Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv15494 Davidia involucrata HOM05D007281 ORTHO05D009241 3.0e-158 562.4 285 100.0
Hma1.2p1_0565F.1_g179540 Hydrangea macrophylla HOM05D007281 ORTHO05D009241 9.5e-96 354.8 285 67.7
CSS0001951 Camellia sinensis var. sinensis HOM05D007281 ORTHO05D009241 2.1e-87 327.0 279 64.2
CSS0030135 Camellia sinensis var. sinensis HOM05D007281 ORTHO05D009241 2.1e-87 327.0 279 64.2
Actinidia30489 Actinidia chinensis HOM05D007281 ORTHO05D009241 3.5e-82 309.7 286 59.8
Rhsim04G0063100 Rhododendron simsii HOM05D007281 ORTHO05D009241 1.9e-75 287.3 289 56.7
GSVIVG01020865001 Vitis vinifera HOM05D007281 ORTHO05D009241 3.2e-67 260.0 235 59.6
Cfa014545 Carpinus fangiana HOM05D007281 ORTHO05D009241 2.7e-66 256.9 207 66.2
Lj1P735T42 Lonicera japonica HOM05D007281 ORTHO05D009241 5.7e-64 249.2 193 66.3
TAR636G0075 Trochodendron aralioides HOM05D007281 ORTHO05D009241 2.1e-63 247.3 208 58.7
Haze_13088 Corylus avellana HOM05D007281 ORTHO05D009241 1.1e-62 245.0 205 63.9
TAR633G2446 Trochodendron aralioides HOM05D007281 ORTHO05D009241 1.1e-62 245.0 208 60.1
CiPaw.03G169800 Carya illinoinensis HOM05D007281 ORTHO05D009241 7.6e-61 238.8 214 60.3
DCAR_012978 Daucus carota HOM05D007281 ORTHO05D009241 1.3e-60 238.0 181 65.2
Thecc.02G171700 Theobroma cacao HOM05D007281 ORTHO05D009241 4.2e-59 233.0 212 57.1
QL03p011182 Quercus lobata HOM05D007281 ORTHO05D009241 7.1e-59 232.3 227 56.4
Atru.chr6.3074 Acer truncatum HOM05D007281 ORTHO05D009241 1.6e-58 231.1 285 49.5
Sabra09G0050300 Salix brachista HOM05D007281 ORTHO05D009241 6.1e-58 229.2 230 52.6
Nitab4.5_0002370g0080 Nicotiana tabacum HOM05D007281 ORTHO05D009241 2.8e-55 220.3 209 56.0
Nitab4.5_0001871g0100 Nicotiana tabacum HOM05D007281 ORTHO05D009241 1.4e-54 218.0 290 47.6
TWI36G0005 Tripterygium wilfordii HOM05D007281 ORTHO05D009241 2.4e-54 217.2 274 48.2
Manes.01G177300 Manihot esculenta HOM05D007281 ORTHO05D009241 6.9e-54 215.7 210 55.2
Peaxi162Scf00007g02726 Petunia axillaris HOM05D007281 ORTHO05D009241 8.5e-52 208.8 210 55.7
Sabra16G0168300 Salix brachista HOM05D007281 ORTHO05D009241 8.5e-52 208.8 203 55.2
Sc06g0009160 Simmondsia chinensis HOM05D007281 ORTHO05D009241 2.1e-50 204.1 226 50.4
vmacro09292 Vaccinium macrocarpon HOM05D007281 ORTHO05D009241 1.8e-49 201.1 221 54.3
Cpa.g.sc116.70 Carica papaya HOM05D007281 ORTHO05D009241 2.3e-49 200.7 203 53.7
Nn8g41289 Nelumbo nucifera HOM05D007281 ORTHO05D009241 3.0e-49 200.3 186 55.4
AUR62041771 Chenopodium quinoa HOM05D007281 ORTHO05D009241 5.1e-49 199.5 197 51.8
Cc05_g06270 Coffea canephora HOM05D007281 ORTHO05D009241 8.8e-49 198.7 215 49.8
Solyc07g054680.3 Solanum lycopersicum HOM05D007281 ORTHO05D009241 8.8e-49 198.7 236 49.6
EL10As1g23104 Beta vulgaris HOM05D007281 ORTHO05D009241 4.3e-48 196.4 197 52.3
PSO384G2432 Papaver somniferum HOM05D007281 ORTHO05D009241 7.4e-48 195.7 189 54.0
Gohir.A04G105900 Gossypium hirsutum HOM05D007281 ORTHO05D009241 1.8e-46 191.0 181 53.0
Potri.001G273100 Populus trichocarpa HOM05D007281 ORTHO05D009241 1.8e-46 191.0 186 55.9
Ah.12g062420 Amaranthus hybridus HOM05D007281 ORTHO05D009241 5.3e-46 189.5 232 45.3
Gorai.012G131800 Gossypium raimondii HOM05D007281 ORTHO05D009241 2.0e-45 187.6 248 44.8
ClCG01G013900 Citrullus lanatus HOM05D007281 ORTHO05D009241 2.6e-45 187.2 213 48.8
Potri.009G067400 Populus trichocarpa HOM05D007281 ORTHO05D009241 3.4e-45 186.8 161 57.8
Gohir.D04G145700 Gossypium hirsutum HOM05D007281 ORTHO05D009241 1.0e-44 185.3 248 44.0
CANSAT64G1356 Cannabis sativa HOM05D007281 ORTHO05D009241 1.3e-44 184.9 233 46.4
Hund01235 Selenicereus undatus HOM05D007281 ORTHO05D009241 1.3e-44 184.9 190 50.0
Hund01238 Selenicereus undatus HOM05D007281 ORTHO05D009241 1.3e-44 184.9 190 50.0
CAN.G508.23 Capsicum annuum HOM05D007281 ORTHO05D009241 1.7e-44 184.5 209 50.7
Duzib052G0115 Durio zibethinus HOM05D007281 ORTHO05D009241 5.0e-44 183.0 199 52.3
MBI03_g06061_MAGBIO Magnolia biondii HOM05D007281 ORTHO05D009241 5.0e-44 183.0 180 51.1
ECA234G1359 Erigeron canadensis HOM05D007281 ORTHO05D009241 2.5e-43 180.6 197 48.7
PGSC0003DMG400018370 Solanum tuberosum HOM05D007281 ORTHO05D009241 3.2e-43 180.3 231 48.9
Glyma.13G301000 Glycine max HOM05D007281 ORTHO05D009241 4.7e-42 176.4 182 48.4
Sed0007470 Sechium edule HOM05D007281 ORTHO05D009241 1.5e-40 171.4 215 47.9
Aqoxy1G00179 Aquilegia oxysepala HOM05D007281 ORTHO05D009241 2.6e-40 170.6 208 42.8
MSTRG.13304 Avicennia marina HOM05D007281 ORTHO05D009241 2.8e-39 167.2 192 49.0
PGR042G3246 Punica granatum HOM05D007281 ORTHO05D009241 3.1e-38 163.7 206 47.1
HanXRQChr15g0488101 Helianthus annuus HOM05D007281 ORTHO05D009241 7.0e-38 162.5 288 37.5
SalBow7G4701 Salvia bowleyana HOM05D007281 ORTHO05D009241 1.2e-37 161.8 190 45.8
SGA_v2.0_scaffold70G23463 Striga asiatica HOM05D007281 ORTHO05D009241 1.2e-37 161.8 172 49.4
CsaV3_1G014130 Cucumis sativus L. HOM05D007281 ORTHO05D009241 4.5e-37 159.8 213 43.2
Lj3g0021775 Lotus japonicus HOM05D007281 ORTHO05D009241 1.5e-35 154.8 181 47.0
Ciclev10016159m.g Citrus clementina HOM05D007281 ORTHO05D009241 1.9e-35 154.5 133 59.4
arahy.Tifrunner.gnm1.ann1.HBB9ZN Arachis hypogaea HOM05D001233 ORTHO05D009241 7.2e-35 152.5 213 41.3
Ca_01535_v3 Cicer arietinum L. HOM05D007281 ORTHO05D009241 1.2e-34 151.8 182 45.1
Lsat_1_v5_gn_4_69540 Lactuca sativa HOM05D007281 ORTHO05D009241 1.6e-34 151.4 176 43.8
arahy.Tifrunner.gnm1.ann1.JM9TK1 Arachis hypogaea HOM05D007281 ORTHO05D009241 6.1e-34 149.4 228 40.4
PSO339G5345 Papaver somniferum HOM05D007281 ORTHO05D009241 1.8e-33 147.9 164 48.8
Lalb_Chr14g0366621 Lupinus albus HOM05D007281 ORTHO05D009241 5.2e-33 146.4 186 45.2
VMungo1080G1478 Vigna mungo HOM05D007281 ORTHO05D009241 4.8e-31 139.8 187 42.2
AL1G23070 Arabidopsis lyrata HOM05D007281 ORTHO05D009241 1.4e-30 138.3 188 43.1
Thhalv10007999m.g Eutrema salsugineum HOM05D007281 ORTHO05D009241 1.4e-30 138.3 184 43.5
Medtr2g090030 Medicago truncatula HOM05D007281 ORTHO05D009241 1.4e-30 138.3 222 37.8
Medtr2g007050 Medicago truncatula HOM05D007281 ORTHO05D009241 2.4e-30 137.5 222 37.8
Psat5g268080 Pisum sativum HOM05D007281 ORTHO05D009241 3.1e-30 137.1 184 44.0
Carub.0001s1156 Capsella rubella HOM05D007281 ORTHO05D009241 3.5e-29 133.7 181 43.1
Phvul.005G107600 Phaseolus vulgaris HOM05D007281 ORTHO05D009241 1.7e-28 131.3 188 42.6
C05p11270 Brassica napus HOM05D007281 ORTHO05D009241 2.9e-28 130.6 150 48.7
BolC5t29876H Brassica oleracea HOM05D007281 ORTHO05D009241 2.9e-28 130.6 150 48.7
TPR.G27076 Trifolium pratense HOM05D007281 ORTHO05D009241 2.9e-28 130.6 183 39.9
A06p09560 Brassica napus HOM05D007281 ORTHO05D009241 6.5e-28 129.4 150 47.3
Migut.M00334 Erythranthe guttata HOM05D007281 ORTHO05D009241 6.5e-28 129.4 160 46.2
BraA06t24146Z Brassica rapa HOM05D007281 ORTHO05D009241 8.5e-28 129.0 150 48.0
BcaC05g25243 Brassica carinata HOM05D007281 ORTHO05D009241 1.9e-27 127.9 160 46.9
Sp1g10520 Schrenkiella parvula HOM05D007281 ORTHO05D009241 3.2e-27 127.1 150 48.0
arahy.Tifrunner.gnm1.ann1.F4A8JX Arachis hypogaea HOM05D007281 ORTHO05D009241 1.2e-26 125.2 138 48.6
THA.LOC104809493 Tarenaya hassleriana HOM05D007281 ORTHO05D009241 1.2e-26 125.2 145 49.0
HPP92_019763 Vanilla planifolia HOM05D007281 ORTHO05D009241 1.8e-25 121.3 173 41.6
MD17G1084400 Malus domestica HOM05D007281 ORTHO05D009241 4.0e-25 120.2 227 36.6
Aa31LG1G2830 Aethionema arabicum HOM05D007281 ORTHO05D009241 5.2e-25 119.8 172 41.9
CARHR012220 Cardamine hirsuta HOM05D007281 ORTHO05D009241 1.2e-24 118.6 169 43.8
Eucgr.A01777 Eucalyptus grandis HOM05D007281 ORTHO05D009241 2.6e-24 117.5 98 60.2
ATR1127G094 Amborella trichopoda HOM05D007281 ORTHO05D009241 1.7e-23 114.8 158 43.0
AT1G11900 Arabidopsis thaliana HOM05D007281 ORTHO05D009241 7.0e-22 109.4 167 39.5
Prupe.3G231200 Prunus persica HOM05D007281 ORTHO05D009241 9.1e-22 109.0 176 39.8
Sopen07g028580 Solanum pennellii HOM05D007281 ORTHO05D009241 1.9e-19 101.3 125 47.2
FvH4_6g24020 Fragaria vesca HOM05D007281 ORTHO05D009241 3.2e-19 100.5 162 41.4
FAN14G1737 Fragaria x ananassa HOM05D007281 ORTHO05D009241 3.2e-19 100.5 162 41.4
RcHm_v2.0_Chr1g0342741 Rosa chinensis HOM05D007281 ORTHO05D009241 7.2e-19 99.4 181 37.6
FAN14G4544 Fragaria x ananassa HOM05D007281 ORTHO05D009241 6.1e-18 96.3 162 40.1
FvH4_6g44590 Fragaria vesca HOM05D007281 ORTHO05D009241 1.4e-17 95.1 162 39.5
FAN02G4278 Fragaria x ananassa HOM05D007281 ORTHO05D009241 1.8e-17 94.7 161 39.8
Os05g0481800 Oryza sativa ssp. japonica HOM05D007281 ORTHO05D009241 9.8e-16 89.0 156 33.3
Nn2g14540 Nelumbo nucifera HOM05D007281 ORTHO05D009241 1.1e-14 85.5 74 54.1
Nn1g08105 Nelumbo nucifera HOM05D007281 ORTHO05D009241 3.5e-13 80.5 66 56.1
Zm00001eb290940 Zea mays HOM05D007281 ORTHO05D009241 5.9e-13 79.7 104 38.5
Glyma.12G201200 Glycine max HOM05D007281 ORTHO05D009241 1.2e-08 65.5 63 50.8
MD14G1065400 Malus domestica HOM05D007281 ORTHO05D009241 7.5e-08 62.8 50 64.0


User provided reference genes

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