Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv15187 Davidia involucrata HOM05D001728 ORTHO05D004174 3.2e-84 315.1 164 100.0
Dinv44292 Davidia involucrata HOM05D001728 ORTHO05D004174 2.4e-55 219.2 147 78.2
Actinidia13363 Actinidia chinensis HOM05D001728 ORTHO05D004174 2.7e-54 215.7 148 75.7
CSS0047464 Camellia sinensis var. sinensis HOM05D001728 ORTHO05D004174 2.5e-52 209.1 150 76.0
CSS0014848 Camellia sinensis var. sinensis HOM05D001728 ORTHO05D004174 2.8e-51 205.7 150 75.3
Cfa015326 Carpinus fangiana HOM05D001728 ORTHO05D004174 8.0e-51 204.1 153 71.9
Haze_01289 Corylus avellana HOM05D001728 ORTHO05D004174 5.2e-50 201.4 153 70.6
CSS0020178 Camellia sinensis var. sinensis HOM05D001728 ORTHO05D004174 2.6e-49 199.1 149 72.5
Hma1.2p1_0013F.1_g008660 Hydrangea macrophylla HOM05D001728 ORTHO05D004174 2.6e-49 199.1 154 71.4
RcHm_v2.0_Chr4g0424811 Rosa chinensis HOM05D001728 ORTHO05D004174 2.6e-49 199.1 143 70.6
Thecc.04G299100 Theobroma cacao HOM05D001728 ORTHO05D004174 4.4e-49 198.4 149 69.1
QL06p011803 Quercus lobata HOM05D001728 ORTHO05D004174 7.5e-49 197.6 150 72.0
Manes.03G203400 Manihot esculenta HOM05D001728 ORTHO05D004174 9.8e-49 197.2 162 66.7
Prupe.1G119000 Prunus persica HOM05D001728 ORTHO05D004174 3.7e-48 195.3 157 70.1
FAN07G1735 Fragaria x ananassa HOM05D001728 ORTHO05D004174 8.3e-48 194.1 151 67.5
Potri.010G143900 Populus trichocarpa HOM05D001728 ORTHO05D004174 8.3e-48 194.1 159 65.4
CiPaw.02G075700 Carya illinoinensis HOM05D001728 ORTHO05D004174 1.8e-47 193.0 149 70.5
Gohir.D10G178500 Gossypium hirsutum HOM05D001728 ORTHO05D004174 2.4e-47 192.6 151 66.9
Gohir.A10G171400 Gossypium hirsutum HOM05D001728 ORTHO05D004174 3.1e-47 192.2 151 66.9
Gorai.011G199600 Gossypium raimondii HOM05D001728 ORTHO05D004174 4.1e-47 191.8 151 66.9
Atru.chr4.3016 Acer truncatum HOM05D001728 ORTHO05D004174 5.4e-47 191.4 153 65.4
Lj6C689T11 Lonicera japonica HOM05D001728 ORTHO05D004174 5.4e-47 191.4 151 67.5
Manes.15G005200 Manihot esculenta HOM05D001728 ORTHO05D004174 5.4e-47 191.4 155 68.4
Rhsim02G0004600 Rhododendron simsii HOM05D001728 ORTHO05D004174 1.6e-46 189.9 140 71.4
Sabra10G0111100 Salix brachista HOM05D001728 ORTHO05D004174 2.0e-46 189.5 155 66.5
Potri.008G106300 Populus trichocarpa HOM05D001728 ORTHO05D004174 4.5e-46 188.3 159 63.5
Sabra08G0080000 Salix brachista HOM05D001728 ORTHO05D004174 7.8e-46 187.6 159 64.2
Duzib151G0474 Durio zibethinus HOM05D001728 ORTHO05D004174 1.0e-45 187.2 149 65.8
Ciclev10005518m.g Citrus clementina HOM05D001728 ORTHO05D004174 1.3e-45 186.8 154 68.8
Actinidia14261 Actinidia chinensis HOM05D001728 ORTHO05D004174 3.8e-45 185.3 135 71.9
DCAR_027001 Daucus carota HOM05D001728 ORTHO05D004174 3.8e-45 185.3 154 65.6
FvH4_4g19560 Fragaria vesca HOM05D001728 ORTHO05D004174 3.8e-45 185.3 149 65.1
FAN12G2115 Fragaria x ananassa HOM05D001728 ORTHO05D004174 3.8e-45 185.3 149 65.1
vmacro15187 Vaccinium macrocarpon HOM05D001728 ORTHO05D004174 1.5e-44 183.3 145 69.0
TAR362G0220 Trochodendron aralioides HOM05D001728 ORTHO05D004174 1.6e-43 179.9 154 65.6
Duzib052G1178 Durio zibethinus HOM05D001728 ORTHO05D004174 2.1e-43 179.5 139 64.7
CiPaw.01G139100 Carya illinoinensis HOM05D001728 ORTHO05D004174 4.7e-43 178.3 151 65.6
GSVIVG01035008001 Vitis vinifera HOM05D001728 ORTHO05D004174 4.7e-43 178.3 150 68.0
arahy.Tifrunner.gnm1.ann1.C412JQ Arachis hypogaea HOM05D001728 ORTHO05D004174 1.0e-42 177.2 154 63.6
Lj4g0019830 Lotus japonicus HOM05D001728 ORTHO05D004174 1.0e-42 177.2 153 64.7
MD13G1155700 Malus domestica HOM05D001728 ORTHO05D004174 1.0e-42 177.2 157 63.7
arahy.Tifrunner.gnm1.ann1.2RYD9Q Arachis hypogaea HOM05D001728 ORTHO05D004174 1.4e-42 176.8 154 64.3
Nn3g21703 Nelumbo nucifera HOM05D001728 ORTHO05D004174 1.4e-42 176.8 153 66.0
Cpa.g.sc9.71 Carica papaya HOM05D001728 ORTHO05D004174 3.0e-42 175.6 164 63.4
Sed0012381 Sechium edule HOM05D001728 ORTHO05D004174 3.0e-42 175.6 155 59.4
TPR.G16843 Trifolium pratense HOM05D001728 ORTHO05D004174 4.0e-42 175.3 153 63.4
MD16G1155400 Malus domestica HOM05D001728 ORTHO05D004174 5.2e-42 174.9 157 63.7
TWI73G0756 Tripterygium wilfordii HOM05D001728 ORTHO05D004174 6.8e-42 174.5 150 63.3
Glyma.07G240600 Glycine max HOM05D001728 ORTHO05D004174 1.2e-41 173.7 149 63.8
TWI09G0044 Tripterygium wilfordii HOM05D001728 ORTHO05D004174 1.5e-41 173.3 154 59.7
MBI19_g07231_MAGBIO Magnolia biondii HOM05D001728 ORTHO05D004174 3.4e-41 172.2 153 63.4
Glyma.17G032800 Glycine max HOM05D001728 ORTHO05D004174 4.4e-41 171.8 151 64.2
Medtr4g121960 Medicago truncatula HOM05D001728 ORTHO05D004174 4.4e-41 171.8 153 64.1
TWI53G1778 Tripterygium wilfordii HOM05D001728 ORTHO05D004174 4.4e-41 171.8 150 62.7
Aqoxy2G02747 Aquilegia oxysepala HOM05D001728 ORTHO05D004174 1.7e-40 169.9 152 61.8
Lj3A830T25 Lonicera japonica HOM05D001728 ORTHO05D004174 1.7e-40 169.9 151 66.9
COL.COLO4_34632 Corchorus olitorius HOM05D001728 ORTHO05D004174 4.9e-40 168.3 162 58.6
Lj6g0011500 Lotus japonicus HOM05D001728 ORTHO05D004174 1.1e-39 167.2 155 61.3
DCAR_030467 Daucus carota HOM05D001728 ORTHO05D004174 2.4e-39 166.0 158 61.4
DCAR_030475 Daucus carota HOM05D001728 ORTHO05D004174 2.4e-39 166.0 158 61.4
Glyma.15G141200 Glycine max HOM05D001728 ORTHO05D004174 2.4e-39 166.0 153 62.1
Phvul.006G117400 Phaseolus vulgaris HOM05D001728 ORTHO05D004174 2.4e-39 166.0 152 61.2
Glyma.09G036300 Glycine max HOM05D001728 ORTHO05D004174 7.0e-39 164.5 153 60.8
Cc03_g00930 Coffea canephora HOM05D001728 ORTHO05D004174 2.0e-38 162.9 147 61.2
Sed0009760 Sechium edule HOM05D001728 ORTHO05D004174 2.7e-38 162.5 158 60.1
VMungo0540G0586 Vigna mungo HOM05D001728 ORTHO05D004174 2.7e-38 162.5 152 61.2
MELO3C006710.2 Cucumis melo HOM05D001728 ORTHO05D004174 1.3e-37 160.2 149 62.4
Gohir.D09G235700 Gossypium hirsutum HOM05D001728 ORTHO05D004174 1.7e-37 159.8 152 55.9
Ca_21446_v3 Cicer arietinum L. HOM05D001728 ORTHO05D004174 2.3e-37 159.5 160 58.8
Gorai.006G258700 Gossypium raimondii HOM05D001728 ORTHO05D004174 2.3e-37 159.5 152 55.9
ClCG05G006510 Citrullus lanatus HOM05D001728 ORTHO05D004174 3.0e-37 159.1 150 61.3
Phvul.003G113800 Phaseolus vulgaris HOM05D001728 ORTHO05D004174 3.0e-37 159.1 148 60.8
Psat4g024160 Pisum sativum HOM05D001728 ORTHO05D004174 3.0e-37 159.1 141 61.7
VMungo1215G0747 Vigna mungo HOM05D001728 ORTHO05D004174 3.9e-37 158.7 149 59.7
arahy.Tifrunner.gnm1.ann1.MYV2K5 Arachis hypogaea HOM05D001728 ORTHO05D004174 6.6e-37 157.9 146 62.3
PSO170G6117 Papaver somniferum HOM05D001728 ORTHO05D004174 6.6e-37 157.9 158 59.5
PSO357G0012 Papaver somniferum HOM05D001728 ORTHO05D004174 6.6e-37 157.9 158 59.5
Hma1.2p1_0078F.1_g039990 Hydrangea macrophylla HOM05D001728 ORTHO05D004174 8.6e-37 157.5 158 60.1
Oeu046575.1 Olea europaea HOM05D001728 ORTHO05D004174 1.5e-36 156.8 156 57.7
Lalb_Chr15g0089241 Lupinus albus HOM05D001728 ORTHO05D004174 4.3e-36 155.2 153 60.8
arahy.Tifrunner.gnm1.ann1.6P8AS9 Arachis hypogaea HOM05D001728 ORTHO05D004174 5.6e-36 154.8 146 61.6
Nitab4.5_0013613g0010 Nicotiana tabacum HOM05D001728 ORTHO05D004174 5.6e-36 154.8 139 60.4
Sopen12g033990 Solanum pennellii HOM05D001728 ORTHO05D004174 5.6e-36 154.8 126 65.1
CANSAT78G2180 Cannabis sativa HOM05D001728 ORTHO05D004174 7.3e-36 154.5 157 56.1
Solyc12g099310.2 Solanum lycopersicum HOM05D001728 ORTHO05D004174 7.3e-36 154.5 126 65.1
TPR.G27262 Trifolium pratense HOM05D001728 ORTHO05D004174 7.3e-36 154.5 129 65.1
PSO210G3088 Papaver somniferum HOM05D001728 ORTHO05D004174 1.6e-35 153.3 164 56.1
Nitab4.5_0002150g0220 Nicotiana tabacum HOM05D001728 ORTHO05D004174 2.8e-35 152.5 144 60.4
Lalb_Chr18g0058741 Lupinus albus HOM05D001728 ORTHO05D004174 4.7e-35 151.8 153 58.8
CsaV3_3G015120 Cucumis sativus L. HOM05D001728 ORTHO05D004174 6.2e-35 151.4 148 60.8
Eucgr.A00356 Eucalyptus grandis HOM05D001728 ORTHO05D004174 1.1e-34 150.6 146 59.6
PSO761G0142 Papaver somniferum HOM05D001728 ORTHO05D004174 1.1e-34 150.6 151 58.9
PGSC0003DMG400004699 Solanum tuberosum HOM05D001728 ORTHO05D004174 3.1e-34 149.1 126 62.7
Peaxi162Scf00017g00816 Petunia axillaris HOM05D001728 ORTHO05D004174 4.0e-34 148.7 126 62.7
AUR62016122 Chenopodium quinoa HOM05D001728 ORTHO05D004174 1.5e-33 146.7 146 61.0
AUR62041394 Chenopodium quinoa HOM05D001728 ORTHO05D004174 2.6e-33 146.0 153 58.8
Dinv33122 Davidia involucrata HOM05D001728 ORTHO05D004174 4.4e-33 145.2 153 60.8
Hund03118 Selenicereus undatus HOM05D001728 ORTHO05D004174 7.5e-33 144.4 153 60.1
Gohir.A09G234900 Gossypium hirsutum HOM05D001728 ORTHO05D004174 9.8e-33 144.1 152 52.6
Sc19g0003160 Simmondsia chinensis HOM05D001728 ORTHO05D004174 9.8e-33 144.1 149 59.1
ECA246G2493 Erigeron canadensis HOM05D001728 ORTHO05D004174 6.4e-32 141.4 152 55.9
Oeu019973.1 Olea europaea HOM05D001728 ORTHO05D004174 6.4e-32 141.4 147 55.1
MSTRG.21773 Avicennia marina HOM05D001728 ORTHO05D004174 4.1e-31 138.7 149 55.7
SalBow5G2437 Salvia bowleyana HOM05D001728 ORTHO05D004174 4.1e-31 138.7 153 55.6
EL10Ac3g05476 Beta vulgaris HOM05D001728 ORTHO05D004174 1.2e-30 137.1 125 64.0
MSTRG.10147 Avicennia marina HOM05D001728 ORTHO05D004174 1.6e-30 136.7 150 56.0
THA.LOC104818887 Tarenaya hassleriana HOM05D001728 ORTHO05D004174 1.6e-30 136.7 155 53.5
Oeu032018.1 Olea europaea HOM05D001728 ORTHO05D004174 2.7e-30 136.0 147 54.4
CDE02G0105 Ceratophyllum demersum HOM05D001728 ORTHO05D004174 4.6e-30 135.2 152 54.6
ATR0796G190 Amborella trichopoda HOM05D001728 ORTHO05D004174 1.0e-29 134.0 162 52.5
MSTRG.24818 Avicennia marina HOM05D001728 ORTHO05D004174 1.3e-29 133.7 148 56.1
CAN.G484.58 Capsicum annuum HOM05D001728 ORTHO05D004174 2.3e-29 132.9 152 52.0
Peaxi162Scf00228g00218 Petunia axillaris HOM05D001728 ORTHO05D004174 2.3e-29 132.9 159 53.5
PGR004G2896 Punica granatum HOM05D001728 ORTHO05D004174 3.0e-29 132.5 89 76.4
Duzib212G0357 Durio zibethinus HOM05D001728 ORTHO05D004174 3.9e-29 132.1 151 53.0
SalBow2G0520 Salvia bowleyana HOM05D001728 ORTHO05D004174 6.6e-29 131.3 153 55.6
SGA_v2.0_scaffold18G08401 Striga asiatica HOM05D001728 ORTHO05D004174 6.6e-29 131.3 126 59.5
Nn2g12682 Nelumbo nucifera HOM05D001728 ORTHO05D004174 8.6e-29 131.0 100 70.0
CDE08G1047 Ceratophyllum demersum HOM05D001728 ORTHO05D004174 1.9e-28 129.8 169 53.3
Nn3g19516 Nelumbo nucifera HOM05D001728 ORTHO05D004174 1.9e-28 129.8 75 85.3
Nn8g41281 Nelumbo nucifera HOM05D001728 ORTHO05D004174 1.9e-28 129.8 90 74.4
HanXRQChr05g0148261 Helianthus annuus HOM05D001728 ORTHO05D004174 2.5e-28 129.4 79 79.7
Oeu003758.1 Olea europaea HOM05D001728 ORTHO05D004174 1.2e-27 127.1 95 68.4
Hund11964 Selenicereus undatus HOM05D001728 ORTHO05D004174 2.1e-27 126.3 156 52.6
CARHR092250 Cardamine hirsuta HOM05D001728 ORTHO05D004174 2.8e-27 125.9 155 50.3
Mapoly0002s0227 Marchantia polymorpha HOM05D001728 ORTHO05D004174 3.6e-27 125.6 149 51.7
Lsat_1_v5_gn_1_41000 Lactuca sativa HOM05D001728 ORTHO05D004174 4.7e-27 125.2 101 65.3
HPP92_008952 Vanilla planifolia HOM05D001728 ORTHO05D004174 4.7e-27 125.2 121 60.3
Zm00001eb014740 Zea mays HOM05D001728 ORTHO05D004174 4.7e-27 125.2 81 76.5
PGR031G3596 Punica granatum HOM05D001728 ORTHO05D004174 6.2e-27 124.8 121 57.0
Sp3g15220 Schrenkiella parvula HOM05D001728 ORTHO05D004174 1.1e-26 124.0 161 47.2
Lsat_1_v5_gn_6_116240 Lactuca sativa HOM05D001728 ORTHO05D004174 1.4e-26 123.6 76 77.6
Carub.0003s1675 Capsella rubella HOM05D001728 ORTHO05D004174 3.1e-26 122.5 159 47.2
Nn2g11990 Nelumbo nucifera HOM05D001728 ORTHO05D004174 3.1e-26 122.5 108 64.8
Thhalv10021196m.g Eutrema salsugineum HOM05D001728 ORTHO05D004174 4.0e-26 122.1 122 54.9
Ah.13g071940 Amaranthus hybridus HOM05D001728 ORTHO05D004174 8.9e-26 120.9 122 59.0
AT3G17000 Arabidopsis thaliana HOM05D001728 ORTHO05D004174 8.9e-26 120.9 141 50.4
AL3G29980 Arabidopsis lyrata HOM05D001728 ORTHO05D004174 1.2e-25 120.6 155 49.0
Zm00001eb396060 Zea mays HOM05D001728 ORTHO05D004174 1.5e-25 120.2 125 54.4
THA.LOC104820301 Tarenaya hassleriana HOM05D001728 ORTHO05D004174 2.6e-25 119.4 152 48.7
BcaNung00213 Brassica carinata HOM05D001728 ORTHO05D004174 4.4e-25 118.6 150 46.0
C01p47260 Brassica napus HOM05D001728 ORTHO05D004174 4.4e-25 118.6 153 48.4
BraA01t02040Z Brassica rapa HOM05D001728 ORTHO05D004174 5.8e-25 118.2 150 46.7
A01p21340 Brassica napus HOM05D001728 ORTHO05D004174 7.5e-25 117.9 150 46.7
BolC1t04696H Brassica oleracea HOM05D001728 ORTHO05D004174 7.5e-25 117.9 153 48.4
Pp3c7_24370 Physcomitrium patens HOM05D001728 ORTHO05D004174 7.5e-25 117.9 129 50.4
BcaC09g48652 Brassica carinata HOM05D001728 ORTHO05D004174 9.9e-25 117.5 153 48.4
AL7G38800 Arabidopsis lyrata HOM05D001728 ORTHO05D004174 1.3e-24 117.1 150 45.3
Aa31LG10G5870 Aethionema arabicum HOM05D001728 ORTHO05D004174 1.7e-24 116.7 134 50.7
A01p37320 Brassica napus HOM05D001728 ORTHO05D004174 2.9e-24 115.9 153 47.7
BraA01t03790Z Brassica rapa HOM05D001728 ORTHO05D004174 2.9e-24 115.9 153 47.7
AagrBONN_evm.TU.Sc2ySwM_228.2363 Anthoceros agrestis HOM05D001728 ORTHO05D004174 3.7e-24 115.5 149 47.7
C01p26690 Brassica napus HOM05D001728 ORTHO05D004174 3.7e-24 115.5 150 46.0
Migut.G00049 Erythranthe guttata HOM05D001728 ORTHO05D004174 4.9e-24 115.2 116 58.6
Aa31LG8G4040 Aethionema arabicum HOM05D001728 ORTHO05D004174 1.1e-23 114.0 125 51.2
unitig_22.g6343 Utricularia gibba HOM05D001728 ORTHO05D004174 1.1e-23 114.0 120 55.8
BcaC09g50319 Brassica carinata HOM05D001728 ORTHO05D004174 2.4e-23 112.8 150 46.0
Os03g0308000 Oryza sativa ssp. japonica HOM05D001728 ORTHO05D004174 3.2e-23 112.5 129 50.4
CBR_g19546 Chara braunii HOM05D001728 ORTHO05D004174 4.1e-23 112.1 134 51.5
BolC1t02610H Brassica oleracea HOM05D001728 ORTHO05D004174 5.4e-23 111.7 150 45.3
Nn1g01603 Nelumbo nucifera HOM05D001728 ORTHO05D004174 5.4e-23 111.7 99 62.6
Carub.0007s2527 Capsella rubella HOM05D001728 ORTHO05D004174 1.6e-22 110.2 123 48.8
Thhalv10025677m.g Eutrema salsugineum HOM05D001728 ORTHO05D004174 1.0e-21 107.5 150 44.0
Sp7g14760 Schrenkiella parvula HOM05D001728 ORTHO05D004174 1.0e-21 107.5 124 49.2
Nn1g04497 Nelumbo nucifera HOM05D001728 ORTHO05D004174 8.6e-21 104.4 58 87.9
CARHR222630 Cardamine hirsuta HOM05D001728 ORTHO05D004174 1.1e-20 104.0 116 50.0
unitig_8.g3091 Utricularia gibba HOM05D001728 ORTHO05D004174 7.3e-20 101.3 121 49.6
Prupe.7G180600 Prunus persica HOM05D001728 ORTHO05D004174 2.1e-19 99.8 82 63.4
arahy.Tifrunner.gnm1.ann1.JD5JQQ Arachis hypogaea HOM05D001728 ORTHO05D004174 1.1e-18 97.4 66 72.7
Prupe.7G180200 Prunus persica HOM05D001728 ORTHO05D004174 4.0e-18 95.5 79 65.8
SMO116G0349 Selaginella moellendorffii HOM05D001728 ORTHO05D004174 5.2e-18 95.1 63 74.6
Prupe.5G033600 Prunus persica HOM05D001728 ORTHO05D004174 1.5e-17 93.6 68 67.6
HanXRQChr02g0048741 Helianthus annuus HOM05D001728 ORTHO05D004174 3.4e-17 92.4 123 46.3
CARHR274020 Cardamine hirsuta HOM05D001728 ORTHO05D004174 7.6e-17 91.3 57 73.7
Prupe.6G047000 Prunus persica HOM05D001728 ORTHO05D004174 9.9e-17 90.9 121 47.9
Prupe.7G179700 Prunus persica HOM05D001728 ORTHO05D004174 9.9e-17 90.9 68 63.2
vmacro02402 Vaccinium macrocarpon HOM05D001728 ORTHO05D004174 3.2e-15 85.9 57 73.7
Nn4g25590 Nelumbo nucifera HOM05D001728 ORTHO05D004174 3.5e-14 82.4 75 58.7
Cre03.g202897 Chlamydomonas reinhardtii HOM05D001728 ORTHO05D004174 3.0e-13 79.3 128 41.4
Prupe.7G179900 Prunus persica HOM05D001728 ORTHO05D004174 1.9e-12 76.6 75 56.0
HanXRQChr11g0353501 Helianthus annuus HOM05D001728 ORTHO05D004174 5.6e-12 75.1 45 73.3
Prupe.5G033500 Prunus persica HOM05D001728 ORTHO05D004174 1.8e-10 70.1 54 64.8
PRCOL_00004800 Prasinoderma coloniale HOM05D001728 ORTHO05D004174 2.0e-09 66.6 132 35.6
MCO14G158 Micromonas commoda HOM05D001728 ORTHO05D004174 2.6e-09 66.2 63 49.2


User provided reference genes

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