Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv15139 Davidia involucrata HOM05D005560 ORTHO05D006862 6.3e-61 237.3 121 100.0
Dinv44258 Davidia involucrata HOM05D005560 ORTHO05D006862 2.5e-57 225.3 121 93.4
Nn3g21792 Nelumbo nucifera HOM05D005560 ORTHO05D006862 4.8e-53 211.1 121 81.8
Lj6E694T0 Lonicera japonica HOM05D005560 ORTHO05D006862 7.0e-52 207.2 121 86.8
Prupe.1G113300 Prunus persica HOM05D005560 ORTHO05D006862 5.9e-51 204.1 121 84.3
Manes.11G109500 Manihot esculenta HOM05D005560 ORTHO05D006862 5.0e-50 201.1 119 84.0
vmacro09713 Vaccinium macrocarpon HOM05D005560 ORTHO05D006862 5.0e-50 201.1 121 85.1
Nitab4.5_0012592g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 6.5e-50 200.7 121 84.3
Solyc01g058280.4 Solanum lycopersicum HOM05D005560 ORTHO05D006862 1.5e-49 199.5 121 83.5
Manes.11G060400 Manihot esculenta HOM05D005560 ORTHO05D006862 4.2e-49 198.0 119 82.4
Sopen01g023770 Solanum pennellii HOM05D005560 ORTHO05D006862 4.2e-49 198.0 121 82.6
FAN07G2916 Fragaria x ananassa HOM05D005560 ORTHO05D006862 1.2e-48 196.4 121 78.5
TAR371G1140 Trochodendron aralioides HOM05D005560 ORTHO05D006862 1.2e-48 196.4 114 84.2
Sc13g0007210 Simmondsia chinensis HOM05D005560 ORTHO05D006862 1.6e-48 196.1 121 80.2
FAN12G4019 Fragaria x ananassa HOM05D005560 ORTHO05D006862 2.1e-48 195.7 121 78.5
Peaxi162Scf00228g00733 Petunia axillaris HOM05D005560 ORTHO05D006862 3.6e-48 194.9 121 83.5
CAN.G938.2 Capsicum annuum HOM05D005560 ORTHO05D006862 4.7e-48 194.5 121 81.8
Atru.chr4.3063 Acer truncatum HOM05D005560 ORTHO05D006862 8.0e-48 193.7 121 81.8
GSVIVG01034955001 Vitis vinifera HOM05D001281 ORTHO05D001139 8.0e-48 193.7 121 81.8
Sed0008051 Sechium edule HOM05D005560 ORTHO05D006862 1.8e-47 192.6 121 81.8
Gohir.A02G055900 Gossypium hirsutum HOM05D005560 ORTHO05D006862 2.3e-47 192.2 121 81.0
Gohir.D02G061100 Gossypium hirsutum HOM05D005560 ORTHO05D006862 2.3e-47 192.2 121 81.0
TWI09G0868 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 3.0e-47 191.8 121 81.0
Lalb_Chr18g0058561 Lupinus albus HOM05D005560 ORTHO05D006862 4.0e-47 191.4 121 76.0
Medtr2g033590 Medicago truncatula HOM05D005560 ORTHO05D006862 4.0e-47 191.4 121 78.5
Lj6g0013029 Lotus japonicus HOM05D005560 ORTHO05D006862 5.2e-47 191.0 121 76.9
RcHm_v2.0_Chr4g0425981 Rosa chinensis HOM05D005560 ORTHO05D006862 5.2e-47 191.0 121 78.5
Duzib212G0918 Durio zibethinus HOM05D005560 ORTHO05D006862 8.8e-47 190.3 121 78.5
FvH4_4g20620 Fragaria vesca HOM05D005560 ORTHO05D006862 8.8e-47 190.3 121 76.9
Potri.008G102200 Populus trichocarpa HOM05D005560 ORTHO05D006862 8.8e-47 190.3 121 79.3
THA.LOC104827102 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 8.8e-47 190.3 121 76.0
Cc06_g13180 Coffea canephora HOM05D005560 ORTHO05D006862 1.2e-46 189.9 121 77.7
MD16G1149600 Malus domestica HOM05D005560 ORTHO05D006862 1.2e-46 189.9 114 81.6
Medtr2g097970 Medicago truncatula HOM05D005560 ORTHO05D006862 1.2e-46 189.9 121 76.0
MD13G1149300 Malus domestica HOM05D005560 ORTHO05D006862 1.5e-46 189.5 114 82.5
Gohir.A10G174500 Gossypium hirsutum HOM05D005560 ORTHO05D006862 5.7e-46 187.6 121 76.0
CiPaw.01G134900 Carya illinoinensis HOM05D005560 ORTHO05D006862 7.5e-46 187.2 121 76.9
Hma1.2p1_1400F.1_g280950 Hydrangea macrophylla HOM05D005560 ORTHO05D006862 7.5e-46 187.2 104 90.4
Lalb_Chr20g0120691 Lupinus albus HOM05D005560 ORTHO05D006862 9.8e-46 186.8 121 74.4
QL06p012974 Quercus lobata HOM05D005560 ORTHO05D006862 9.8e-46 186.8 114 80.7
VMungo0540G1255 Vigna mungo HOM05D005560 ORTHO05D006862 1.3e-45 186.4 116 79.3
CSS0010593 Camellia sinensis var. sinensis HOM05D005560 ORTHO05D006862 1.7e-45 186.0 114 80.7
Cpa.g.sc9.16 Carica papaya HOM05D005560 ORTHO05D006862 1.7e-45 186.0 121 76.0
Ca_00962_v3 Cicer arietinum L. HOM05D005560 ORTHO05D006862 1.7e-45 186.0 121 75.2
Glyma.15G138200 Glycine max HOM05D005560 ORTHO05D006862 1.7e-45 186.0 121 75.2
CANSAT78G0499 Cannabis sativa HOM05D005560 ORTHO05D006862 2.2e-45 185.7 121 76.9
ECA246G4816 Erigeron canadensis HOM05D005560 ORTHO05D006862 2.2e-45 185.7 121 79.3
Phvul.006G120000 Phaseolus vulgaris HOM05D005560 ORTHO05D006862 2.8e-45 185.3 116 78.4
TPR.G33875 Trifolium pratense HOM05D005560 ORTHO05D006862 8.3e-45 183.7 121 75.2
PGSC0003DMG401029058 Solanum tuberosum HOM05D005560 ORTHO05D006862 1.4e-44 183.0 114 81.6
CsaV3_1G038810 Cucumis sativus L. HOM05D005560 ORTHO05D006862 1.8e-44 182.6 121 76.9
Glyma.17G036700 Glycine max HOM05D005560 ORTHO05D006862 1.8e-44 182.6 121 75.2
MSTRG.3846 Avicennia marina HOM05D005560 ORTHO05D006862 2.4e-44 182.2 121 72.7
PGR004G2070 Punica granatum HOM05D005560 ORTHO05D006862 3.1e-44 181.8 121 78.5
CDE06G0356 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 4.1e-44 181.4 121 76.0
COL.COLO4_34571 Corchorus olitorius HOM05D005560 ORTHO05D006862 5.4e-44 181.0 114 78.1
Gohir.D10G181000 Gossypium hirsutum HOM05D005560 ORTHO05D006862 7.0e-44 180.6 121 75.2
TPR.G30159 Trifolium pratense HOM05D005560 ORTHO05D006862 1.6e-43 179.5 121 73.6
Potri.010G148600 Populus trichocarpa HOM05D005560 ORTHO05D006862 2.0e-43 179.1 121 76.0
Gorai.005G068700 Gossypium raimondii HOM05D005560 ORTHO05D006862 3.5e-43 178.3 146 67.1
CiPaw.02G072600 Carya illinoinensis HOM05D005560 ORTHO05D006862 4.5e-43 177.9 113 77.0
CARHR287970 Cardamine hirsuta HOM05D005560 ORTHO05D006862 5.9e-43 177.6 114 76.3
Nn8g38759 Nelumbo nucifera HOM05D005560 ORTHO05D006862 7.7e-43 177.2 108 77.8
PSO782G0665 Papaver somniferum HOM05D005560 ORTHO05D006862 1.3e-42 176.4 112 76.8
PSO063G2615 Papaver somniferum HOM05D005560 ORTHO05D006862 1.7e-42 176.0 112 75.9
DCAR_026978 Daucus carota HOM05D005560 ORTHO05D006862 2.9e-42 175.3 104 86.5
Gorai.011G202500 Gossypium raimondii HOM05D005560 ORTHO05D006862 5.0e-42 174.5 121 73.6
Thhalv10005160m.g Eutrema salsugineum HOM05D005560 ORTHO05D006862 6.5e-42 174.1 114 74.6
Sabra10G0114700 Salix brachista HOM05D005560 ORTHO05D006862 6.5e-42 174.1 111 80.2
THA.LOC104818873 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 6.5e-42 174.1 121 69.4
Sp2g19850 Schrenkiella parvula HOM05D005560 ORTHO05D006862 1.1e-41 173.3 114 74.6
CAN.G1860.1 Capsicum annuum HOM05D005560 ORTHO05D006862 1.5e-41 172.9 114 77.2
arahy.Tifrunner.gnm1.ann1.JWH7Q7 Arachis hypogaea HOM05D005560 ORTHO05D006862 2.5e-41 172.2 112 75.0
AL8G23330 Arabidopsis lyrata HOM05D005560 ORTHO05D006862 3.2e-41 171.8 114 73.7
BcaC04g23733 Brassica carinata HOM05D005560 ORTHO05D006862 3.2e-41 171.8 114 73.7
MELO3C015305.2 Cucumis melo HOM05D005560 ORTHO05D006862 4.2e-41 171.4 114 76.3
HanXRQChr01g0022341 Helianthus annuus HOM05D005560 ORTHO05D006862 4.2e-41 171.4 101 82.2
Carub.0008s0942 Capsella rubella HOM05D005560 ORTHO05D006862 7.2e-41 170.6 114 72.8
BcaB04g19617 Brassica carinata HOM05D005560 ORTHO05D006862 9.5e-41 170.2 114 72.8
A09p04870 Brassica napus HOM05D005560 ORTHO05D006862 9.5e-41 170.2 114 72.8
C09p05260 Brassica napus HOM05D005560 ORTHO05D006862 9.5e-41 170.2 114 72.8
BolC9t53453H Brassica oleracea HOM05D005560 ORTHO05D006862 9.5e-41 170.2 114 72.8
AT5G49540 Arabidopsis thaliana HOM05D005560 ORTHO05D006862 1.6e-40 169.5 114 72.8
Ciclev10006078m.g Citrus clementina HOM05D005560 ORTHO05D006862 2.1e-40 169.1 112 77.7
Oeu048287.1 Olea europaea HOM05D005560 ORTHO05D006862 2.1e-40 169.1 109 75.2
Haze_01347 Corylus avellana HOM05D005560 ORTHO05D006862 2.8e-40 168.7 104 80.8
CAN.G484.71 Capsicum annuum HOM05D005560 ORTHO05D006862 3.6e-40 168.3 121 72.7
Migut.G00039 Erythranthe guttata HOM05D005560 ORTHO05D006862 4.7e-40 167.9 111 73.0
Nitab4.5_0002561g0080 Nicotiana tabacum HOM05D005560 ORTHO05D006862 2.3e-39 165.6 104 80.8
A06p38280 Brassica napus HOM05D005560 ORTHO05D006862 3.0e-39 165.2 115 72.2
Ah.13g071490 Amaranthus hybridus HOM05D005560 ORTHO05D006862 4.0e-39 164.9 112 78.6
MBI10_g06741_MAGBIO Magnolia biondii HOM05D005560 ORTHO05D006862 4.0e-39 164.9 104 75.0
SEGI_13216 Sequoiadendron giganteum HOM05D005560 ORTHO05D006862 5.2e-39 164.5 115 68.7
SGA_v2.0_scaffold157G37338 Striga asiatica HOM05D005560 ORTHO05D006862 1.5e-38 162.9 111 71.2
EL10Ac3g05546 Beta vulgaris HOM05D005560 ORTHO05D006862 2.0e-38 162.5 112 75.9
Sed0013449 Sechium edule HOM05D005560 ORTHO05D006862 7.5e-38 160.6 104 78.8
Lsat_1_v5_gn_6_116081 Lactuca sativa HOM05D005560 ORTHO05D006862 1.7e-37 159.5 104 80.8
Thecc.04G305600 Theobroma cacao HOM05D005560 ORTHO05D006862 2.8e-37 158.7 110 75.5
Aa31LG11G8340 Aethionema arabicum HOM05D005560 ORTHO05D006862 3.7e-37 158.3 107 72.0
ClCG03G017390 Citrullus lanatus HOM05D005560 ORTHO05D006862 8.3e-37 157.1 104 76.9
Glyma.09G033400 Glycine max HOM05D005560 ORTHO05D006862 8.3e-37 157.1 114 71.1
Hund11992 Selenicereus undatus HOM05D005560 ORTHO05D006862 1.1e-36 156.8 102 79.4
arahy.Tifrunner.gnm1.ann1.K4HITJ Arachis hypogaea HOM05D005560 ORTHO05D006862 1.4e-36 156.4 104 74.0
SalBow8G4800 Salvia bowleyana HOM05D005560 ORTHO05D006862 3.1e-36 155.2 104 71.2
BraA09t36124Z Brassica rapa HOM05D005560 ORTHO05D006862 5.4e-36 154.5 109 67.9
Aqoxy5G02923 Aquilegia oxysepala HOM05D005560 ORTHO05D006862 7.0e-36 154.1 102 76.5
Psat0s5068g0040 Pisum sativum HOM05D005560 ORTHO05D006862 1.2e-35 153.3 104 72.1
HanXRQChr10g0310551 Helianthus annuus HOM05D005560 ORTHO05D006862 2.0e-35 152.5 89 84.3
unitig_37.g12416 Utricularia gibba HOM05D005560 ORTHO05D007484 2.7e-35 152.1 106 67.9
BolC7t44528H Brassica oleracea HOM05D005560 ORTHO05D006862 7.8e-35 150.6 110 67.3
QL02p001630 Quercus lobata HOM05D005560 ORTHO05D006862 1.7e-34 149.4 90 78.9
TWI53G0383 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 2.3e-34 149.1 104 71.2
Lsat_1_v5_gn_3_139661 Lactuca sativa HOM05D005560 ORTHO05D006862 2.9e-34 148.7 99 79.8
Zm00001eb295100 Zea mays HOM05D005560 ORTHO05D006862 3.8e-34 148.3 105 64.8
Eucgr.F02752 Eucalyptus grandis HOM05D005560 ORTHO05D006862 5.0e-34 147.9 126 65.9
Zm00001eb343110 Zea mays HOM05D005560 ORTHO05D006862 6.6e-34 147.5 105 64.8
AUR62016242 Chenopodium quinoa HOM05D005560 ORTHO05D006862 8.6e-34 147.1 83 86.7
HPP92_015326 Vanilla planifolia HOM05D005560 ORTHO05D006862 1.5e-33 146.4 107 66.4
ATR0598G271 Amborella trichopoda HOM05D005560 ORTHO05D006862 4.3e-33 144.8 105 69.5
CDE07G1301 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 1.2e-32 143.3 89 79.8
Mapoly0008s0274 Marchantia polymorpha HOM05D005560 ORTHO05D006862 1.0e-31 140.2 111 57.7
Migut.O00585 Erythranthe guttata HOM05D005560 ORTHO05D006862 8.9e-31 137.1 101 66.3
BraA06t26743Z Brassica rapa HOM05D005560 ORTHO05D006862 2.9e-29 132.1 103 65.0
AagrBONN_evm.TU.Sc2ySwM_362.2649 Anthoceros agrestis HOM05D005560 ORTHO05D006862 1.8e-28 129.4 103 57.3
SMO117G0178 Selaginella moellendorffii HOM05D005560 ORTHO05D006862 2.3e-26 122.5 101 56.4
AagrBONN_evm.TU.Sc2ySwM_340.65 Anthoceros agrestis HOM05D005560 ORTHO05D006862 1.9e-25 119.4 93 59.1
Oeu052158.1 Olea europaea HOM05D005560 ORTHO05D006862 2.5e-25 119.0 109 57.8
AUR62032779 Chenopodium quinoa HOM05D005560 ORTHO05D006862 4.3e-25 118.2 75 82.7
CBR_g22909 Chara braunii HOM05D005560 ORTHO05D006862 1.2e-22 110.2 113 46.0
Nitab4.5_0008521g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 1.5e-22 109.8 70 78.6
Nn8g41304 Nelumbo nucifera HOM05D005560 ORTHO05D006862 9.2e-20 100.5 62 80.6
arahy.Tifrunner.gnm1.ann1.CCFX3U Arachis hypogaea HOM05D001281 ORTHO05D001139 3.0e-18 95.5 105 54.3
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 6.6e-18 94.4 79 60.8
Nn1g07816 Nelumbo nucifera HOM05D005560 ORTHO05D006862 2.8e-16 89.0 66 65.2
PRCOL_00001634 Prasinoderma coloniale HOM05D005560 ORTHO05D006862 3.4e-14 82.0 109 42.2
arahy.Tifrunner.gnm1.ann1.NI9QGM Arachis hypogaea HOM05D005560 ORTHO05D006862 6.0e-11 71.2 81 49.4
TWI73G0491 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 5.1e-10 68.2 52 61.5
MCO06G009 Micromonas commoda HOM05D005560 ORTHO05D006862 1.2e-08 63.5 108 34.3
CSS0033510 Camellia sinensis var. sinensis HOM05D034713 ORTHO05D006862 4.0e-07 58.5 71 49.3
Cre14.g614250 Chlamydomonas reinhardtii HOM05D005560 ORTHO05D006862 1.5e-06 56.6 99 30.3


User provided reference genes

Program Settings