Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv15203 Davidia involucrata HOM05D003570 ORTHO05D004207 4.2e-130 468.0 234 100.0
Hma1.2p1_1533F.1_g289360 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 4.7e-97 358.2 235 74.5
Actinidia37450 Actinidia chinensis HOM05D003570 ORTHO05D004207 3.4e-95 352.1 234 73.5
Lj6A815G40 Lonicera japonica HOM05D003570 ORTHO05D004207 1.9e-93 346.3 229 72.9
Lj3A151T25 Lonicera japonica HOM05D003570 ORTHO05D004207 5.4e-93 344.7 236 70.8
Nitab4.5_0002373g0110 Nicotiana tabacum HOM05D003570 ORTHO05D004207 2.1e-89 332.8 237 69.2
Nitab4.5_0004117g0010 Nicotiana tabacum HOM05D003570 ORTHO05D004207 4.7e-89 331.6 232 70.3
Sopen05g008710 Solanum pennellii HOM05D003570 ORTHO05D004207 1.1e-88 330.5 238 68.9
PGSC0003DMG400016968 Solanum tuberosum HOM05D003570 ORTHO05D004207 2.0e-87 326.2 238 68.1
Peaxi162Scf00128g00550 Petunia axillaris HOM05D003570 ORTHO05D004207 7.6e-87 324.3 238 66.8
Nitab4.5_0001978g0070 Nicotiana tabacum HOM05D003570 ORTHO05D004207 5.4e-85 318.2 240 66.2
TAR622G0746 Trochodendron aralioides HOM05D003570 ORTHO05D004207 7.1e-85 317.8 239 68.6
CAN.G1572.8 Capsicum annuum HOM05D003570 ORTHO05D004207 1.6e-84 316.6 230 67.4
Thecc.02G265200 Theobroma cacao HOM05D003570 ORTHO05D004207 1.3e-83 313.5 232 68.1
Haze_12279 Corylus avellana HOM05D003570 ORTHO05D004207 5.6e-82 308.1 232 65.9
Duzib248G0757 Durio zibethinus HOM05D003570 ORTHO05D004207 1.3e-81 307.0 232 66.4
COL.COLO4_23499 Corchorus olitorius HOM05D003570 ORTHO05D004207 1.6e-81 306.6 227 67.4
Rhsim12G0108000 Rhododendron simsii HOM05D003570 ORTHO05D004207 4.0e-80 302.0 235 65.5
Lsat_1_v5_gn_0_32260 Lactuca sativa HOM05D003570 ORTHO05D004207 3.4e-79 298.9 223 63.7
HanXRQChr08g0208421 Helianthus annuus HOM05D003570 ORTHO05D004207 5.8e-79 298.1 229 62.4
Nn4g22548 Nelumbo nucifera HOM05D003570 ORTHO05D004207 2.9e-78 295.8 239 62.3
Gohir.D04G180400 Gossypium hirsutum HOM05D003570 ORTHO05D004207 3.8e-78 295.4 233 63.1
Gorai.012G173500 Gossypium raimondii HOM05D003570 ORTHO05D004207 3.8e-78 295.4 233 63.1
Prupe.1G241900 Prunus persica HOM05D003570 ORTHO05D004207 8.4e-78 294.3 220 67.3
Oeu038645.2 Olea europaea HOM05D003570 ORTHO05D004207 1.4e-77 293.5 221 67.9
ECA233G5166 Erigeron canadensis HOM05D002671 ORTHO05D002985 1.9e-77 293.1 231 60.6
CiPaw.06G064800 Carya illinoinensis HOM05D003570 ORTHO05D004207 2.4e-77 292.7 233 64.4
Potri.008G183500 Populus trichocarpa HOM05D003570 ORTHO05D004207 9.3e-77 290.8 225 64.4
PSO063G4933 Papaver somniferum HOM05D003570 ORTHO05D004207 1.6e-76 290.0 225 65.3
Manes.13G020900 Manihot esculenta HOM05D003570 ORTHO05D004207 2.7e-76 289.3 225 64.0
GSVIVG01000572001 Vitis vinifera HOM05D003570 ORTHO05D004207 2.7e-76 289.3 220 63.2
PGR102G1250 Punica granatum HOM05D003570 ORTHO05D004207 3.5e-76 288.9 233 60.1
Gohir.A04G137200 Gossypium hirsutum HOM05D003570 ORTHO05D004207 4.6e-76 288.5 235 62.1
Sc04g0009680 Simmondsia chinensis HOM05D003570 ORTHO05D004207 6.0e-76 288.1 237 57.8
AUR62024231 Chenopodium quinoa HOM05D003570 ORTHO05D004207 1.3e-75 287.0 238 62.2
Ciclev10030923m.g Citrus clementina HOM05D003570 ORTHO05D004207 3.9e-75 285.4 229 63.3
PSO339G2835 Papaver somniferum HOM05D003570 ORTHO05D004207 6.7e-75 284.6 225 64.0
vmacro17618 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 2.5e-74 282.7 219 65.8
AUR62005511 Chenopodium quinoa HOM05D003570 ORTHO05D004207 3.3e-74 282.3 238 61.8
PSO754G0035 Papaver somniferum HOM05D003570 ORTHO05D004207 9.6e-74 280.8 236 61.0
PSO063G1535 Papaver somniferum HOM05D003570 ORTHO05D004207 1.6e-73 280.0 225 63.6
vmacro16171 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 2.8e-73 279.3 233 62.2
Oeu038646.1 Olea europaea HOM05D003570 ORTHO05D004207 4.8e-73 278.5 221 65.6
vmacro16173 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 6.2e-73 278.1 257 58.0
MSTRG.553 Avicennia marina HOM05D003570 ORTHO05D004207 5.3e-72 275.0 220 62.3
DCAR_026498 Daucus carota HOM05D003570 ORTHO05D004207 5.3e-72 275.0 207 64.3
Eucgr.B03244 Eucalyptus grandis HOM05D003570 ORTHO05D004207 2.0e-71 273.1 232 58.2
Sabra08G0139700 Salix brachista HOM05D003570 ORTHO05D004207 2.0e-71 273.1 207 66.2
EL10As2g23162 Beta vulgaris HOM05D003570 ORTHO05D004207 2.6e-71 272.7 219 61.2
MD13G1104500 Malus domestica HOM05D003570 ORTHO05D004207 2.6e-71 272.7 221 62.4
QL03p056574 Quercus lobata HOM05D003570 ORTHO05D004207 4.5e-71 271.9 232 60.3
arahy.Tifrunner.gnm1.ann1.I1BHDP Arachis hypogaea HOM05D003570 ORTHO05D004207 9.9e-71 270.8 212 62.7
SGA_v2.0_scaffold22G09799 Striga asiatica HOM05D003570 ORTHO05D004207 9.9e-71 270.8 220 60.9
arahy.Tifrunner.gnm1.ann1.8897EQ Arachis hypogaea HOM05D003570 ORTHO05D004207 1.3e-70 270.4 212 62.7
Cc11_g16040 Coffea canephora HOM05D003570 ORTHO05D004207 1.9e-69 266.5 220 59.5
Migut.K00625 Erythranthe guttata HOM05D003570 ORTHO05D004207 1.9e-69 266.5 218 62.8
CANSAT11G1164 Cannabis sativa HOM05D003570 ORTHO05D004207 1.2e-68 263.8 229 59.4
Phvul.001G256000 Phaseolus vulgaris HOM05D003570 ORTHO05D004207 1.6e-68 263.5 216 61.1
ClCG05G026050 Citrullus lanatus HOM05D003570 ORTHO05D004207 2.7e-68 262.7 234 56.4
Lalb_Chr08g0230861 Lupinus albus HOM05D003570 ORTHO05D004207 2.7e-68 262.7 213 61.0
CsaV3_5G030790 Cucumis sativus L. HOM05D003570 ORTHO05D004207 1.0e-67 260.8 227 55.9
Sed0006332 Sechium edule HOM05D003570 ORTHO05D004207 3.0e-67 259.2 224 57.1
Cpa.g.sc13.88 Carica papaya HOM05D003570 ORTHO05D004207 5.1e-67 258.5 221 61.1
VMungo1383G2895 Vigna mungo HOM05D003570 ORTHO05D004207 5.1e-67 258.5 213 61.5
QL03p056953 Quercus lobata HOM05D003570 ORTHO05D004207 1.5e-66 256.9 224 60.3
MELO3C011924.2 Cucumis melo HOM05D003570 ORTHO05D004207 2.5e-66 256.1 227 54.6
Aqoxy5G03688 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 5.6e-66 255.0 231 56.3
Aqoxy7G03799 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 5.6e-66 255.0 231 56.3
Glyma.11G244100 Glycine max HOM05D003570 ORTHO05D004207 7.4e-66 254.6 220 57.7
THA.LOC104805269 Tarenaya hassleriana HOM05D003570 ORTHO05D004207 9.6e-66 254.2 226 53.5
MBI04_g13681_MAGBIO Magnolia biondii HOM05D003570 ORTHO05D004207 1.3e-65 253.8 216 58.8
Ca_25131_v3 Cicer arietinum L. HOM05D001269 ORTHO05D001083 1.6e-65 253.4 217 56.2
COL.COLO4_27904 Corchorus olitorius HOM05D003570 ORTHO05D004207 2.1e-65 253.1 213 62.0
Psat5g092360 Pisum sativum HOM05D003570 ORTHO05D004207 1.8e-64 250.0 217 55.3
Lj4g0018208 Lotus japonicus HOM05D003570 ORTHO05D004207 1.2e-63 247.3 211 61.1
RcHm_v2.0_Chr4g0432651 Rosa chinensis HOM05D003570 ORTHO05D004207 2.0e-63 246.5 216 59.7
TWI36G1196 Tripterygium wilfordii HOM05D003570 ORTHO05D004207 3.4e-63 245.7 217 58.5
Medtr3g086460 Medicago truncatula HOM05D003570 ORTHO05D004207 4.5e-63 245.4 217 55.3
Lj6g0027950 Lotus japonicus HOM05D003570 ORTHO05D004207 1.3e-62 243.8 211 59.7
ATR0824G009 Amborella trichopoda HOM05D003570 ORTHO05D004207 2.2e-62 243.0 210 56.7
FAN07G1326 Fragaria x ananassa HOM05D003570 ORTHO05D004207 2.2e-62 243.0 216 58.8
FAN17G0862 Fragaria x ananassa HOM05D003570 ORTHO05D004207 8.4e-62 241.1 216 57.9
FAN22G0389 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.1e-61 240.7 216 57.9
FAN12G2286 Fragaria x ananassa HOM05D003570 ORTHO05D004207 9.3e-61 237.7 213 58.2
TPR.G35967 Trifolium pratense HOM05D003570 ORTHO05D004207 9.3e-61 237.7 216 52.8
PSO063G3251 Papaver somniferum HOM05D003570 ORTHO05D004207 1.6e-60 236.9 232 54.3
FvH4_4g25360 Fragaria vesca HOM05D003570 ORTHO05D004207 7.9e-60 234.6 213 57.7
CSS0045431 Camellia sinensis var. sinensis HOM05D003570 ORTHO05D004207 2.1e-57 226.5 143 78.3
SEGI_05718 Sequoiadendron giganteum HOM05D003570 ORTHO05D004207 6.9e-56 221.5 209 53.1
Aqoxy1G03220 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 4.5e-55 218.8 214 53.7
CDE06G1553 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 1.1e-53 214.2 180 55.0
Haze_11814 Corylus avellana HOM05D001314 ORTHO05D001165 5.5e-53 211.8 208 55.8
SHI04269 Sapria himalayana HOM05D003570 ORTHO05D004207 4.6e-52 208.8 204 50.5
Atru.chr11.2174 Acer truncatum HOM05D003570 ORTHO05D004207 1.8e-51 206.8 227 49.3
Zm00001eb212370 Zea mays HOM05D003570 ORTHO05D004207 5.7e-50 201.8 205 51.2
Zm00001eb062020 Zea mays HOM05D003570 ORTHO05D004207 2.8e-49 199.5 200 52.0
Os02g0596100 Oryza sativa ssp. japonica HOM05D003570 ORTHO05D004207 6.3e-49 198.4 205 50.7
unitig_22.g6426 Utricularia gibba HOM05D003570 ORTHO05D004207 1.4e-48 197.2 179 54.2
Pp3c9_21420 Physcomitrium patens HOM05D003570 ORTHO05D004207 9.1e-48 194.5 199 47.2
Haze_20779 Corylus avellana HOM05D003570 ORTHO05D004207 4.5e-47 192.2 114 80.7
Mapoly0004s0250 Marchantia polymorpha HOM05D003570 ORTHO05D004207 1.2e-44 184.1 214 41.1
CBR_g38118 Chara braunii HOM05D003570 ORTHO05D004207 2.6e-42 176.4 206 46.1
Aa31LG1G1680 Aethionema arabicum HOM05D003570 ORTHO05D004207 1.8e-40 170.2 214 44.4
Carub.0001s1286 Capsella rubella HOM05D003570 ORTHO05D004207 1.8e-40 170.2 223 43.5
Thhalv10007079m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 1.8e-40 170.2 211 44.5
Sopen04g013730 Solanum pennellii HOM05D003570 ORTHO05D004207 2.4e-40 169.9 110 70.9
AL1G24790 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 5.9e-39 165.2 208 43.3
Sp1g11650 Schrenkiella parvula HOM05D003570 ORTHO05D004207 1.0e-38 164.5 219 41.6
A09p63350 Brassica napus HOM05D003570 ORTHO05D004207 2.5e-37 159.8 226 39.4
C08p46780 Brassica napus HOM05D003570 ORTHO05D004207 2.5e-37 159.8 226 39.4
BraA09t41684Z Brassica rapa HOM05D003570 ORTHO05D004207 2.5e-37 159.8 226 39.4
BcaC07g41664 Brassica carinata HOM05D003570 ORTHO05D004207 5.5e-37 158.7 226 39.4
BolC8t52217H Brassica oleracea HOM05D003570 ORTHO05D004207 3.6e-36 156.0 228 39.5
CARHR013490 Cardamine hirsuta HOM05D003570 ORTHO05D004207 4.7e-36 155.6 216 43.1
AT1G13120 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 6.1e-36 155.2 192 42.2
SMO367G0645 Selaginella moellendorffii HOM05D003570 ORTHO05D004207 1.1e-34 151.0 191 42.4
AagrBONN_evm.TU.Sc2ySwM_362.2178 Anthoceros agrestis HOM05D003570 ORTHO05D004207 4.4e-34 149.1 170 40.6
EL10Ac8g19584 Beta vulgaris HOM05D003570 ORTHO05D004207 9.7e-34 147.9 119 60.5
Thhalv10001133m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 2.9e-30 136.3 215 40.0
Hma1.2p1_0054F.1_g030990 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 2.9e-30 136.3 89 70.8
TAR374G0522 Trochodendron aralioides HOM05D003570 ORTHO05D004207 3.6e-28 129.4 101 64.4
FAN08G3485 Fragaria x ananassa HOM05D003570 ORTHO05D004207 8.8e-27 124.8 124 54.0
CiPaw.02G032100 Carya illinoinensis HOM05D003570 ORTHO05D004207 2.8e-25 119.8 233 36.9
AL6G47680 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 8.2e-25 118.2 215 36.3
Medtr7g034350 Medicago truncatula HOM05D003570 ORTHO05D004207 1.4e-24 117.5 188 38.8
MCO05G059 Micromonas commoda HOM05D003570 ORTHO05D004207 2.4e-24 116.7 216 31.5
AL2G22720 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 2.7e-23 113.2 140 47.9
Actinidia15112 Actinidia chinensis HOM05D003570 ORTHO05D004207 1.5e-21 107.5 81 64.2
Actinidia15111 Actinidia chinensis HOM05D003570 ORTHO05D004207 5.5e-21 105.5 84 66.7
Cre06.g300900 Chlamydomonas reinhardtii HOM05D003570 ORTHO05D004207 1.6e-20 104.0 198 33.3
PRCOL_00001147 Prasinoderma coloniale HOM05D003570 ORTHO05D004207 3.6e-20 102.8 195 33.8
BolC5t29767H Brassica oleracea HOM05D003570 ORTHO05D004207 6.1e-20 102.1 194 33.5
Glyma.18G013000 Glycine max HOM05D003570 ORTHO05D004207 2.0e-18 97.1 82 58.5
BcaC05g25084 Brassica carinata HOM05D003570 ORTHO05D004207 4.4e-18 95.9 187 34.2
FvH4_5g15750 Fragaria vesca HOM05D003570 ORTHO05D004207 4.8e-17 92.4 72 66.7
Sp2g10400 Schrenkiella parvula HOM05D003570 ORTHO05D004207 1.1e-13 81.3 108 43.5
MD05G1151500 Malus domestica HOM05D003570 ORTHO05D004207 1.9e-13 80.5 49 77.6
C05p10220 Brassica napus HOM05D003570 ORTHO05D004207 1.6e-12 77.4 121 33.9
EL10Ac1g01653 Beta vulgaris HOM05D003570 ORTHO05D004207 1.4e-11 74.3 49 67.3
FAN13G1935 Fragaria x ananassa HOM05D003570 ORTHO05D004207 8.3e-09 65.1 62 51.6
FAN08G0154 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.4e-08 64.3 60 50.0
Dinv11043 Davidia involucrata HOM05D003570 ORTHO05D004207 5.4e-08 62.4 31 100.0


User provided reference genes

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