Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv15201 Davidia involucrata HOM05D006788 ORTHO05D008265 2.9e-103 378.6 199 100.0
Dinv39415 Davidia involucrata HOM05D006788 ORTHO05D008265 1.0e-20 104.4 60 86.7
Dinv13311 Davidia involucrata HOM05D001320 ORTHO05D006314 8.9e-20 101.3 60 81.7
Dinv39959 Davidia involucrata HOM05D001320 ORTHO05D006314 8.6e-15 84.7 48 87.5
Dinv36075 Davidia involucrata HOM05D006788 ORTHO05D008265 5.2e-12 75.5 60 65.0
Hma1.2p1_0203F.1_g086400 Hydrangea macrophylla HOM05D006788 ORTHO05D008265 1.2e-11 74.3 57 61.4
Dinv26809 Davidia involucrata HOM05D001320 ORTHO05D006314 4.4e-11 72.4 48 75.0
CAN.G358.124 Capsicum annuum HOM05D001320 ORTHO05D006314 6.4e-10 68.6 48 77.1
Nitab4.5_0001279g0120 Nicotiana tabacum HOM05D001320 ORTHO05D006314 6.4e-10 68.6 48 77.1
Nitab4.5_0002128g0050 Nicotiana tabacum HOM05D001320 ORTHO05D006314 6.4e-10 68.6 48 77.1
PGSC0003DMG400012683 Solanum tuberosum HOM05D001320 ORTHO05D006314 6.4e-10 68.6 48 77.1
Migut.L00296 Erythranthe guttata HOM05D001320 ORTHO05D006314 8.3e-10 68.2 48 66.7
Solyc02g085600.1 Solanum lycopersicum HOM05D001320 ORTHO05D006314 8.3e-10 68.2 48 75.0
Sopen02g030270 Solanum pennellii HOM05D001320 ORTHO05D006314 8.3e-10 68.2 48 75.0
Ah.03g139300 Amaranthus hybridus HOM05D001320 ORTHO05D006314 5.4e-09 65.5 46 60.9
Peaxi162Scf00427g00052 Petunia axillaris HOM05D001320 ORTHO05D006314 5.4e-09 65.5 48 75.0
EL10Ac6g14911 Beta vulgaris HOM05D001320 ORTHO05D006314 7.0e-09 65.1 46 60.9
CiPaw.01G034700 Carya illinoinensis HOM05D001320 ORTHO05D006314 7.0e-09 65.1 46 63.0
Cc07_g09180 Coffea canephora HOM05D001320 ORTHO05D006314 1.6e-08 63.9 48 68.8
Lsat_1_v5_gn_2_76860 Lactuca sativa HOM05D001320 ORTHO05D006314 2.0e-08 63.5 48 68.8
AUR62008003 Chenopodium quinoa HOM05D001320 ORTHO05D006314 3.5e-08 62.8 47 59.6
CSS0004157 Camellia sinensis var. sinensis HOM05D006788 ORTHO05D008265 4.6e-08 62.4 59 54.2
CSS0005112 Camellia sinensis var. sinensis HOM05D006788 ORTHO05D008265 4.6e-08 62.4 59 54.2
ECA238G2667 Erigeron canadensis HOM05D001320 ORTHO05D006314 4.6e-08 62.4 48 66.7
Lsat_1_v5_gn_3_78621 Lactuca sativa HOM05D001320 ORTHO05D006314 6.0e-08 62.0 48 64.6
GSVIVG01019006001 Vitis vinifera HOM05D001320 ORTHO05D006314 6.0e-08 62.0 48 64.6
CSS0019066 Camellia sinensis var. sinensis HOM05D001320 ORTHO05D006314 1.0e-07 61.2 48 62.5
Hma1.2p1_3707F.1_g337340 Hydrangea macrophylla HOM05D001320 ORTHO05D006314 1.0e-07 61.2 43 74.4
Lj4P197T11 Lonicera japonica HOM05D001320 ORTHO05D006314 1.0e-07 61.2 48 70.8
vmacro21636 Vaccinium macrocarpon HOM05D006788 ORTHO05D008265 1.7e-07 60.5 57 54.4
Actinidia12111 Actinidia chinensis HOM05D001320 ORTHO05D006314 2.3e-07 60.1 48 64.6
Sc03g0000890 Simmondsia chinensis HOM05D001320 ORTHO05D006314 2.3e-07 60.1 47 63.8
HanXRQChr06g0170161 Helianthus annuus HOM05D001320 ORTHO05D006314 3.0e-07 59.7 48 68.8
Lsat_1_v5_gn_4_153400 Lactuca sativa HOM05D001320 ORTHO05D006314 3.9e-07 59.3 48 66.7
QL06p045373 Quercus lobata HOM05D001320 ORTHO05D006314 3.9e-07 59.3 50 66.0
HanXRQChr11g0324871 Helianthus annuus HOM05D001320 ORTHO05D006314 6.6e-07 58.5 48 62.5
ClCG07G008990 Citrullus lanatus HOM05D001320 ORTHO05D006314 8.6e-07 58.2 46 63.0
Eucgr.H01257 Eucalyptus grandis HOM05D001320 ORTHO05D006314 8.6e-07 58.2 45 66.7
CANSAT01G1227 Cannabis sativa HOM05D001320 ORTHO05D006314 1.5e-06 57.4 47 61.7
Aqoxy6G01038 Aquilegia oxysepala HOM05D001320 ORTHO05D006314 1.9e-06 57.0 50 54.0
Ciclev10025197m.g Citrus clementina HOM05D001320 ORTHO05D006314 1.9e-06 57.0 47 57.4
TWI09G0309 Tripterygium wilfordii HOM05D001320 ORTHO05D006314 1.9e-06 57.0 46 65.2
TAR381G1338 Trochodendron aralioides HOM05D001320 ORTHO05D006314 1.9e-06 57.0 49 65.3
Oeu053003.2 Olea europaea HOM05D001320 ORTHO05D006314 2.5e-06 56.6 46 69.6
Potri.014G185300 Populus trichocarpa HOM05D006788 ORTHO05D008265 2.5e-06 56.6 61 52.5
MSTRG.15279 Avicennia marina HOM05D001320 ORTHO05D006314 3.3e-06 56.2 46 58.7
Actinidia22550 Actinidia chinensis HOM05D006788 ORTHO05D008265 4.3e-06 55.8 69 50.7
ClCG07G008970 Citrullus lanatus HOM05D001320 ORTHO05D006314 4.3e-06 55.8 47 57.4
HanXRQChr11g0326391 Helianthus annuus HOM05D001320 ORTHO05D006314 5.6e-06 55.5 48 62.5
MD15G1266500 Malus domestica HOM05D001320 ORTHO05D006314 5.6e-06 55.5 49 57.1
RcHm_v2.0_Chr2g0102171 Rosa chinensis HOM05D001320 ORTHO05D006314 5.6e-06 55.5 46 67.4
Atru.chr3.536 Acer truncatum HOM05D001320 ORTHO05D006314 7.3e-06 55.1 47 59.6
MELO3C017547.2 Cucumis melo HOM05D001320 ORTHO05D006314 7.3e-06 55.1 46 60.9
CsaV3_4G005220 Cucumis sativus L. HOM05D001320 ORTHO05D006314 9.5e-06 54.7 46 60.9
DCAR_017238 Daucus carota HOM05D001320 ORTHO05D006314 9.5e-06 54.7 48 58.3
FvH4_1g13740 Fragaria vesca HOM05D001320 ORTHO05D006314 9.5e-06 54.7 46 65.2
FAN19G2573 Fragaria x ananassa HOM05D001320 ORTHO05D006314 9.5e-06 54.7 46 65.2
HanXRQChr17g0563721 Helianthus annuus HOM05D001320 ORTHO05D006314 9.5e-06 54.7 48 64.6
Oeu021564.2 Olea europaea HOM05D001320 ORTHO05D006314 9.5e-06 54.7 46 56.5
unitig_748.g8519 Utricularia gibba HOM05D001320 ORTHO05D006314 9.5e-06 54.7 48 64.6


User provided reference genes

Program Settings