sechium edule HOM05D004451 ORTHO05D005177 4.3e-71 272.3 280 59.6
CiPaw.05G011200 Carya illinoinensis HOM05D004451 ORTHO05D005177 5.6e-71 271.9 279 60.6
Rhsim11G0160300 Rhododendron simsii HOM05D004451 ORTHO05D005177 7.3e-71 271.6 313 55.0
DCAR_001641 Daucus carota HOM05D004451 ORTHO05D005177 1.3e-70 270.8 169 81.7
DCAR_021989 Daucus carota HOM05D004451 ORTHO05D005177 2.8e-70 269.6 268 60.4
PSO210G2671 Papaver somniferum HOM05D004451 ORTHO05D005177 6.2e-70 268.5 249 64.7
BcaB03g16278 Brassica carinata HOM05D004451 ORTHO05D005177 1.1e-69 267.7 188 75.0
Sabra16G0188700 Salix brachista HOM05D004451 ORTHO05D005177 1.1e-69 267.7 340 52.6
PSO170G0588 Papaver somniferum HOM05D004451 ORTHO05D005177 2.4e-69 266.5 249 64.3
CiPaw.06G169600 Carya illinoinensis HOM05D004451 ORTHO05D005177 6.9e-69 265.0 274 61.3
Aa31LG8G13140 Aethionema arabicum HOM05D004451 ORTHO05D005177 2.6e-68 263.1 188 73.4
A07p05320 Brassica napus HOM05D004451 ORTHO05D005177 2.6e-68 263.1 214 68.2
BraA07t28325Z Brassica rapa HOM05D004451 ORTHO05D005177 2.6e-68 263.1 214 68.2
THA.LOC104807244 Tarenaya hassleriana HOM05D004451 ORTHO05D005177 4.5e-68 262.3 191 71.7
Carub.0003s2912 Capsella rubella HOM05D004451 ORTHO05D005177 1.7e-67 260.4 273 59.3
CARHR105660 Cardamine hirsuta HOM05D004451 ORTHO05D005177 1.7e-67 260.4 278 59.7
vmacro19524 Vaccinium macrocarpon HOM05D004451 ORTHO05D005177 1.7e-67 260.4 296 56.1
Sabra09G0074000 Salix brachista HOM05D004451 ORTHO05D005177 8.4e-67 258.1 329 52.6
BcaC06g36051 Brassica carinata HOM05D004451 ORTHO05D005177 1.1e-66 257.7 276 59.8
A09p10690 Brassica napus HOM05D004451 ORTHO05D005177 1.1e-66 257.7 189 72.0
BolC7t41261H Brassica oleracea HOM05D004451 ORTHO05D005177 1.4e-66 257.3 273 60.4
C07p08470 Brassica napus HOM05D004451 ORTHO05D005177 2.4e-66 256.5 273 60.4
Thhalv10022775m.g Eutrema salsugineum HOM05D004451 ORTHO05D005177 3.2e-66 256.1 278 59.4
Sp3g28570 Schrenkiella parvula HOM05D004451 ORTHO05D005177 3.2e-66 256.1 280 56.8
BcaB07g31794 Brassica carinata HOM05D004451 ORTHO05D005177 5.4e-66 255.4 280 57.5
ATR0691G207 Amborella trichopoda HOM05D004451 ORTHO05D005177 1.2e-65 254.2 195 69.2
AT2G15290 Arabidopsis thaliana HOM05D004451 ORTHO05D005177 1.6e-65 253.8 278 59.4
BcaB08g34587 Brassica carinata HOM05D004451 ORTHO05D005177 1.6e-65 253.8 278 56.8
AL3G47010 Arabidopsis lyrata HOM05D004451 ORTHO05D005177 2.7e-65 253.1 283 57.2
BolC9t54158H Brassica oleracea HOM05D004451 ORTHO05D005177 2.7e-65 253.1 280 55.7
unitig_22.g5194 Utricularia gibba HOM05D004451 ORTHO05D005177 6.0e-65 251.9 272 55.1
HPP92_004770 Vanilla planifolia HOM05D004451 ORTHO05D005177 1.3e-64 250.8 274 56.2
Os06g0638100 Oryza sativa ssp. japonica HOM05D004451 ORTHO05D005177 6.7e-64 248.4 175 74.3
SEGI_03021 Sequoiadendron giganteum HOM05D004451 ORTHO05D005177 5.6e-63 245.4 204 65.2
C09p12690 Brassica napus HOM05D004451 ORTHO05D005177 7.4e-63 245.0 275 55.6
BcaC06g31580 Brassica carinata HOM05D004451 ORTHO05D005177 4.8e-62 242.3 167 76.0
Os02g0187600 Oryza sativa ssp. japonica HOM05D004451 ORTHO05D005177 6.2e-62 241.9 173 73.4
BcaC04g23051 Brassica carinata HOM05D005496 ORTHO05D006677 1.1e-61 241.1 268 55.6
ECA240G4367 Erigeron canadensis HOM05D004451 ORTHO05D005177 1.1e-61 241.1 276 57.6
Zm00001eb206410 Zea mays HOM05D004451 ORTHO05D005177 1.5e-60 237.3 164 73.8
Pp3c10_9500 Physcomitrium patens HOM05D004451 ORTHO05D005177 2.0e-60 236.9 175 70.3
Pp3c1_21740 Physcomitrium patens HOM05D004451 ORTHO05D005177 7.6e-60 235.0 175 69.7
Pp3c27_4260 Physcomitrium patens HOM05D004451 ORTHO05D005177 4.2e-58 229.2 217 59.0
Mapoly0049s0087 Marchantia polymorpha HOM05D004451 ORTHO05D005177 6.0e-57 225.3 173 69.4
Zm00001eb387350 Zea mays HOM05D004451 ORTHO05D005177 1.3e-56 224.2 254 54.7
BraA09t36712Z Brassica rapa HOM05D004451 ORTHO05D005177 3.3e-55 219.5 253 53.0
AagrBONN_evm.TU.Sc2ySwM_344.1281 Anthoceros agrestis HOM05D004451 ORTHO05D005177 7.4e-55 218.4 182 61.5
unitig_8.g3679 Utricularia gibba HOM05D004451 ORTHO05D005177 2.9e-51 206.5 292 47.3
CDE06G1648 Ceratophyllum demersum HOM05D004451 ORTHO05D005177 3.2e-50 203.0 219 56.6
SMO118G0560 Selaginella moellendorffii HOM05D004451 ORTHO05D005177 5.1e-48 195.7 169 60.4
CBR_g39267 Chara braunii HOM05D004451 ORTHO05D005177 2.6e-44 183.3 194 54.6
SHI05289 Sapria himalayana HOM05D004451 ORTHO05D005177 1.4e-40 171.0 170 55.9
vmacro02006 Vaccinium macrocarpon HOM05D004451 ORTHO05D005177 1.5e-36 157.5 168 56.0
CAN.G1231.10 Capsicum annuum HOM05D004451 ORTHO05D005177 1.2e-33 147.9 89 80.9
Zm00001eb234680 Zea mays HOM05D004451 ORTHO05D005177 2.8e-30 136.7 174 48.3
SEGI_11302 Sequoiadendron giganteum HOM05D004451 ORTHO05D005177 4.8e-30 136.0 124 58.9
TAR381G0937 Trochodendron aralioides HOM05D004451 ORTHO05D005177 8.5e-27 125.2 81 81.5
HPP92_008279 Vanilla planifolia HOM05D004451 ORTHO05D005177 5.2e-24 115.9 151 47.7
Cre10.g454734 Chlamydomonas reinhardtii HOM05D000133 ORTHO05D005177 7.4e-23 112.1 199 37.2
MCO10G127 Micromonas commoda HOM05D004451 ORTHO05D005177 7.4e-23 112.1 233 34.3
HanXRQChr17g0567381 Helianthus annuus HOM05D004451 ORTHO05D005177 1.6e-20 104.4 63 81.0
CBR_g28861 Chara braunii HOM05D004451 ORTHO05D009492 2.0e-20 104.0 96 56.2
HanXRQChr01g0018911 Helianthus annuus HOM05D004451 ORTHO05D005177 4.5e-20 102.8 63 79.4
PRCOL_00004645 Prasinoderma coloniale HOM05D004451 ORTHO05D005177 3.2e-18 96.7 192 37.0
HanXRQChr05g0151971 Helianthus annuus HOM05D002664 ORTHO05D002974 2.2e-11 73.9 42 81.0
Cre11.g467759 Chlamydomonas reinhardtii HOM05D027551 ORTHO05D005177 5.0e-11 72.8 159 33.3
CAN.G3385.1 Capsicum annuum HOM05D004451 ORTHO05D005177 1.5e-10 71.2 52 75.0
VMungo0251G3374 Vigna mungo HOM05D004451 ORTHO05D005177 8.3e-06 55.5 48 62.5


User provided reference genes

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