Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv15756 Davidia involucrata HOM05D005827 ORTHO05D005864 4.8e-77 291.2 158 100.0
Hma1.2p1_0796F.1_g219120 Hydrangea macrophylla HOM05D005827 ORTHO05D005864 2.2e-58 229.2 159 79.9
CSS0006486 Camellia sinensis var. sinensis HOM05D005827 ORTHO05D005864 6.1e-56 221.1 160 78.1
Rhsim11G0160600 Rhododendron simsii HOM05D005827 ORTHO05D005864 8.0e-56 220.7 157 77.7
Nitab4.5_0000209g0220 Nicotiana tabacum HOM05D005827 ORTHO05D005864 1.8e-52 209.5 158 70.9
vmacro14445 Vaccinium macrocarpon HOM05D005827 ORTHO05D005864 4.1e-52 208.4 157 75.2
Peaxi162Scf00880g00322 Petunia axillaris HOM05D005827 ORTHO05D005864 5.9e-51 204.5 158 70.3
Sopen12g028550 Solanum pennellii HOM05D005827 ORTHO05D005864 1.7e-50 203.0 158 70.3
Solyc12g056030.2 Solanum lycopersicum HOM05D005827 ORTHO05D005864 2.2e-50 202.6 158 70.3
Prupe.1G568500 Prunus persica HOM05D005827 ORTHO05D005864 3.8e-50 201.8 159 72.3
PGSC0003DMG400005012 Solanum tuberosum HOM05D005827 ORTHO05D005864 6.5e-50 201.1 158 69.6
Nitab4.5_0011210g0030 Nicotiana tabacum HOM05D000771 ORTHO05D005864 8.5e-50 200.7 157 67.5
Duzib132G0170 Durio zibethinus HOM05D005827 ORTHO05D005864 1.1e-49 200.3 160 70.6
Thecc.02G106700 Theobroma cacao HOM05D005827 ORTHO05D005864 1.0e-47 193.7 144 71.5
CiPaw.06G170100 Carya illinoinensis HOM05D005827 ORTHO05D005864 5.2e-47 191.4 159 68.6
Manes.10G074300 Manihot esculenta HOM05D005827 ORTHO05D005864 6.8e-47 191.0 161 70.2
Potri.009G097000 Populus trichocarpa HOM05D005827 ORTHO05D005864 2.0e-46 189.5 161 70.2
CAN.G517.16 Capsicum annuum HOM05D005827 ORTHO05D005864 5.7e-46 188.0 150 68.7
MD15G1423200 Malus domestica HOM05D005827 ORTHO05D005864 7.5e-46 187.6 159 67.3
Cc02_g19170 Coffea canephora HOM05D005827 ORTHO05D005864 1.7e-45 186.4 160 70.0
Eucgr.G01363 Eucalyptus grandis HOM05D005827 ORTHO05D005864 8.3e-45 184.1 158 65.2
Lj9A321T79 Lonicera japonica HOM05D005827 ORTHO05D005864 8.3e-45 184.1 199 57.8
Nitab4.5_0001647g0080 Nicotiana tabacum HOM05D005827 ORTHO05D005864 1.1e-44 183.7 145 67.6
Haze_10160 Corylus avellana HOM05D005827 ORTHO05D005864 3.5e-43 178.7 128 73.4
CANSAT11G0172 Cannabis sativa HOM05D005827 ORTHO05D005864 7.7e-43 177.6 130 73.8
Gorai.005G235500 Gossypium raimondii HOM05D005827 ORTHO05D005864 1.0e-42 177.2 131 71.8
MSTRG.27741 Avicennia marina HOM05D005827 ORTHO05D005864 1.3e-42 176.8 157 65.6
Gohir.A03G186800 Gossypium hirsutum HOM05D005827 ORTHO05D005864 1.7e-42 176.4 131 71.0
Atru.chr5.2579 Acer truncatum HOM05D005827 ORTHO05D005864 6.5e-42 174.5 161 63.4
TAR625G0497 Trochodendron aralioides HOM05D005827 ORTHO05D005864 1.1e-41 173.7 161 65.2
TAR625G1254 Trochodendron aralioides HOM05D005827 ORTHO05D005864 1.1e-41 173.7 161 65.2
FAN04G0262 Fragaria x ananassa HOM05D005827 ORTHO05D005864 1.9e-41 172.9 144 66.0
QL11p034047 Quercus lobata HOM05D005827 ORTHO05D005864 1.9e-41 172.9 158 64.6
Gohir.D02G207600 Gossypium hirsutum HOM05D005827 ORTHO05D005864 4.2e-41 171.8 131 71.0
Nn1g04717 Nelumbo nucifera HOM05D005827 ORTHO05D005864 5.5e-41 171.4 157 65.0
THA.LOC104823732 Tarenaya hassleriana HOM05D005827 ORTHO05D005864 5.5e-41 171.4 161 61.5
DCAR_029081 Daucus carota HOM05D005827 ORTHO05D005864 7.2e-41 171.0 160 64.4
ECA234G2840 Erigeron canadensis HOM05D005827 ORTHO05D005864 2.7e-40 169.1 132 68.2
Cpa.g.sc246.10 Carica papaya HOM05D005827 ORTHO05D005864 6.1e-40 167.9 160 62.5
QL11p033993 Quercus lobata HOM05D005827 ORTHO05D005864 8.0e-40 167.5 152 64.5
RcHm_v2.0_Chr7g0222441 Rosa chinensis HOM05D005827 ORTHO05D005864 8.0e-40 167.5 130 70.0
FAN08G1793 Fragaria x ananassa HOM05D005827 ORTHO05D005864 2.3e-39 166.0 165 60.6
Sabra09G0074500 Salix brachista HOM05D005827 ORTHO05D005864 2.3e-39 166.0 189 56.1
FAN18G4374 Fragaria x ananassa HOM05D005827 ORTHO05D005864 6.8e-39 164.5 166 59.6
Lsat_1_v5_gn_5_114720 Lactuca sativa HOM05D005827 ORTHO05D005864 8.8e-39 164.1 140 67.1
GSVIVG01003168001 Vitis vinifera HOM05D005827 ORTHO05D005864 8.8e-39 164.1 159 62.9
FAN13G0291 Fragaria x ananassa HOM05D005827 ORTHO05D005864 1.2e-38 163.7 166 58.4
FvH4_5g29540 Fragaria vesca HOM05D005827 ORTHO05D005864 1.5e-38 163.3 166 59.6
HanXRQChr16g0514881 Helianthus annuus HOM05D005827 ORTHO05D005864 1.5e-38 163.3 159 62.3
COL.COLO4_32605 Corchorus olitorius HOM05D005827 ORTHO05D005864 2.0e-38 162.9 164 59.8
Sabra09G0074600 Salix brachista HOM05D005827 ORTHO05D005864 1.7e-37 159.8 159 61.0
A02p32240 Brassica napus HOM05D005827 ORTHO05D005864 3.7e-37 158.7 152 60.5
BraA02t08240Z Brassica rapa HOM05D005827 ORTHO05D005864 3.7e-37 158.7 152 60.5
BcaC03g17064 Brassica carinata HOM05D005827 ORTHO05D005864 4.9e-37 158.3 152 60.5
BolC2t11063H Brassica oleracea HOM05D005827 ORTHO05D005864 1.4e-36 156.8 152 59.9
C02p49840 Brassica napus HOM05D005827 ORTHO05D005864 1.8e-36 156.4 152 59.9
BcaB07g30381 Brassica carinata HOM05D005827 ORTHO05D005864 3.1e-36 155.6 152 59.9
Migut.N01172 Erythranthe guttata HOM05D005827 ORTHO05D005864 9.2e-36 154.1 158 57.6
MD08G1229200 Malus domestica HOM05D005827 ORTHO05D005864 9.2e-36 154.1 132 65.9
Sp2g13090 Schrenkiella parvula HOM05D005827 ORTHO05D005864 2.0e-35 152.9 151 59.6
Actinidia00415 Actinidia chinensis HOM05D005827 ORTHO05D005864 4.5e-35 151.8 100 84.0
EL10Ac9g22299 Beta vulgaris HOM05D005827 ORTHO05D005864 5.9e-35 151.4 160 56.9
SGA_v2.0_scaffold42G16001 Striga asiatica HOM05D005827 ORTHO05D005864 1.0e-34 150.6 160 58.1
Carub.0005s0059 Capsella rubella HOM05D005827 ORTHO05D005864 1.3e-34 150.2 151 59.6
AUR62010278 Chenopodium quinoa HOM05D005827 ORTHO05D005864 1.7e-34 149.8 159 56.0
Aqoxy5G03364 Aquilegia oxysepala HOM05D005827 ORTHO05D005864 2.9e-34 149.1 156 59.0
ClCG04G002790 Citrullus lanatus HOM05D005827 ORTHO05D005864 6.6e-34 147.9 153 55.6
AL5G10740 Arabidopsis lyrata HOM05D005827 ORTHO05D005864 1.1e-33 147.1 126 65.1
AT2G01640 Arabidopsis thaliana HOM05D005827 ORTHO05D005864 1.5e-33 146.7 131 63.4
SalBow3G3341 Salvia bowleyana HOM05D005827 ORTHO05D005864 1.5e-33 146.7 171 52.6
Sc08g0001470 Simmondsia chinensis HOM05D005827 ORTHO05D005864 1.9e-33 146.4 136 61.8
Ca_30413_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 2.5e-33 146.0 164 56.1
PSO170G4182 Papaver somniferum HOM05D005827 ORTHO05D005864 2.1e-32 142.9 157 54.1
Eucgr.H03226 Eucalyptus grandis HOM05D005827 ORTHO05D005864 2.8e-32 142.5 126 64.3
TAR381G1673 Trochodendron aralioides HOM05D005827 ORTHO05D005864 6.1e-32 141.4 134 64.9
Sed0003004 Sechium edule HOM05D005827 ORTHO05D005864 8.0e-32 141.0 161 54.7
CsaV3_4G029930 Cucumis sativus L. HOM05D005827 ORTHO05D005864 1.4e-31 140.2 159 50.3
PGR042G1992 Punica granatum HOM05D005827 ORTHO05D005864 4.0e-31 138.7 164 53.0
Thhalv10005665m.g Eutrema salsugineum HOM05D005827 ORTHO05D005864 1.2e-30 137.1 173 51.4
Lalb_Chr21g0308391 Lupinus albus HOM05D005827 ORTHO05D005864 1.5e-30 136.7 163 52.8
PSO210G1068 Papaver somniferum HOM05D005827 ORTHO05D005864 4.4e-30 135.2 157 53.5
SGA_v2.0_scaffold393G50707 Striga asiatica HOM05D005827 ORTHO05D005864 5.7e-30 134.8 154 54.5
Phvul.007G038800 Phaseolus vulgaris HOM05D005827 ORTHO05D005864 2.9e-29 132.5 162 55.6
Glyma.12G113700 Glycine max HOM05D005827 ORTHO05D005864 3.7e-29 132.1 151 54.3
TWI31G0230 Tripterygium wilfordii HOM05D005827 ORTHO05D005864 6.4e-29 131.3 156 56.4
Ciclev10030223m.g Citrus clementina HOM05D005827 ORTHO05D005864 4.1e-28 128.6 116 62.1
Ca_06388_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 7.0e-28 127.9 136 55.9
Aa31LG2G8260 Aethionema arabicum HOM05D005827 ORTHO05D005864 3.5e-27 125.6 128 57.8
CDE01G0172 Ceratophyllum demersum HOM05D005827 ORTHO05D005864 4.6e-27 125.2 162 50.6
Zm00001eb133530 Zea mays HOM05D005827 ORTHO05D005864 7.8e-27 124.4 153 50.3
unitig_94.g28296 Utricularia gibba HOM05D005827 ORTHO05D005864 1.0e-26 124.0 162 49.4
unitig_94.g28309 Utricularia gibba HOM05D005827 ORTHO05D005864 1.0e-26 124.0 162 49.4
arahy.Tifrunner.gnm1.ann1.M92LVR Arachis hypogaea HOM05D005827 ORTHO05D005864 3.9e-26 122.1 150 49.3
MELO3C003274.2 Cucumis melo HOM05D005827 ORTHO05D005864 5.0e-26 121.7 134 55.2
Os12g0244500 Oryza sativa ssp. japonica HOM05D005827 ORTHO05D005864 9.5e-25 117.5 140 53.6
arahy.Tifrunner.gnm1.ann1.HL4A43 Arachis hypogaea HOM05D005827 ORTHO05D005864 6.2e-24 114.8 152 46.1
Hund00127 Selenicereus undatus HOM05D005827 ORTHO05D005864 4.0e-23 112.1 134 55.2
Psat6g219720 Pisum sativum HOM05D005827 ORTHO05D005864 1.2e-22 110.5 171 46.2
Glyma.20G127400 Glycine max HOM05D005827 ORTHO05D005864 2.6e-22 109.4 151 49.0
Nn2g12688 Nelumbo nucifera HOM05D005827 ORTHO05D005864 2.6e-22 109.4 90 71.1
HPP92_026144 Vanilla planifolia HOM05D005827 ORTHO05D005864 5.8e-22 108.2 159 45.9
Hund00128 Selenicereus undatus HOM05D005827 ORTHO05D005864 3.7e-21 105.5 135 52.6
Lj5g0000760 Lotus japonicus HOM05D005827 ORTHO05D005864 4.1e-20 102.1 107 57.0
Aa31sc215G30 Aethionema arabicum HOM05D005827 ORTHO05D005864 9.2e-20 100.9 118 54.2
TPR.G13876 Trifolium pratense HOM05D005827 ORTHO05D005864 2.0e-19 99.8 115 53.0
Lj3g0023632 Lotus japonicus HOM05D005827 ORTHO05D005864 2.7e-19 99.4 107 56.1
ATR0827G109 Amborella trichopoda HOM05D005827 ORTHO05D005864 1.7e-18 96.7 145 44.1
MELO3C033554.2 Cucumis melo HOM05D005827 ORTHO05D005864 6.6e-18 94.7 103 52.4
CiPaw.07G088900 Carya illinoinensis HOM05D005827 ORTHO05D005864 1.9e-17 93.2 92 56.5
QL11p034007 Quercus lobata HOM05D005827 ORTHO05D005864 3.3e-17 92.4 100 55.0
MD05G1087800 Malus domestica HOM05D005827 ORTHO05D005864 5.6e-17 91.7 123 48.0
AUR62044681 Chenopodium quinoa HOM05D005827 ORTHO05D005864 4.0e-15 85.5 76 59.2
AUR62039111 Chenopodium quinoa HOM05D005827 ORTHO05D005864 5.2e-15 85.1 86 54.7
Medtr1g107495 Medicago truncatula HOM05D005827 ORTHO05D005864 2.6e-14 82.8 112 46.4
Zm00001eb350190 Zea mays HOM05D005827 ORTHO05D005864 2.6e-14 82.8 117 50.4
SEGI_38856 Sequoiadendron giganteum HOM05D005827 ORTHO05D005864 5.8e-14 81.6 146 39.7
Zm00001eb006370 Zea mays HOM05D005827 ORTHO05D005864 1.3e-13 80.5 84 56.0
SMO364G0308 Selaginella moellendorffii HOM05D005827 ORTHO05D000003 3.7e-13 79.0 113 40.7
Zm00001eb207600 Zea mays HOM05D005827 ORTHO05D005864 6.4e-13 78.2 108 46.3
Zm00001eb324360 Zea mays HOM05D005827 ORTHO05D005864 1.1e-12 77.4 94 54.3
SMO364G0554 Selaginella moellendorffii HOM05D005827 ORTHO05D005864 4.1e-12 75.5 122 41.8
Zm00001eb259520 Zea mays HOM05D005827 ORTHO05D005864 4.1e-12 75.5 102 51.0
ATR0691G195 Amborella trichopoda HOM05D005827 ORTHO05D005864 9.2e-12 74.3 78 50.0
Pp3c21_2370 Physcomitrium patens HOM05D005827 ORTHO05D005864 1.2e-11 73.9 143 39.2
Zm00001eb091410 Zea mays HOM05D005827 ORTHO05D005864 1.2e-11 73.9 105 50.5
Zm00001eb324920 Zea mays HOM05D005827 ORTHO05D005864 6.0e-11 71.6 102 52.0
CANSAT25G3357 Cannabis sativa HOM05D005827 ORTHO05D005864 1.7e-10 70.1 82 50.0
Mapoly0052s0016 Marchantia polymorpha HOM05D005827 ORTHO05D005864 2.5e-09 66.2 135 40.7
ClCG01G025500 Citrullus lanatus HOM05D005827 ORTHO05D005864 4.3e-09 65.5 140 35.7
AagrBONN_evm.TU.Sc2ySwM_228.4380 Anthoceros agrestis HOM05D005827 ORTHO05D005864 3.1e-07 59.3 94 42.6
Ah.01g018070 Amaranthus hybridus HOM05D007150 ORTHO05D008994 5.2e-07 58.5 68 51.5


User provided reference genes

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