Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv15093 Davidia involucrata HOM05D000686 ORTHO05D000512 3.5e-46 188.0 96 100.0
Dinv15091 Davidia involucrata HOM05D000686 ORTHO05D000512 6.6e-21 104.0 75 70.7
Dinv14356 Davidia involucrata HOM05D000686 ORTHO05D000512 3.6e-19 98.2 69 72.5
Actinidia12230 Actinidia chinensis HOM05D000686 ORTHO05D000512 8.1e-19 97.1 68 69.1
Manes.10G015728 Manihot esculenta HOM05D000686 ORTHO05D000512 8.9e-18 93.6 83 54.2
Manes.10G015700 Manihot esculenta HOM05D000686 ORTHO05D000512 1.2e-17 93.2 83 54.2
Manes.10G015784 Manihot esculenta HOM05D000686 ORTHO05D000512 1.2e-17 93.2 83 54.2
Potri.019G003400 Populus trichocarpa HOM05D000686 ORTHO05D000512 1.5e-17 92.8 68 66.2
Potri.019G003200 Populus trichocarpa HOM05D000686 ORTHO05D000512 2.0e-17 92.4 75 61.3
GSVIVG01026627001 Vitis vinifera HOM05D000686 ORTHO05D000512 3.4e-17 91.7 69 66.7
MD11G1231700 Malus domestica HOM05D000686 ORTHO05D000512 5.8e-17 90.9 69 65.2
Sabra16G0193200 Salix brachista HOM05D000686 ORTHO05D000512 7.6e-17 90.5 68 64.7
Atru.chr3.1293 Acer truncatum HOM05D000686 ORTHO05D000512 9.9e-17 90.1 83 57.8
MBI17_g21474_MAGBIO Magnolia biondii HOM05D000686 ORTHO05D000512 9.9e-17 90.1 74 67.6
Potri.019G003700 Populus trichocarpa HOM05D000686 ORTHO05D000512 9.9e-17 90.1 68 63.2
Sabra16G0193300 Salix brachista HOM05D000686 ORTHO05D000512 9.9e-17 90.1 68 64.7
Manes.14G118900 Manihot esculenta HOM05D000686 ORTHO05D000512 1.7e-16 89.4 68 58.8
Potri.019G003600 Populus trichocarpa HOM05D000686 ORTHO05D000512 1.7e-16 89.4 90 53.3
Sabra16G0193400 Salix brachista HOM05D000686 ORTHO05D000512 2.9e-16 88.6 68 64.7
Atru.chr4.1019 Acer truncatum HOM05D000686 ORTHO05D000512 3.7e-16 88.2 83 57.8
Potri.001G307500 Populus trichocarpa HOM05D000686 ORTHO05D000512 3.7e-16 88.2 68 64.7
Ciclev10025675m.g Citrus clementina HOM05D000686 ORTHO05D000512 6.4e-16 87.4 90 53.3
MD11G1231900 Malus domestica HOM05D000686 ORTHO05D000512 6.4e-16 87.4 69 63.8
Potri.019G003300 Populus trichocarpa HOM05D000686 ORTHO05D000512 8.3e-16 87.0 68 60.3
Potri.019G003500 Populus trichocarpa HOM05D000686 ORTHO05D000512 8.3e-16 87.0 68 60.3
GSVIVG01026621001 Vitis vinifera HOM05D000686 ORTHO05D000512 8.3e-16 87.0 69 65.2
Hma1.2p1_0708F.1_g207150 Hydrangea macrophylla HOM05D000686 ORTHO05D000512 1.1e-15 86.7 75 65.3
GSVIVG01026626001 Vitis vinifera HOM05D000686 ORTHO05D000512 1.1e-15 86.7 69 62.3
Eucgr.I00274 Eucalyptus grandis HOM05D000686 ORTHO05D000512 1.4e-15 86.3 68 61.8
Lj4A858G26 Lonicera japonica HOM05D000686 ORTHO05D000512 1.4e-15 86.3 69 60.9
Nn5g28760 Nelumbo nucifera HOM05D000686 ORTHO05D000512 1.9e-15 85.9 74 63.5
Potri.019G003800 Populus trichocarpa HOM05D000686 ORTHO05D000512 2.4e-15 85.5 68 58.8
Aqoxy4G01167 Aquilegia oxysepala HOM05D000686 ORTHO05D000512 4.1e-15 84.7 69 62.3
Eucgr.I00275 Eucalyptus grandis HOM05D000686 ORTHO05D000512 4.1e-15 84.7 89 52.8
Lj4C858G3 Lonicera japonica HOM05D000686 ORTHO05D000512 5.4e-15 84.3 91 53.8
Manes.12G149600 Manihot esculenta HOM05D000686 ORTHO05D000512 9.2e-15 83.6 68 55.9
TWI31G1467 Tripterygium wilfordii HOM05D000686 ORTHO05D000512 9.2e-15 83.6 69 59.4
Atru.chr5.633 Acer truncatum HOM05D000686 ORTHO05D000512 1.2e-14 83.2 83 54.2
Eucgr.I00273 Eucalyptus grandis HOM05D000686 ORTHO05D000512 1.2e-14 83.2 68 60.3
PSO541G4944 Papaver somniferum HOM05D000686 ORTHO05D000512 1.6e-14 82.8 85 50.6
RcHm_v2.0_Chr2g0119591 Rosa chinensis HOM05D000686 ORTHO05D000512 1.6e-14 82.8 83 55.4
CiPaw.03G130100 Carya illinoinensis HOM05D000686 ORTHO05D000512 2.1e-14 82.4 69 59.4
Dinv14355 Davidia involucrata HOM05D000686 ORTHO05D000512 2.1e-14 82.4 54 81.5
Atru.chr5.631 Acer truncatum HOM05D000686 ORTHO05D000512 2.7e-14 82.0 69 58.0
TWI75G0346 Tripterygium wilfordii HOM05D000686 ORTHO05D000512 2.7e-14 82.0 69 59.4
Eucgr.I00271 Eucalyptus grandis HOM05D000686 ORTHO05D000512 4.6e-14 81.3 68 60.3
FAN28G2819 Fragaria x ananassa HOM05D000686 ORTHO05D000512 6.0e-14 80.9 70 62.9
Ciclev10027391m.g Citrus clementina HOM05D000686 ORTHO05D000512 7.8e-14 80.5 69 56.5
PSO675G2577 Papaver somniferum HOM05D000686 ORTHO05D000512 7.8e-14 80.5 85 50.6
FvH4_1g23750 Fragaria vesca HOM05D000686 ORTHO05D000512 1.0e-13 80.1 69 58.0
CANSAT01G1852 Cannabis sativa HOM05D000686 ORTHO05D000512 1.3e-13 79.7 81 53.1
CSS0017918 Camellia sinensis var. sinensis HOM05D000686 ORTHO05D000512 1.7e-13 79.3 77 54.5
FAN19G1241 Fragaria x ananassa HOM05D000686 ORTHO05D000512 1.7e-13 79.3 83 55.4
FAN23G2454 Fragaria x ananassa HOM05D000686 ORTHO05D000512 1.7e-13 79.3 83 55.4
PSO541G0056 Papaver somniferum HOM05D000686 ORTHO05D000512 2.3e-13 79.0 85 48.2
PSO675G7693 Papaver somniferum HOM05D000686 ORTHO05D000512 2.3e-13 79.0 85 49.4
FAN28G1982 Fragaria x ananassa HOM05D000686 ORTHO05D000512 3.0e-13 78.6 69 59.4
PGR119G1097 Punica granatum HOM05D000686 ORTHO05D000512 3.0e-13 78.6 68 58.8
PSO541G6485 Papaver somniferum HOM05D000686 ORTHO05D000512 3.9e-13 78.2 67 56.7
PSO675G0792 Papaver somniferum HOM05D000686 ORTHO05D000512 3.9e-13 78.2 76 50.0
PGR119G2321 Punica granatum HOM05D000686 ORTHO05D000512 3.9e-13 78.2 68 57.4
FvH4_1g23770 Fragaria vesca HOM05D000686 ORTHO05D000512 5.1e-13 77.8 83 54.2
PSO017G1531 Papaver somniferum HOM05D000686 ORTHO05D000512 5.1e-13 77.8 85 49.4
FvH4_1g23740 Fragaria vesca HOM05D000686 ORTHO05D000512 8.6e-13 77.0 68 61.8
PSO675G7511 Papaver somniferum HOM05D000686 ORTHO05D000512 8.6e-13 77.0 85 49.4
RcHm_v2.0_Chr2g0119621 Rosa chinensis HOM05D000686 ORTHO05D000512 8.6e-13 77.0 69 58.0
Ciclev10025686m.g Citrus clementina HOM05D000686 ORTHO05D000512 1.1e-12 76.6 69 56.5
PSO675G5810 Papaver somniferum HOM05D000686 ORTHO05D000512 1.1e-12 76.6 69 55.1
TAR628G0859 Trochodendron aralioides HOM05D000686 ORTHO05D000512 1.1e-12 76.6 51 72.5
FAN23G0647 Fragaria x ananassa HOM05D000686 ORTHO05D000512 1.5e-12 76.3 69 55.1
Atru.chr3.3225 Acer truncatum HOM05D000686 ORTHO05D000512 2.5e-12 75.5 54 68.5
Eucgr.E03410 Eucalyptus grandis HOM05D000686 ORTHO05D000512 2.5e-12 75.5 68 55.9
SHI15530 Sapria himalayana HOM05D000686 ORTHO05D000512 2.5e-12 75.5 68 51.5
Eucgr.L02174 Eucalyptus grandis HOM05D000686 ORTHO05D000512 3.3e-12 75.1 68 55.9
PSO541G5302 Papaver somniferum HOM05D000686 ORTHO05D000512 3.3e-12 75.1 85 47.1
Eucgr.E03400 Eucalyptus grandis HOM05D000686 ORTHO05D000512 4.3e-12 74.7 81 51.9
Eucgr.E03418 Eucalyptus grandis HOM05D000686 ORTHO05D000512 4.3e-12 74.7 81 51.9
PGR119G1251 Punica granatum HOM05D000686 ORTHO05D000512 4.3e-12 74.7 77 50.6
TAR628G0613 Trochodendron aralioides HOM05D000686 ORTHO05D000512 4.3e-12 74.7 51 68.6
CiPaw.03G130000 Carya illinoinensis HOM05D000686 ORTHO05D000512 5.6e-12 74.3 67 58.2
QL06p031046 Quercus lobata HOM05D000686 ORTHO05D000512 5.6e-12 74.3 91 48.4
CANSAT01G0181 Cannabis sativa HOM05D000686 ORTHO05D000512 7.3e-12 73.9 72 52.8
Eucgr.I00263 Eucalyptus grandis HOM05D000686 ORTHO05D000512 7.3e-12 73.9 68 54.4
CiPaw.03G129900 Carya illinoinensis HOM05D000686 ORTHO05D000512 1.2e-11 73.2 80 51.2
Eucgr.I00264 Eucalyptus grandis HOM05D000686 ORTHO05D000512 1.2e-11 73.2 68 52.9
QL06p030959 Quercus lobata HOM05D000686 ORTHO05D000512 1.6e-11 72.8 90 47.8
PSO675G6959 Papaver somniferum HOM05D000686 ORTHO05D000512 2.8e-11 72.0 90 45.6
Eucgr.E03421 Eucalyptus grandis HOM05D000686 ORTHO05D000512 3.6e-11 71.6 81 50.6
RcHm_v2.0_Chr2g0119641 Rosa chinensis HOM05D000686 ORTHO05D000512 8.1e-11 70.5 54 64.8
PGR119G0398 Punica granatum HOM05D000686 ORTHO05D000512 1.1e-10 70.1 68 51.5
CiPaw.03G129500 Carya illinoinensis HOM05D000686 ORTHO05D000512 1.4e-10 69.7 80 48.8
CANSAT01G0820 Cannabis sativa HOM05D000686 ORTHO05D000512 1.8e-10 69.3 72 54.2
CiPaw.03G129700 Carya illinoinensis HOM05D000686 ORTHO05D000512 1.8e-10 69.3 80 51.2
ATR0820G061 Amborella trichopoda HOM05D000686 ORTHO05D000512 2.4e-10 68.9 64 56.2
Eucgr.I00262 Eucalyptus grandis HOM05D000686 ORTHO05D000512 2.4e-10 68.9 68 54.4
Manes.10G015950 Manihot esculenta HOM05D000686 ORTHO05D000512 2.4e-10 68.9 85 45.9
PGR119G2168 Punica granatum HOM05D000686 ORTHO05D000512 2.4e-10 68.9 68 52.9
Cfa002808 Carpinus fangiana HOM05D000686 ORTHO05D000512 3.1e-10 68.6 61 54.1
Eucgr.I00265 Eucalyptus grandis HOM05D000686 ORTHO05D000512 4.0e-10 68.2 68 50.0
TAR628G1167 Trochodendron aralioides HOM05D000686 ORTHO05D000512 1.2e-09 66.6 50 62.0
PGR119G2215 Punica granatum HOM05D000686 ORTHO05D000512 1.5e-09 66.2 68 51.5
QL06p030919 Quercus lobata HOM05D000686 ORTHO05D000512 1.5e-09 66.2 54 57.4
Haze_18557 Corylus avellana HOM05D000686 ORTHO05D000512 2.0e-09 65.9 51 58.8
DCAR_001413 Daucus carota HOM05D000686 ORTHO05D000512 4.4e-09 64.7 83 42.2
Sabra19G0004200 Salix brachista HOM05D000686 ORTHO05D000512 4.4e-09 64.7 54 55.6
PSO724G0248 Papaver somniferum HOM05D000686 ORTHO05D000512 2.2e-08 62.4 63 47.6
Eucgr.E03412 Eucalyptus grandis HOM05D000686 ORTHO05D000512 2.9e-08 62.0 54 55.6
HPP92_016152 Vanilla planifolia HOM05D000686 ORTHO05D000512 2.9e-08 62.0 69 47.8
HPP92_004416 Vanilla planifolia HOM05D000686 ORTHO05D000512 3.8e-08 61.6 69 49.3
PSO135G0831 Papaver somniferum HOM05D000686 ORTHO05D000512 1.1e-07 60.1 54 53.7
Sabra19G0021700 Salix brachista HOM05D000686 ORTHO05D000512 1.1e-07 60.1 66 43.9
SEGI_35816 Sequoiadendron giganteum HOM05D000686 ORTHO05D000512 1.4e-07 59.7 79 39.2
Eucgr.E03417 Eucalyptus grandis HOM05D000686 ORTHO05D000512 2.4e-07 58.9 54 51.9
Os04g0423100 Oryza sativa ssp. japonica HOM05D000686 ORTHO05D000512 7.1e-07 57.4 75 42.7
Zm00001eb422370 Zea mays HOM05D000686 ORTHO05D000512 2.1e-06 55.8 83 42.2
SEGI_26755 Sequoiadendron giganteum HOM05D000686 ORTHO05D000512 6.0e-06 54.3 90 40.0
Pp3c7_17950 Physcomitrium patens HOM05D000686 ORTHO05D000512 7.8e-06 53.9 66 47.0


User provided reference genes

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