Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv15467 Davidia involucrata HOM05D019788 ORTHO05D003357 3.3e-155 551.6 265 100.0
Dinv12675 Davidia involucrata HOM05D019788 ORTHO05D003357 8.6e-95 350.9 248 73.8
Dinv01557 Davidia involucrata HOM05D019788 ORTHO05D003357 5.8e-67 258.5 346 45.1
Dinv13154 Davidia involucrata HOM05D019788 ORTHO05D003357 8.4e-58 228.0 165 70.3
Dinv09271 Davidia involucrata HOM05D019788 ORTHO05D003357 6.0e-56 221.9 260 55.8
Dinv31489 Davidia involucrata HOM05D008854 ORTHO05D003357 6.2e-29 132.1 82 76.8
Dinv24491 Davidia involucrata HOM05D019788 ORTHO05D003357 4.3e-14 82.8 110 49.1
Rhsim02G0102200 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.4e-12 77.8 126 35.7
Rhsim04G0114900 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.5e-11 74.3 126 34.9
Rhsim04G0115100 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.5e-11 74.3 126 34.9
Rhsim02G0142300 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.6e-11 73.6 126 34.1
FvH4_2g06392 Fragaria vesca HOM05D018569 ORTHO05D011574 5.9e-11 72.4 153 31.4
FvH4_7g08581 Fragaria vesca HOM05D018569 ORTHO05D011574 7.7e-11 72.0 153 31.4
Thecc.02G099900 Theobroma cacao HOM05D045304 ORTHO05D003357 1.9e-09 67.4 157 30.6
SGA_v2.0_scaffold251G45069 Striga asiatica HOM05D005194 ORTHO05D003357 2.5e-09 67.0 161 31.1
SGA_v2.0_scaffold81G26004 Striga asiatica HOM05D005194 ORTHO05D003357 2.5e-09 67.0 161 31.1
FvH4_4g28751 Fragaria vesca HOM05D000045 ORTHO05D003357 7.2e-09 65.5 129 29.5
RcHm_v2.0_Chr7g0189611 Rosa chinensis HOM05D029995 ORTHO05D011574 7.2e-09 65.5 123 33.3
CANSAT21G0088 Cannabis sativa HOM05D000045 ORTHO05D003357 9.4e-09 65.1 117 33.3
RcHm_v2.0_Chr6g0268121 Rosa chinensis HOM05D029995 ORTHO05D003357 1.2e-08 64.7 123 33.3
Nn2g15037 Nelumbo nucifera HOM05D000045 ORTHO05D000067 2.7e-08 63.5 109 34.9
FAN03G2544 Fragaria x ananassa HOM05D016452 ORTHO05D003357 3.6e-08 63.2 163 27.0
Rhsim01G0208000 Rhododendron simsii HOM05D000045 ORTHO05D000067 3.6e-08 63.2 124 33.1
FvH4_7g03535 Fragaria vesca HOM05D000045 ORTHO05D003357 4.7e-08 62.8 117 31.6
Atru.chr4.254 Acer truncatum HOM05D000045 ORTHO05D003357 6.1e-08 62.4 115 33.0
Atru.chr12.1212 Acer truncatum HOM05D000045 ORTHO05D000067 7.9e-08 62.0 115 28.7
CANSAT35G0973 Cannabis sativa HOM05D000045 ORTHO05D000067 1.4e-07 61.2 117 31.6
FvH4_5g16041 Fragaria vesca HOM05D000045 ORTHO05D003357 2.3e-07 60.5 118 30.5
CANSAT11G1175 Cannabis sativa HOM05D000045 ORTHO05D000067 3.0e-07 60.1 117 31.6
FvH4_3g26554 Fragaria vesca HOM05D000045 ORTHO05D012261 3.0e-07 60.1 102 32.4
Rhsim04G0145900 Rhododendron simsii HOM05D000045 ORTHO05D003665 3.9e-07 59.7 131 31.3
FvH4_4g10123 Fragaria vesca HOM05D016452 ORTHO05D003357 5.1e-07 59.3 88 36.4
RcHm_v2.0_Chr6g0246161 Rosa chinensis HOM05D000045 ORTHO05D011574 6.7e-07 58.9 115 30.4
CANSAT21G2605 Cannabis sativa HOM05D000045 ORTHO05D003357 8.8e-07 58.5 108 31.5
Rhsim05G0138000 Rhododendron simsii HOM05D000045 ORTHO05D000067 8.8e-07 58.5 131 30.5
Rhsim04G0060700 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.1e-06 58.2 136 30.9
RcHm_v2.0_Chr4g0434601 Rosa chinensis HOM05D005194 ORTHO05D003357 3.3e-06 56.6 112 30.4
CANSAT11G0345 Cannabis sativa HOM05D000045 ORTHO05D000067 4.4e-06 56.2 117 29.9
RhsimUnG0161100 Rhododendron simsii HOM05D000045 ORTHO05D000067 4.4e-06 56.2 167 26.3
RhsimUnG0178400 Rhododendron simsii HOM05D000045 ORTHO05D000067 4.4e-06 56.2 159 26.4
Dinv02678 Davidia involucrata HOM05D016602 ORTHO05D016986 5.7e-06 55.8 104 31.7


User provided reference genes

Program Settings