Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv15598 Davidia involucrata HOM05D008174 ORTHO05D010206 7.8e-143 510.4 245 100.0
Dinv44264 Davidia involucrata HOM05D008174 ORTHO05D010206 1.1e-67 260.8 170 73.5
Nitab4.5_0002222g0010 Nicotiana tabacum HOM05D008174 ORTHO05D010206 8.3e-52 208.0 159 57.9
PGSC0003DMG400041985 Solanum tuberosum HOM05D008174 ORTHO05D010206 7.3e-48 194.9 161 52.2
Hma1.2p1_0013F.1_g008300 Hydrangea macrophylla HOM05D008174 ORTHO05D010206 9.5e-48 194.5 170 55.3
Nitab4.5_0004165g0040 Nicotiana tabacum HOM05D008174 ORTHO05D010206 1.2e-47 194.1 160 52.5
Nitab4.5_0000647g0270 Nicotiana tabacum HOM05D008174 ORTHO05D010206 3.6e-47 192.6 160 52.5
Peaxi162Scf00424g00033 Petunia axillaris HOM05D008174 ORTHO05D010206 2.3e-46 189.9 171 49.7
Solyc06g051770.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.3e-44 184.1 161 49.7
Sopen06g017730 Solanum pennellii HOM05D000014 ORTHO05D010206 2.9e-44 183.0 160 50.6
CAN.G1086.6 Capsicum annuum HOM05D008174 ORTHO05D010206 4.9e-44 182.2 162 48.8
CAN.G112.8 Capsicum annuum HOM05D008174 ORTHO05D010206 4.9e-44 182.2 161 50.9
Nitab4.5_0000777g0110 Nicotiana tabacum HOM05D008174 ORTHO05D010206 6.4e-44 181.8 161 50.9
Actinidia06986 Actinidia chinensis HOM05D000001 ORTHO05D000003 4.6e-42 175.6 231 42.4
Migut.J01515 Erythranthe guttata HOM05D008174 ORTHO05D010206 4.6e-42 175.6 165 45.5
Sopen10g018310 Solanum pennellii HOM05D008174 ORTHO05D010206 4.6e-42 175.6 161 49.7
PGSC0003DMG400021782 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.6e-42 175.6 161 47.8
CAN.G998.16 Capsicum annuum HOM05D008174 ORTHO05D010206 5.9e-42 175.3 161 49.1
Rhsim06G0163600 Rhododendron simsii HOM05D008174 ORTHO05D010206 5.9e-42 175.3 161 50.3
Sopen05g028810 Solanum pennellii HOM05D008174 ORTHO05D010206 5.9e-42 175.3 161 49.1
PGSC0003DMG400039877 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.0e-41 174.5 161 47.8
Solyc05g050640.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 2.3e-41 173.3 161 46.6
Solyc10g047720.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 8.6e-41 171.4 161 47.8
Solyc05g051120.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.9e-40 170.2 161 46.0
Dinv39722 Davidia involucrata HOM05D008174 ORTHO05D010206 3.3e-40 169.5 150 52.7
PGSC0003DMG400007047 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.3e-40 169.5 161 46.6
Sopen05g028850 Solanum pennellii HOM05D008174 ORTHO05D010206 4.3e-40 169.1 161 46.0
CAN.G1363.12 Capsicum annuum HOM05D008174 ORTHO05D010206 9.5e-40 167.9 153 49.0
PGSC0003DMG400007040 Solanum tuberosum HOM05D008174 ORTHO05D010206 9.5e-40 167.9 161 47.2
PGSC0003DMG400038058 Solanum tuberosum HOM05D008174 ORTHO05D010206 6.2e-39 165.2 161 45.3
Solyc05g051080.3 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.1e-38 164.5 166 44.6
CAN.G305.63 Capsicum annuum HOM05D008174 ORTHO05D010206 4.0e-38 162.5 162 45.7
SalBow6G6908 Salvia bowleyana HOM05D008174 ORTHO05D010206 2.4e-35 153.3 131 46.6
SGA_v2.0_scaffold66G22408 Striga asiatica HOM05D008174 ORTHO05D010206 1.2e-34 151.0 167 38.9
PGSC0003DMG400043955 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.0e-34 150.2 139 46.8
PGSC0003DMG400044185 Solanum tuberosum HOM05D008174 ORTHO05D010206 6.0e-34 148.7 161 41.6
Manes.11G074200 Manihot esculenta HOM05D008174 ORTHO05D010206 6.6e-33 145.2 157 43.3
Peaxi162Scf00424g00035 Petunia axillaris HOM05D008174 ORTHO05D010206 2.0e-29 133.7 137 43.8
Ciclev10026971m.g Citrus clementina HOM05D008174 ORTHO05D010206 7.5e-29 131.7 144 45.1
Migut.C00177 Erythranthe guttata HOM05D008174 ORTHO05D010206 9.9e-29 131.3 164 36.6
PGSC0003DMG400047299 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.3e-28 131.0 130 44.6
Solyc05g051160.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 3.2e-27 126.3 125 44.8
Solyc05g051090.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 2.7e-26 123.2 117 44.4
PGSC0003DMG400007005 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.5e-24 117.5 129 41.1
PGSC0003DMG400034441 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.0e-22 109.4 103 46.6
TAR625G0216 Trochodendron aralioides HOM05D008174 ORTHO05D010206 6.8e-22 108.6 161 33.5
Ah.08g216590 Amaranthus hybridus HOM05D008174 ORTHO05D010206 1.5e-21 107.5 157 36.9
SGA_v2.0_scaffold48G18023 Striga asiatica HOM05D008174 ORTHO05D010206 9.9e-21 104.8 162 33.3
PGSC0003DMG400043206 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.9e-20 102.4 113 39.8
PGSC0003DMG400038972 Solanum tuberosum HOM05D018142 ORTHO05D010206 1.4e-19 100.9 132 40.2
PGSC0003DMG400007003 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.2e-19 99.8 113 39.8
CSS0024620 Camellia sinensis var. sinensis HOM05D008174 ORTHO05D010206 2.1e-18 97.1 86 53.5
Solyc05g050660.1 Solanum lycopersicum HOM05D018142 ORTHO05D010206 2.1e-18 97.1 149 37.6
Sc06g0009580 Simmondsia chinensis HOM05D002024 ORTHO05D007288 8.7e-17 91.7 131 40.5
PGSC0003DMG400039569 Solanum tuberosum HOM05D008174 ORTHO05D010206 8.7e-17 91.7 184 29.9
Peaxi162Scf00095g00111 Petunia axillaris HOM05D008174 ORTHO05D010206 1.1e-16 91.3 80 50.0
Sopen05g029070 Solanum pennellii HOM05D018142 ORTHO05D010206 1.5e-16 90.9 149 36.9
PGSC0003DMG400042098 Solanum tuberosum HOM05D018142 ORTHO05D010206 3.3e-16 89.7 161 29.8
Sopen05g029530 Solanum pennellii HOM05D008174 ORTHO05D010206 4.3e-16 89.4 196 28.6
PGSC0003DMG400041587 Solanum tuberosum HOM05D018142 ORTHO05D010206 2.1e-15 87.0 161 29.8
FAN10G2415 Fragaria x ananassa HOM05D008174 ORTHO05D010206 4.7e-15 85.9 155 35.5
Peaxi162Scf00164g00103 Petunia axillaris HOM05D008174 ORTHO05D010206 8.1e-15 85.1 70 47.1
PGSC0003DMG400045106 Solanum tuberosum HOM05D018142 ORTHO05D010206 8.1e-15 85.1 150 30.0
Actinidia24475 Actinidia chinensis HOM05D008174 ORTHO05D010206 4.0e-14 82.8 127 37.0
Sopen05g028860 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-13 81.3 177 29.9
PGSC0003DMG400038868 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.4e-13 79.3 87 43.7
Dinv07397 Davidia involucrata HOM05D000098 ORTHO05D008846 5.8e-13 79.0 61 65.6
Solyc03g044540.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 3.8e-12 76.3 110 38.2
Actinidia09720 Actinidia chinensis HOM05D008174 ORTHO05D010206 4.6e-10 69.3 67 46.3
FAN06G2767 Fragaria x ananassa HOM05D008174 ORTHO05D010206 1.7e-09 67.4 155 25.8
Oeu044419.1 Olea europaea HOM05D000098 ORTHO05D008846 2.3e-09 67.0 64 54.7
Rhsim02G0103400 Rhododendron simsii HOM05D000098 ORTHO05D008846 6.6e-09 65.5 63 50.8
Oeu002759.1 Olea europaea HOM05D000098 ORTHO05D008846 1.5e-08 64.3 66 51.5
CSS0000118 Camellia sinensis var. sinensis HOM05D000098 ORTHO05D008846 1.3e-07 61.2 63 46.0
Nn4g25547 Nelumbo nucifera HOM05D001713 ORTHO05D001669 1.3e-07 61.2 170 25.9
Rhsim13G0146700 Rhododendron simsii HOM05D000098 ORTHO05D008846 1.3e-07 61.2 63 47.6
Cfa000111 Carpinus fangiana HOM05D000098 ORTHO05D008846 1.6e-07 60.8 66 43.9
RhsimUnG0028200 Rhododendron simsii HOM05D000098 ORTHO05D008846 1.6e-07 60.8 66 43.9
RhsimUnG0227900 Rhododendron simsii HOM05D000098 ORTHO05D008846 1.6e-07 60.8 66 43.9
PSO210G6916 Papaver somniferum HOM05D001713 ORTHO05D001669 2.1e-07 60.5 163 26.4
Sc17g0007700 Simmondsia chinensis HOM05D000098 ORTHO05D008846 2.8e-07 60.1 63 44.4
Hma1.2p1_0298F.1_g117190 Hydrangea macrophylla HOM05D000098 ORTHO05D008846 3.6e-07 59.7 63 44.4
Solyc11g012130.2 Solanum lycopersicum HOM05D000098 ORTHO05D008846 3.6e-07 59.7 65 44.6
Sopen11g006920 Solanum pennellii HOM05D000098 ORTHO05D008846 3.6e-07 59.7 65 44.6
Atru.chr1.2462 Acer truncatum HOM05D000098 ORTHO05D008846 4.8e-07 59.3 66 42.4
CSS0013771 Camellia sinensis var. sinensis HOM05D000098 ORTHO05D008846 4.8e-07 59.3 61 47.5
Nn1g03332 Nelumbo nucifera HOM05D000098 ORTHO05D008846 4.8e-07 59.3 73 41.1
Actinidia26863 Actinidia chinensis HOM05D000098 ORTHO05D008846 6.2e-07 58.9 38 63.2
Actinidia39268 Actinidia chinensis HOM05D000098 ORTHO05D008846 8.1e-07 58.5 63 44.4
Cpa.g.sc2016.1 Carica papaya HOM05D000098 ORTHO05D008846 8.1e-07 58.5 65 43.1
Nn1g07353 Nelumbo nucifera HOM05D000098 ORTHO05D008846 8.1e-07 58.5 65 46.2
Oeu003177.1 Olea europaea HOM05D000098 ORTHO05D008846 8.1e-07 58.5 65 43.1
PSO761G0588 Papaver somniferum HOM05D004833 ORTHO05D005671 8.1e-07 58.5 156 25.0
Thecc.06G232600 Theobroma cacao HOM05D000098 ORTHO05D008846 8.1e-07 58.5 63 41.3
CAN.G1186.24 Capsicum annuum HOM05D000098 ORTHO05D008846 1.1e-06 58.2 38 65.8
Haze_09172 Corylus avellana HOM05D001713 ORTHO05D001669 1.4e-06 57.8 118 29.7
RhsimUnG0109000 Rhododendron simsii HOM05D000098 ORTHO05D008846 1.4e-06 57.8 36 69.4
Cfa011927 Carpinus fangiana HOM05D001713 ORTHO05D001669 1.8e-06 57.4 118 29.7
Duzib235G1418 Durio zibethinus HOM05D000098 ORTHO05D008846 1.8e-06 57.4 63 42.9
Nitab4.5_0000143g0360 Nicotiana tabacum HOM05D000098 ORTHO05D008846 1.8e-06 57.4 38 65.8
Nitab4.5_0001198g0110 Nicotiana tabacum HOM05D000098 ORTHO05D008846 1.8e-06 57.4 38 65.8
Haze_06913 Corylus avellana HOM05D000098 ORTHO05D008846 2.4e-06 57.0 38 63.2
Nitab4.5_0002222g0090 Nicotiana tabacum HOM05D008174 ORTHO05D010206 2.4e-06 57.0 82 30.5
CiPaw.10G077500 Carya illinoinensis HOM05D000098 ORTHO05D008846 3.1e-06 56.6 61 49.2
Sed0020798 Sechium edule HOM05D000098 ORTHO05D008846 3.1e-06 56.6 65 44.6
Duzib160G0122 Durio zibethinus HOM05D000098 ORTHO05D008846 4.0e-06 56.2 63 39.7
Peaxi162Scf00558g00413 Petunia axillaris HOM05D000098 ORTHO05D008846 4.0e-06 56.2 40 60.0
TAR629G0726 Trochodendron aralioides HOM05D000098 ORTHO05D008846 5.3e-06 55.8 64 42.2
EL10Ac8g20175 Beta vulgaris HOM05D000098 ORTHO05D008846 9.0e-06 55.1 68 47.1
CiPaw.09G101900 Carya illinoinensis HOM05D000098 ORTHO05D008846 9.0e-06 55.1 78 41.0
Dinv13964 Davidia involucrata HOM05D000098 ORTHO05D008846 9.0e-06 55.1 36 63.9
Medtr2g025580 Medicago truncatula HOM05D000098 ORTHO05D008846 9.0e-06 55.1 61 49.2


User provided reference genes

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