Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv15702 Davidia involucrata HOM05D005786 ORTHO05D006946 5.7e-162 574.3 320 100.0
Dinv29083 Davidia involucrata HOM05D005786 ORTHO05D006946 1.0e-126 457.2 323 77.1
Actinidia06794 Actinidia chinensis HOM05D005786 ORTHO05D006946 2.3e-118 429.5 305 73.8
CSS0002276 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 3.0e-118 429.1 322 73.0
Thecc.05G189200 Theobroma cacao HOM05D005786 ORTHO05D006946 1.3e-116 423.7 296 73.3
Duzib235G1473 Durio zibethinus HOM05D005786 ORTHO05D006946 1.4e-115 420.2 305 72.5
GSVIVG01019061001 Vitis vinifera HOM05D005786 ORTHO05D006946 1.7e-113 413.3 318 71.7
Gohir.A02G112711 Gossypium hirsutum HOM05D005786 ORTHO05D006946 2.4e-112 409.5 308 70.8
Gohir.D03G060604 Gossypium hirsutum HOM05D005786 ORTHO05D006946 5.5e-112 408.3 308 70.5
Prupe.6G363100 Prunus persica HOM05D005786 ORTHO05D006946 9.3e-112 407.5 317 72.9
Cfa006249 Carpinus fangiana HOM05D005786 ORTHO05D006946 2.7e-111 406.0 307 73.3
Gorai.002G056000 Gossypium raimondii HOM05D005786 ORTHO05D006946 3.5e-111 405.6 311 70.4
Lj1A579T43 Lonicera japonica HOM05D005786 ORTHO05D006946 3.5e-111 405.6 349 63.9
TAR633G0414 Trochodendron aralioides HOM05D005786 ORTHO05D006946 5.1e-110 401.7 304 71.7
Nn7g37593 Nelumbo nucifera HOM05D005786 ORTHO05D006946 3.3e-109 399.1 306 70.9
Oeu034777.1 Olea europaea HOM05D005786 ORTHO05D006946 1.3e-108 397.1 308 68.8
Manes.13G003500 Manihot esculenta HOM05D005786 ORTHO05D006946 2.1e-108 396.4 312 71.8
MD04G1246900 Malus domestica HOM05D005786 ORTHO05D006946 6.2e-108 394.8 309 68.9
MD12G1263300 Malus domestica HOM05D005786 ORTHO05D006946 1.4e-107 393.7 313 70.6
CiPaw.07G082100 Carya illinoinensis HOM05D005786 ORTHO05D006946 3.1e-107 392.5 312 69.9
Ciclev10012322m.g Citrus clementina HOM05D005786 ORTHO05D006946 7.6e-106 387.9 317 67.2
RcHm_v2.0_Chr3g0447611 Rosa chinensis HOM05D005786 ORTHO05D006946 2.2e-105 386.3 311 68.5
Ca_08003_v3 Cicer arietinum L. HOM05D005786 ORTHO05D006946 4.2e-104 382.1 308 68.5
FvH4_6g00240 Fragaria vesca HOM05D005786 ORTHO05D006946 4.2e-104 382.1 299 66.6
CANSAT54G1960 Cannabis sativa HOM05D005786 ORTHO05D006946 7.1e-104 381.3 312 66.7
TWI18G0853 Tripterygium wilfordii HOM05D005786 ORTHO05D006946 7.1e-104 381.3 303 66.0
AL2G20300 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 9.3e-104 380.9 291 69.8
Potri.019G055100 Populus trichocarpa HOM05D005786 ORTHO05D006946 1.6e-103 380.2 303 68.0
AT1G65270 Arabidopsis thaliana HOM05D005786 ORTHO05D006946 4.6e-103 378.6 291 69.4
Medtr7g080350 Medicago truncatula HOM05D005786 ORTHO05D006946 6.0e-103 378.3 291 69.8
Aqoxy5G04319 Aquilegia oxysepala HOM05D005786 ORTHO05D006946 2.3e-102 376.3 297 69.0
Lalb_Chr03g0038061 Lupinus albus HOM05D005786 ORTHO05D006946 2.3e-102 376.3 313 63.6
Migut.F01861 Erythranthe guttata HOM05D005786 ORTHO05D006946 3.0e-102 375.9 309 66.7
VMungo1383G2134 Vigna mungo HOM05D005786 ORTHO05D006946 3.0e-102 375.9 314 65.0
Carub.0002s1084 Capsella rubella HOM05D005786 ORTHO05D006946 3.9e-102 375.6 294 69.0
PGR031G0068 Punica granatum HOM05D005786 ORTHO05D006946 3.9e-102 375.6 326 63.2
Phvul.008G052600 Phaseolus vulgaris HOM05D005786 ORTHO05D006946 1.1e-101 374.0 319 63.6
TPR.G33911 Trifolium pratense HOM05D005786 ORTHO05D006946 1.1e-101 374.0 315 63.8
C04p43640 Brassica napus HOM05D005786 ORTHO05D006946 1.5e-101 373.6 306 65.7
THA.LOC104805701 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 1.5e-101 373.6 302 64.9
THA.LOC104823809 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 1.5e-101 373.6 279 66.7
Cc09_g03910 Coffea canephora HOM05D005786 ORTHO05D006946 5.7e-101 371.7 307 65.5
Thhalv10004459m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 5.7e-101 371.7 308 65.3
PSO832G0344 Papaver somniferum HOM05D005786 ORTHO05D006946 5.7e-101 371.7 309 65.4
BraA04t16680Z Brassica rapa HOM05D005786 ORTHO05D006946 7.4e-101 371.3 313 64.5
ECA232G2695 Erigeron canadensis HOM05D005786 ORTHO05D006946 1.3e-100 370.5 293 65.9
arahy.Tifrunner.gnm1.ann1.K5KE50 Arachis hypogaea HOM05D005786 ORTHO05D006946 1.6e-100 370.2 315 63.5
BcaB05g24100 Brassica carinata HOM05D005786 ORTHO05D006946 1.6e-100 370.2 289 64.7
BcaB06g27020 Brassica carinata HOM05D005786 ORTHO05D006946 1.6e-100 370.2 307 65.5
BcaC02g09515 Brassica carinata HOM05D005786 ORTHO05D006946 1.6e-100 370.2 306 65.0
CARHR056920 Cardamine hirsuta HOM05D005786 ORTHO05D006946 1.6e-100 370.2 291 68.4
PSO210G0333 Papaver somniferum HOM05D005786 ORTHO05D006946 2.1e-100 369.8 309 65.0
HanXRQChr04g0101081 Helianthus annuus HOM05D005786 ORTHO05D006946 2.8e-100 369.4 307 63.8
Lsat_1_v5_gn_0_14820 Lactuca sativa HOM05D005786 ORTHO05D006946 2.8e-100 369.4 309 64.1
Sp7g05900 Schrenkiella parvula HOM05D005786 ORTHO05D006946 3.7e-100 369.0 308 64.6
arahy.Tifrunner.gnm1.ann1.BC747V Arachis hypogaea HOM05D005786 ORTHO05D006946 6.3e-100 368.2 311 63.7
MSTRG.335 Avicennia marina HOM05D005786 ORTHO05D006946 6.3e-100 368.2 315 64.4
Sc16g0010480 Simmondsia chinensis HOM05D005786 ORTHO05D006946 6.3e-100 368.2 307 64.5
Aa31LG2G2390 Aethionema arabicum HOM05D005786 ORTHO05D006946 8.2e-100 367.9 295 64.7
CAN.G37.2 Capsicum annuum HOM05D005786 ORTHO05D006946 2.4e-99 366.3 310 65.5
HPP92_023718 Vanilla planifolia HOM05D005786 ORTHO05D006946 3.1e-99 365.9 307 62.5
Atru.chr12.1725 Acer truncatum HOM05D005786 ORTHO05D006946 6.9e-99 364.8 278 74.1
Lj1g0012134 Lotus japonicus HOM05D005786 ORTHO05D006946 6.9e-99 364.8 309 66.3
Thhalv10018947m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 9.0e-99 364.4 294 62.9
Hund07363 Selenicereus undatus HOM05D005786 ORTHO05D006946 1.2e-98 364.0 321 68.2
A04p10160 Brassica napus HOM05D005786 ORTHO05D006946 2.0e-98 363.2 303 63.7
BraA02t06369Z Brassica rapa HOM05D005786 ORTHO05D006946 5.9e-98 361.7 283 64.0
DCAR_030004 Daucus carota HOM05D005786 ORTHO05D006946 1.0e-97 360.9 299 65.2
A02p13150 Brassica napus HOM05D005786 ORTHO05D006946 1.3e-97 360.5 283 65.4
Sp5g19940 Schrenkiella parvula HOM05D005786 ORTHO05D006946 2.2e-97 359.8 293 63.8
Sopen04g017810 Solanum pennellii HOM05D005786 ORTHO05D006946 6.5e-97 358.2 295 65.4
MBI07_g02892_MAGBIO Magnolia biondii HOM05D005786 ORTHO05D006946 8.5e-97 357.8 233 76.4
Sed0025282 Sechium edule HOM05D005786 ORTHO05D006946 1.9e-96 356.7 306 65.0
Sabra19G0064300 Salix brachista HOM05D005786 ORTHO05D006946 7.2e-96 354.8 342 59.1
CsaV3_1G044270 Cucumis sativus L. HOM05D005786 ORTHO05D006946 2.1e-95 353.2 316 61.4
FAN05G2398 Fragaria x ananassa HOM05D005786 ORTHO05D006946 3.6e-95 352.4 318 61.9
Nitab4.5_0003825g0070 Nicotiana tabacum HOM05D005786 ORTHO05D006946 3.6e-95 352.4 296 65.2
Glyma.18G244000 Glycine max HOM05D005786 ORTHO05D006946 7.9e-95 351.3 289 65.4
SalBow6G2392 Salvia bowleyana HOM05D005786 ORTHO05D006946 3.0e-94 349.4 299 62.2
Glyma.09G248700 Glycine max HOM05D005786 ORTHO05D006946 1.9e-93 346.7 311 61.1
FAN09G1835 Fragaria x ananassa HOM05D005786 ORTHO05D006946 2.5e-93 346.3 318 60.7
MELO3C010021.2 Cucumis melo HOM05D005786 ORTHO05D006946 4.3e-93 345.5 311 61.7
C02p21270 Brassica napus HOM05D005786 ORTHO05D006946 2.2e-92 343.2 296 60.1
EL10Ac4g10004 Beta vulgaris HOM05D005786 ORTHO05D006946 6.9e-91 338.2 296 68.2
ATR0743G231 Amborella trichopoda HOM05D005786 ORTHO05D006946 1.1e-88 330.9 304 60.2
FAN14G0011 Fragaria x ananassa HOM05D005786 ORTHO05D006946 1.1e-88 330.9 326 57.4
CSS0048270 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 5.5e-88 328.6 245 80.0
Lsat_1_v5_gn_2_63981 Lactuca sativa HOM05D005786 ORTHO05D006946 3.6e-87 325.9 305 60.0
Peaxi162Scf01053g00210 Petunia axillaris HOM05D005786 ORTHO05D006946 1.1e-85 320.9 300 60.0
Nitab4.5_0000248g0060 Nicotiana tabacum HOM05D005786 ORTHO05D006946 7.4e-85 318.2 296 60.8
CDE04G1735 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 9.7e-85 317.8 306 58.2
SGA_v2.0_scaffold340G49308 Striga asiatica HOM05D005786 ORTHO05D006946 2.2e-84 316.6 312 59.0
AUR62006638 Chenopodium quinoa HOM05D005786 ORTHO05D006946 1.1e-83 314.3 323 59.8
CDE07G0365 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 1.2e-82 310.8 301 58.5
SEGI_32803 Sequoiadendron giganteum HOM05D005786 ORTHO05D006946 4.4e-77 292.4 300 52.7
Os11g0264600 Oryza sativa ssp. japonica HOM05D005786 ORTHO05D006946 1.7e-76 290.4 231 62.8
Zm00001eb168750 Zea mays HOM05D005786 ORTHO05D006946 2.8e-76 289.7 293 54.3
unitig_0.g385 Utricularia gibba HOM05D005786 ORTHO05D006946 2.6e-74 283.1 308 52.6
CARHR216460 Cardamine hirsuta HOM05D005786 ORTHO05D006946 7.7e-74 281.6 198 70.2
Actinidia03265 Actinidia chinensis HOM05D005786 ORTHO05D006946 2.3e-70 270.0 183 75.4
Psat3g102080 Pisum sativum HOM05D005786 ORTHO05D006946 1.6e-58 230.7 210 59.5
BcaC03g14691 Brassica carinata HOM05D005786 ORTHO05D006946 6.5e-57 225.3 200 60.0
Solyc04g047720.4 Solanum lycopersicum HOM05D005786 ORTHO05D006946 2.8e-55 219.9 195 61.5
Eucgr.H01412 Eucalyptus grandis HOM05D005786 ORTHO05D006946 6.1e-55 218.8 138 76.1
Mapoly0069s0067 Marchantia polymorpha HOM05D005786 ORTHO05D006946 1.5e-53 214.2 282 48.6
SMO203G0033 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 2.0e-53 213.8 295 44.4
vmacro19569 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 4.9e-52 209.1 183 63.4
Haze_04584 Corylus avellana HOM05D005786 ORTHO05D006946 4.5e-50 202.6 128 80.5
QL01p048186 Quercus lobata HOM05D005786 ORTHO05D006946 3.3e-48 196.4 127 77.2
SMO357G0021 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 3.5e-42 176.4 195 49.2
Cpa.g.sc123.39 Carica papaya HOM05D005786 ORTHO05D006946 1.0e-41 174.9 230 47.4
vmacro19570 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 3.9e-41 172.9 104 83.7
Pp3c3_22280 Physcomitrium patens HOM05D005786 ORTHO05D006946 5.0e-41 172.6 291 37.1
AagrBONN_evm.TU.Sc2ySwM_368.936 Anthoceros agrestis HOM05D005786 ORTHO05D006946 8.6e-41 171.8 216 40.3
Haze_04585 Corylus avellana HOM05D005786 ORTHO05D006946 3.3e-40 169.9 164 61.6
ClCG03G010290 Citrullus lanatus HOM05D005786 ORTHO05D006946 1.6e-39 167.5 137 70.8
AagrBONN_evm.TU.Sc2ySwM_117.2462 Anthoceros agrestis HOM05D005786 ORTHO05D006946 3.6e-39 166.4 205 40.0
CSS0025324 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 4.7e-39 166.0 157 63.1
CSS0033529 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 8.0e-39 165.2 157 74.5
Cpa.g.sc123.40 Carica papaya HOM05D005786 ORTHO05D006946 2.0e-37 160.6 104 80.8
FAN02G1732 Fragaria x ananassa HOM05D005786 ORTHO05D006946 2.6e-37 160.2 158 54.4
Medtr3g103380 Medicago truncatula HOM05D005786 ORTHO05D006946 2.9e-28 130.2 89 67.4
AL2G20340 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 1.4e-22 111.3 86 68.6
CBR_g36458 Chara braunii HOM05D005786 ORTHO05D006946 3.1e-22 110.2 197 39.1
Eucgr.H01411 Eucalyptus grandis HOM05D005786 ORTHO05D006946 3.2e-19 100.1 84 69.0
BcaB04g17978 Brassica carinata HOM05D005786 ORTHO05D006946 5.4e-19 99.4 108 51.9
ClCG03G010310 Citrullus lanatus HOM05D005786 ORTHO05D006946 4.6e-18 96.3 130 50.0
MCO14G575 Micromonas commoda HOM05D005786 ORTHO05D006946 4.6e-18 96.3 233 33.0
Oeu040717.1 Olea europaea HOM05D005786 ORTHO05D006946 9.6e-16 88.6 116 52.6
CARHR216470 Cardamine hirsuta HOM05D005786 ORTHO05D006946 1.1e-14 85.1 116 50.0
PRCOL_00005036 Prasinoderma coloniale HOM05D005786 ORTHO05D006946 1.1e-11 75.1 169 29.0
Ah.04g159110 Amaranthus hybridus HOM05D005786 ORTHO05D006946 3.3e-08 63.5 115 40.0
BolC2t08267H Brassica oleracea HOM05D005786 ORTHO05D006946 9.0e-06 55.5 99 41.4


User provided reference genes

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