Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv15081 Davidia involucrata HOM05D005065 ORTHO05D005944 5.1e-131 471.1 239 100.0
Dinv41716 Davidia involucrata HOM05D005065 ORTHO05D005944 1.5e-50 203.8 195 62.6
Hma1.2p1_0937F.1_g239030 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 1.5e-50 203.8 182 64.3
Cc00_g13630 Coffea canephora HOM05D005065 ORTHO05D005944 2.6e-42 176.4 201 54.2
Rhsim06G0094100 Rhododendron simsii HOM05D005065 ORTHO05D005944 1.7e-41 173.7 186 55.9
Actinidia02576 Actinidia chinensis HOM05D005065 ORTHO05D005944 2.2e-41 173.3 182 57.7
Actinidia23336 Actinidia chinensis HOM05D005065 ORTHO05D005944 7.8e-39 164.9 132 64.4
Thecc.08G184600 Theobroma cacao HOM05D005065 ORTHO05D005944 1.3e-38 164.1 198 52.0
Hma1.2p1_0060F.1_g032900 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 1.9e-37 160.2 196 54.6
Duzib211G0507 Durio zibethinus HOM05D005065 ORTHO05D005944 3.3e-37 159.5 178 51.7
Oeu017883.1 Olea europaea HOM05D005065 ORTHO05D005944 3.3e-37 159.5 175 50.9
Potri.013G111700 Populus trichocarpa HOM05D005065 ORTHO05D005944 3.3e-37 159.5 189 53.4
CiPaw.07G160300 Carya illinoinensis HOM05D005065 ORTHO05D005944 1.3e-36 157.5 191 53.4
Manes.18G101500 Manihot esculenta HOM05D005065 ORTHO05D005944 6.2e-36 155.2 165 57.0
MSTRG.25443 Avicennia marina HOM05D005065 ORTHO05D005944 1.1e-35 154.5 174 53.4
Cfa013844 Carpinus fangiana HOM05D005065 ORTHO05D005944 1.4e-35 154.1 193 52.3
MSTRG.1526 Avicennia marina HOM05D005065 ORTHO05D005944 6.9e-35 151.8 189 51.9
Oeu029996.1 Olea europaea HOM05D005065 ORTHO05D005944 9.0e-35 151.4 197 54.3
DCAR_011533 Daucus carota HOM05D005065 ORTHO05D005944 2.0e-34 150.2 175 52.6
Glyma.20G174600 Glycine max HOM05D005065 ORTHO05D005944 3.8e-33 146.0 126 61.1
Peaxi162Scf00268g00105 Petunia axillaris HOM05D005065 ORTHO05D005944 3.8e-33 146.0 200 52.0
MSTRG.22454 Avicennia marina HOM05D005065 ORTHO05D005944 4.9e-33 145.6 175 50.9
Phvul.007G088700 Phaseolus vulgaris HOM05D005065 ORTHO05D005944 4.9e-33 145.6 160 53.8
VMungo0720G1099 Vigna mungo HOM05D005065 ORTHO05D005944 4.9e-33 145.6 162 54.3
Gohir.A05G275300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 6.4e-33 145.2 198 48.0
Peaxi162Scf01013g00001 Petunia axillaris HOM05D005065 ORTHO05D005944 8.4e-33 144.8 182 54.9
Potri.019G082866 Populus trichocarpa HOM05D005065 ORTHO05D005944 8.4e-33 144.8 138 60.9
Lalb_Chr21g0305721 Lupinus albus HOM05D005065 ORTHO05D005944 1.4e-32 144.1 160 58.1
Haze_22517 Corylus avellana HOM05D005065 ORTHO05D005944 1.9e-32 143.7 195 51.8
Lalb_Chr02g0141751 Lupinus albus HOM05D005065 ORTHO05D005944 2.4e-32 143.3 126 60.3
Glyma.10G217400 Glycine max HOM05D005065 ORTHO05D005944 7.1e-32 141.7 162 54.9
Gohir.D05G277400 Gossypium hirsutum HOM05D005065 ORTHO05D005944 7.1e-32 141.7 198 47.0
Gohir.A13G121100 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.6e-31 140.6 165 52.1
Gorai.009G290400 Gossypium raimondii HOM05D005065 ORTHO05D005944 2.7e-31 139.8 198 46.5
Duzib177G1167 Durio zibethinus HOM05D005065 ORTHO05D005944 3.5e-31 139.4 192 47.4
PGR042G0986 Punica granatum HOM05D005065 ORTHO05D005944 3.5e-31 139.4 173 49.1
QL02p033454 Quercus lobata HOM05D005065 ORTHO05D005944 4.6e-31 139.0 187 47.6
Eucgr.F02608 Eucalyptus grandis HOM05D005065 ORTHO05D005944 1.3e-30 137.5 147 49.7
Ca_10622_v3 Cicer arietinum L. HOM05D005065 ORTHO05D005944 2.3e-30 136.7 167 51.5
CiPaw.08G058800 Carya illinoinensis HOM05D005065 ORTHO05D005944 3.0e-30 136.3 197 47.2
Lalb_Chr03g0036131 Lupinus albus HOM05D005065 ORTHO05D005944 3.0e-30 136.3 159 54.1
Lalb_Chr06g0162001 Lupinus albus HOM05D005065 ORTHO05D005944 3.9e-30 136.0 176 50.6
Rhsim11G0058500 Rhododendron simsii HOM05D005065 ORTHO05D005944 3.9e-30 136.0 168 53.6
Gohir.D13G125200 Gossypium hirsutum HOM05D005065 ORTHO05D005944 8.7e-30 134.8 183 49.2
Gorai.013G140100 Gossypium raimondii HOM05D005065 ORTHO05D005944 8.7e-30 134.8 163 52.1
Migut.C01259 Erythranthe guttata HOM05D005065 ORTHO05D005944 1.9e-29 133.7 179 44.7
SalBow7G0321 Salvia bowleyana HOM05D005065 ORTHO05D005944 5.6e-29 132.1 178 47.8
Manes.02G192500 Manihot esculenta HOM05D005065 ORTHO05D005944 9.6e-29 131.3 167 49.7
Solyc06g065340.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 1.3e-28 131.0 200 49.0
Cpa.g.sc66.33 Carica papaya HOM05D005065 ORTHO05D005944 1.6e-28 130.6 176 47.7
PGSC0003DMG400026113 Solanum tuberosum HOM05D005065 ORTHO05D005944 1.6e-28 130.6 208 46.6
Nn5g27677 Nelumbo nucifera HOM05D005065 ORTHO05D005944 2.1e-28 130.2 184 48.9
Prupe.8G058900 Prunus persica HOM05D005065 ORTHO05D005944 2.1e-28 130.2 157 51.0
SGA_v2.0_scaffold149G36582 Striga asiatica HOM05D005065 ORTHO05D005944 2.8e-28 129.8 174 49.4
Lalb_Chr01g0010191 Lupinus albus HOM05D005065 ORTHO05D005944 2.4e-27 126.7 165 50.9
HanXRQChr04g0107491 Helianthus annuus HOM05D005065 ORTHO05D005944 3.1e-27 126.3 162 51.9
Atru.chr13.1737 Acer truncatum HOM05D005065 ORTHO05D005944 6.9e-27 125.2 208 44.7
CSS0016137 Camellia sinensis var. sinensis HOM05D005065 ORTHO05D005944 9.0e-27 124.8 193 50.3
Oeu021210.1 Olea europaea HOM05D005065 ORTHO05D005944 1.5e-26 124.0 161 50.3
Ciclev10002433m.g Citrus clementina HOM05D005065 ORTHO05D005944 2.0e-26 123.6 191 44.5
Nn1g08370 Nelumbo nucifera HOM05D005065 ORTHO05D005944 2.0e-26 123.6 176 47.2
Aqoxy5G02380 Aquilegia oxysepala HOM05D005065 ORTHO05D005944 3.4e-26 122.9 172 45.9
TPR.G8826 Trifolium pratense HOM05D005065 ORTHO05D005944 4.5e-26 122.5 174 47.1
Lsat_1_v5_gn_1_10621 Lactuca sativa HOM05D005065 ORTHO05D005944 1.7e-25 120.6 129 54.3
Lalb_Chr19g0129461 Lupinus albus HOM05D005065 ORTHO05D005944 1.7e-25 120.6 160 44.4
Lj5g0001381 Lotus japonicus HOM05D005065 ORTHO05D005944 2.9e-25 119.8 166 47.6
TWI60G1480 Tripterygium wilfordii HOM05D005065 ORTHO05D005944 3.8e-25 119.4 185 43.2
Nitab4.5_0000277g0040 Nicotiana tabacum HOM05D005065 ORTHO05D005944 8.4e-25 118.2 160 51.2
PGSC0003DMG400014033 Solanum tuberosum HOM05D005065 ORTHO05D005944 8.4e-25 118.2 184 44.6
CAN.G199.8 Capsicum annuum HOM05D005065 ORTHO05D005944 1.1e-24 117.9 225 42.7
TAR624G0039 Trochodendron aralioides HOM05D005065 ORTHO05D005944 1.9e-24 117.1 175 43.4
PGR102G0471 Punica granatum HOM05D005065 ORTHO05D005944 3.2e-24 116.3 170 44.7
Sopen06g023830 Solanum pennellii HOM05D005065 ORTHO05D005944 4.2e-24 115.9 205 44.9
ClCG11G008090 Citrullus lanatus HOM05D005065 ORTHO05D005944 7.1e-24 115.2 143 52.4
Sopen11g009740 Solanum pennellii HOM05D005065 ORTHO05D005944 1.6e-23 114.0 200 44.5
Psat6g187880 Pisum sativum HOM05D005065 ORTHO05D005944 2.1e-23 113.6 175 42.9
MELO3C008125.2 Cucumis melo HOM05D005065 ORTHO05D005944 2.7e-23 113.2 143 49.7
MD05G1042300 Malus domestica HOM05D005065 ORTHO05D005944 2.7e-23 113.2 187 44.4
Oeu025521.1 Olea europaea HOM05D005065 ORTHO05D005944 2.7e-23 113.2 155 48.4
Solyc11g018710.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 6.0e-23 112.1 200 42.5
Lsat_1_v5_gn_6_109661 Lactuca sativa HOM05D005065 ORTHO05D005944 1.8e-22 110.5 163 45.4
FAN15G3279 Fragaria x ananassa HOM05D005065 ORTHO05D005944 2.3e-22 110.2 182 46.2
Gorai.006G130800 Gossypium raimondii HOM05D005065 ORTHO05D005944 5.1e-22 109.0 170 42.4
Sabra19G0094300 Salix brachista HOM05D005065 ORTHO05D005944 5.1e-22 109.0 145 50.3
Eucgr.F04121 Eucalyptus grandis HOM05D005065 ORTHO05D005944 1.9e-21 107.1 134 44.0
Sabra13G0095100 Salix brachista HOM05D005065 ORTHO05D005944 1.9e-21 107.1 154 51.3
Gohir.D09G113300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 7.4e-21 105.1 170 41.2
RcHm_v2.0_Chr6g0270871 Rosa chinensis HOM05D005065 ORTHO05D005944 7.4e-21 105.1 177 42.9
BcaB03g14918 Brassica carinata HOM05D005065 ORTHO05D005944 1.3e-20 104.4 175 47.4
Gohir.A09G116200 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.3e-20 104.4 174 39.7
A02p17610 Brassica napus HOM05D005065 ORTHO05D005944 2.1e-20 103.6 141 44.7
BraA02t06807Z Brassica rapa HOM05D005065 ORTHO05D005944 2.1e-20 103.6 141 44.7
Sed0021334 Sechium edule HOM05D005065 ORTHO05D005944 6.2e-20 102.1 135 46.7
Ah.05g178140 Amaranthus hybridus HOM05D005065 ORTHO05D005944 1.1e-19 101.3 182 44.0
EL10Ac1g00090 Beta vulgaris HOM05D005065 ORTHO05D005944 1.8e-19 100.5 183 43.7
BcaB05g24697 Brassica carinata HOM05D005065 ORTHO05D005944 1.8e-19 100.5 165 44.8
Nitab4.5_0009211g0010 Nicotiana tabacum HOM05D005065 ORTHO05D005944 3.1e-19 99.8 142 52.1
BraA07t31379Z Brassica rapa HOM05D005065 ORTHO05D005944 6.9e-19 98.6 178 43.8
AT1G71970 Arabidopsis thaliana HOM05D005065 ORTHO05D005944 1.5e-18 97.4 159 40.3
Carub.0002s1875 Capsella rubella HOM05D005065 ORTHO05D005944 2.6e-18 96.7 152 44.1
HanXRQChr05g0150531 Helianthus annuus HOM05D005065 ORTHO05D005944 2.6e-18 96.7 157 43.9
BcaC03g15318 Brassica carinata HOM05D005065 ORTHO05D005944 3.4e-18 96.3 181 41.4
C02p29260 Brassica napus HOM05D005065 ORTHO05D005944 3.4e-18 96.3 181 41.4
BolC2t08977H Brassica oleracea HOM05D005065 ORTHO05D005944 3.4e-18 96.3 181 41.4
SGA_v2.0_scaffold24G10554 Striga asiatica HOM05D005065 ORTHO05D005944 4.5e-18 95.9 165 43.0
BcaC08g46641 Brassica carinata HOM05D005065 ORTHO05D005944 5.8e-18 95.5 170 43.5
BolC6t39660H Brassica oleracea HOM05D005065 ORTHO05D005944 5.8e-18 95.5 170 43.5
C06p46070 Brassica napus HOM05D005065 ORTHO05D005944 7.6e-18 95.1 170 43.5
Thhalv10019856m.g Eutrema salsugineum HOM05D005065 ORTHO05D005944 7.6e-18 95.1 150 42.7
AL2G31580 Arabidopsis lyrata HOM05D005065 ORTHO05D005944 1.0e-17 94.7 158 40.5
PSO782G1863 Papaver somniferum HOM05D005065 ORTHO05D005944 1.0e-17 94.7 175 41.1
Sp1g20190 Schrenkiella parvula HOM05D005065 ORTHO05D005944 1.7e-17 94.0 161 42.2
AT1G22680 Arabidopsis thaliana HOM05D005065 ORTHO05D005944 4.9e-17 92.4 158 42.4
CANSAT25G3119 Cannabis sativa HOM05D005065 ORTHO05D005944 8.4e-17 91.7 173 37.6
A07p30470 Brassica napus HOM05D005065 ORTHO05D005944 1.1e-16 91.3 173 40.5
BraA07t30683Z Brassica rapa HOM05D005065 ORTHO05D005944 1.1e-16 91.3 173 40.5
BcaB03g15639 Brassica carinata HOM05D005065 ORTHO05D005944 1.9e-16 90.5 177 40.1
Carub.0001s2220 Capsella rubella HOM05D005065 ORTHO05D005944 2.5e-16 90.1 182 39.0
Sp5g27040 Schrenkiella parvula HOM05D005065 ORTHO05D005944 2.5e-16 90.1 147 42.2
AL1G36220 Arabidopsis lyrata HOM05D005065 ORTHO05D005944 5.5e-16 89.0 174 40.2
C06p35230 Brassica napus HOM05D005065 ORTHO05D005944 5.5e-16 89.0 165 41.8
MBI09_g14012_MAGBIO Magnolia biondii HOM05D005065 ORTHO05D005944 7.1e-16 88.6 182 39.0
Rhsim11G0058400 Rhododendron simsii HOM05D005065 ORTHO05D005944 7.1e-16 88.6 138 47.8
BolC6t38629H Brassica oleracea HOM05D005065 ORTHO05D005944 9.3e-16 88.2 164 42.1
THA.LOC104800116 Tarenaya hassleriana HOM05D005065 ORTHO05D005944 9.3e-16 88.2 189 39.2
CARHR064790 Cardamine hirsuta HOM05D005065 ORTHO05D005944 3.5e-15 86.3 189 38.6
CARHR023050 Cardamine hirsuta HOM05D005065 ORTHO05D005944 1.3e-14 84.3 158 41.8
Medtr1g096610 Medicago truncatula HOM05D005065 ORTHO05D005944 2.3e-14 83.6 170 36.5
Nitab4.5_0002483g0030 Nicotiana tabacum HOM05D005065 ORTHO05D005944 3.0e-14 83.2 136 43.4
SGA_v2.0_scaffold118G32491 Striga asiatica HOM05D005065 ORTHO05D005944 3.9e-14 82.8 151 41.7
THA.LOC104809741 Tarenaya hassleriana HOM05D005065 ORTHO05D005944 3.9e-14 82.8 197 37.6
Sc23g0001280 Simmondsia chinensis HOM05D005065 ORTHO05D005944 1.6e-12 77.4 143 37.1
ATR0003G028 Amborella trichopoda HOM05D005065 ORTHO05D005944 2.8e-12 76.6 205 37.6
Aa31LG4G8650 Aethionema arabicum HOM05D005065 ORTHO05D005944 2.4e-11 73.6 176 38.6
CDE06G2798 Ceratophyllum demersum HOM05D005065 ORTHO05D005944 3.1e-11 73.2 141 44.0
FAN24G2022 Fragaria x ananassa HOM05D005065 ORTHO05D005944 3.1e-11 73.2 168 42.3
ATR0820G021 Amborella trichopoda HOM05D005065 ORTHO05D005944 4.1e-11 72.8 206 35.0
FvH4_2g11630 Fragaria vesca HOM05D005065 ORTHO05D005944 4.1e-11 72.8 128 44.5
FAN20G1873 Fragaria x ananassa HOM05D005065 ORTHO05D005944 5.3e-11 72.4 167 41.9
HPP92_009270 Vanilla planifolia HOM05D005065 ORTHO05D005944 9.0e-11 71.6 207 34.8
A07p38140 Brassica napus HOM05D005065 ORTHO05D005944 2.0e-10 70.5 91 47.3
TAR381G1423 Trochodendron aralioides HOM05D005065 ORTHO05D005944 2.6e-10 70.1 50 64.0
HPP92_005697 Vanilla planifolia HOM05D005065 ORTHO05D005944 6.5e-09 65.5 149 36.2
Aa31LG7G6580 Aethionema arabicum HOM05D005065 ORTHO05D005944 8.5e-09 65.1 187 34.2
HPP92_006868 Vanilla planifolia HOM05D064031 ORTHO05D005944 6.1e-07 58.9 158 34.8
HPP92_006851 Vanilla planifolia HOM05D064031 ORTHO05D005944 1.0e-06 58.2 157 33.8
CDE07G0499 Ceratophyllum demersum HOM05D000271 ORTHO05D009467 3.0e-06 56.6 122 34.4
Aqoxy6G02455 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 5.1e-06 55.8 129 34.1
CDE04G2604 Ceratophyllum demersum HOM05D000375 ORTHO05D000240 6.7e-06 55.5 124 33.9


User provided reference genes

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