Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14987 Davidia involucrata HOM05D005597 ORTHO05D007304 0.0e+00 1153.7 571 100.0
Lj8A149T49 Lonicera japonica HOM05D005597 ORTHO05D007304 1.3e-286 989.2 574 84.8
CSS0014594 Camellia sinensis var. sinensis HOM05D005597 ORTHO05D007304 3.9e-286 987.6 566 85.0
Hma1.2p1_1016F.1_g248150 Hydrangea macrophylla HOM05D005597 ORTHO05D007304 3.4e-282 974.5 566 84.1
TAR624G0947 Trochodendron aralioides HOM05D005597 ORTHO05D007304 8.4e-281 969.9 568 82.6
Actinidia12571 Actinidia chinensis HOM05D005597 ORTHO05D007304 1.1e-280 969.5 569 83.1
TAR626G0744 Trochodendron aralioides HOM05D005597 ORTHO05D007304 1.2e-279 966.1 568 82.2
Rhsim06G0207300 Rhododendron simsii HOM05D005597 ORTHO05D007304 1.7e-278 962.2 569 83.1
CiPaw.11G160900 Carya illinoinensis HOM05D005597 ORTHO05D007304 8.1e-276 953.4 573 82.0
Atru.chr2.2174 Acer truncatum HOM05D005597 ORTHO05D007304 9.9e-274 946.4 575 79.8
Gorai.013G173400 Gossypium raimondii HOM05D005597 ORTHO05D007304 2.2e-273 945.3 576 79.7
Cfa019573 Carpinus fangiana HOM05D005597 ORTHO05D007304 1.4e-272 942.6 571 81.3
Gohir.A13G149000 Gossypium hirsutum HOM05D005597 ORTHO05D007304 2.4e-272 941.8 576 79.3
Manes.03G102000 Manihot esculenta HOM05D005597 ORTHO05D007304 3.2e-272 941.4 569 80.0
Thecc.07G110000 Theobroma cacao HOM05D005597 ORTHO05D007304 9.3e-272 939.9 579 79.4
FAN11G3052 Fragaria x ananassa HOM05D005597 ORTHO05D007304 1.2e-271 939.5 568 80.3
CsaV3_4G033140 Cucumis sativus L. HOM05D005597 ORTHO05D007304 2.1e-271 938.7 572 79.2
FvH4_3g18450 Fragaria vesca HOM05D005597 ORTHO05D007304 2.7e-271 938.3 568 80.3
Duzib187G0678 Durio zibethinus HOM05D005597 ORTHO05D007304 6.0e-271 937.2 578 79.8
Duzib213G0141 Durio zibethinus HOM05D005597 ORTHO05D007304 6.0e-271 937.2 579 78.2
ClCG11G017480 Citrullus lanatus HOM05D005597 ORTHO05D007304 7.9e-271 936.8 570 79.6
QL08p026520 Quercus lobata HOM05D005597 ORTHO05D007304 7.9e-271 936.8 545 83.1
Nn1g09131 Nelumbo nucifera HOM05D005597 ORTHO05D007304 1.3e-270 936.0 568 79.8
FAN21G1763 Fragaria x ananassa HOM05D005597 ORTHO05D007304 8.7e-270 933.3 568 80.1
SGA_v2.0_scaffold47G17797 Striga asiatica HOM05D005597 ORTHO05D007304 1.3e-268 929.5 569 79.3
CAN.G162.8 Capsicum annuum HOM05D005597 ORTHO05D007304 4.8e-268 927.5 569 78.0
COL.COLO4_17568 Corchorus olitorius HOM05D005597 ORTHO05D007304 1.5e-266 922.5 602 75.9
FAN16G1691 Fragaria x ananassa HOM05D005597 ORTHO05D007304 1.5e-266 922.5 576 78.5
arahy.Tifrunner.gnm1.ann1.06PSEJ Arachis hypogaea HOM05D005597 ORTHO05D007304 3.4e-266 921.4 571 78.5
TWI38G1600 Tripterygium wilfordii HOM05D005597 ORTHO05D007304 9.9e-266 919.8 568 78.7
arahy.Tifrunner.gnm1.ann1.Z1JPC4 Arachis hypogaea HOM05D005597 ORTHO05D007304 2.9e-265 918.3 571 78.1
PGR083G2138 Punica granatum HOM05D005597 ORTHO05D007304 1.1e-264 916.4 574 78.6
Aqoxy1G02067 Aquilegia oxysepala HOM05D005597 ORTHO05D007304 1.4e-264 916.0 571 77.6
RcHm_v2.0_Chr5g0031201 Rosa chinensis HOM05D005597 ORTHO05D007304 1.4e-264 916.0 572 79.2
PGSC0003DMG400012388 Solanum tuberosum HOM05D005597 ORTHO05D007304 1.9e-264 915.6 571 77.2
TWI39G1070 Tripterygium wilfordii HOM05D005597 ORTHO05D007304 2.5e-264 915.2 570 78.8
MSTRG.12867 Avicennia marina HOM05D005597 ORTHO05D007304 2.1e-263 912.1 570 76.7
Solyc07g062540.3 Solanum lycopersicum HOM05D005597 ORTHO05D007304 2.7e-263 911.8 571 76.9
Migut.H01992 Erythranthe guttata HOM05D005597 ORTHO05D007304 3.5e-263 911.4 568 77.6
MD03G1241900 Malus domestica HOM05D005597 ORTHO05D007304 4.6e-263 911.0 574 78.9
Sopen07g030770 Solanum pennellii HOM05D005597 ORTHO05D007304 4.6e-263 911.0 571 77.1
Lalb_Chr01g0006811 Lupinus albus HOM05D005597 ORTHO05D007304 1.0e-262 909.8 552 78.6
Prupe.4G166500 Prunus persica HOM05D005597 ORTHO05D007304 3.0e-262 908.3 569 78.0
Potri.011G110800 Populus trichocarpa HOM05D005597 ORTHO05D007304 2.5e-261 905.2 572 77.3
MD11G1261800 Malus domestica HOM05D005597 ORTHO05D007304 4.3e-261 904.4 571 77.9
THA.LOC104812323 Tarenaya hassleriana HOM05D005597 ORTHO05D007304 9.6e-261 903.3 571 76.5
Eucgr.F01228 Eucalyptus grandis HOM05D005597 ORTHO05D007304 4.8e-260 901.0 577 77.3
Lj3g0024865 Lotus japonicus HOM05D005597 ORTHO05D007304 4.8e-260 901.0 568 76.9
Ca_03990_v3 Cicer arietinum L. HOM05D005597 ORTHO05D007304 6.9e-259 897.1 563 78.0
Phvul.005G066500 Phaseolus vulgaris HOM05D005597 ORTHO05D007304 1.2e-258 896.3 572 76.7
Sed0009860 Sechium edule HOM05D005597 ORTHO05D007304 1.2e-258 896.3 528 81.4
VMungo1080G1355 Vigna mungo HOM05D005597 ORTHO05D007304 1.5e-258 896.0 572 77.4
Medtr2g076680 Medicago truncatula HOM05D005597 ORTHO05D007304 2.6e-258 895.2 564 76.6
Ciclev10019496m.g Citrus clementina HOM05D005597 ORTHO05D007304 4.5e-258 894.4 577 75.9
GSVIVG01014208001 Vitis vinifera HOM05D005597 ORTHO05D007304 5.8e-258 894.0 511 84.9
CDE02G4663 Ceratophyllum demersum HOM05D005597 ORTHO05D007304 7.6e-258 893.6 567 76.0
Glyma.13G270500 Glycine max HOM05D005597 ORTHO05D007304 2.2e-257 892.1 531 80.2
Glyma.12G229300 Glycine max HOM05D005597 ORTHO05D007304 2.9e-257 891.7 531 80.2
vmacro11932 Vaccinium macrocarpon HOM05D005597 ORTHO05D007304 1.9e-256 889.0 598 72.7
MBI07_g03181_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D007304 3.5e-255 884.8 557 77.0
CSS0003229 Camellia sinensis var. sinensis HOM05D005597 ORTHO05D007304 4.6e-255 884.4 565 78.6
C05p15120 Brassica napus HOM05D005597 ORTHO05D007304 1.3e-254 882.9 566 74.7
BcaB02g06666 Brassica carinata HOM05D005597 ORTHO05D007304 1.8e-254 882.5 567 74.6
Cc05_g11200 Coffea canephora HOM05D005597 ORTHO05D007304 1.8e-254 882.5 511 82.4
A06p12800 Brassica napus HOM05D005597 ORTHO05D007304 2.3e-254 882.1 566 74.2
BraA06t24441Z Brassica rapa HOM05D005597 ORTHO05D007304 2.3e-254 882.1 566 74.4
Carub.0001s1664 Capsella rubella HOM05D005597 ORTHO05D007304 3.0e-254 881.7 566 74.2
AL1G29070 Arabidopsis lyrata HOM05D005597 ORTHO05D007304 3.9e-254 881.3 566 75.3
BolC5t30227H Brassica oleracea HOM05D005597 ORTHO05D007304 3.9e-254 881.3 566 74.4
Hund10564 Selenicereus undatus HOM05D005597 ORTHO05D007304 6.7e-254 880.6 559 76.2
AT1G16900 Arabidopsis thaliana HOM05D005597 ORTHO05D007304 1.9e-253 879.0 566 74.4
AUR62043187 Chenopodium quinoa HOM05D005597 ORTHO05D007304 1.6e-252 875.9 572 74.8
Sabra11G0098300 Salix brachista HOM05D005597 ORTHO05D007304 1.6e-252 875.9 623 71.3
BcaC05g25546 Brassica carinata HOM05D005597 ORTHO05D007304 2.2e-252 875.5 567 73.9
ECA240G4584 Erigeron canadensis HOM05D000832 ORTHO05D000982 2.8e-252 875.2 570 75.4
Sp1g15040 Schrenkiella parvula HOM05D005597 ORTHO05D007304 3.7e-252 874.8 566 74.2
Lsat_1_v5_gn_9_100260 Lactuca sativa HOM05D005597 ORTHO05D007304 6.3e-252 874.0 571 73.7
CARHR017370 Cardamine hirsuta HOM05D005597 ORTHO05D007304 1.1e-251 873.2 570 74.4
TPR.G19385 Trifolium pratense HOM05D005597 ORTHO05D007304 5.3e-251 870.9 573 74.3
HanXRQChr14g0442721 Helianthus annuus HOM05D005597 ORTHO05D007304 6.9e-251 870.5 569 73.8
Thhalv10007218m.g Eutrema salsugineum HOM05D005597 ORTHO05D007304 9.0e-251 870.2 566 73.7
FAN25G0069 Fragaria x ananassa HOM05D005597 ORTHO05D007304 1.2e-250 869.8 574 75.6
A08p31230 Brassica napus HOM05D005597 ORTHO05D007304 1.5e-250 869.4 566 73.9
BraA08t35046Z Brassica rapa HOM05D005597 ORTHO05D007304 1.5e-250 869.4 566 73.9
C08p17610 Brassica napus HOM05D005597 ORTHO05D007304 4.5e-250 867.8 569 73.1
BcaC07g38821 Brassica carinata HOM05D005597 ORTHO05D007304 1.0e-249 866.7 568 73.2
EL10Ac4g08334 Beta vulgaris HOM05D005597 ORTHO05D007304 1.2e-247 859.8 591 72.8
BcaB03g13027 Brassica carinata HOM05D005597 ORTHO05D007304 1.2e-247 859.8 546 74.2
PSO500G0209 Papaver somniferum HOM05D005597 ORTHO05D007304 2.7e-247 858.6 575 72.9
PSO675G3712 Papaver somniferum HOM05D005597 ORTHO05D007304 2.7e-247 858.6 575 72.9
ATR0602G238 Amborella trichopoda HOM05D005597 ORTHO05D007304 1.0e-246 856.7 568 73.6
BolC8t49386H Brassica oleracea HOM05D005597 ORTHO05D007304 6.7e-246 854.0 569 71.7
CANSAT35G0471 Cannabis sativa HOM05D005597 ORTHO05D007304 1.5e-245 852.8 533 79.4
Haze_09335 Corylus avellana HOM05D005597 ORTHO05D007304 4.7e-239 831.2 656 67.1
unitig_749.g13539 Utricularia gibba HOM05D005597 ORTHO05D007304 1.7e-236 822.8 568 69.9
Os01g0209000 Oryza sativa ssp. japonica HOM05D005597 ORTHO05D007304 7.0e-235 817.4 529 73.3
Zm00001eb120330 Zea mays HOM05D005597 ORTHO05D007304 2.5e-232 808.9 540 72.6
Aa31LG7G1320 Aethionema arabicum HOM05D005597 ORTHO05D007304 2.3e-230 802.4 560 71.2
SalBow7G0883 Salvia bowleyana HOM05D005597 ORTHO05D007304 2.3e-230 802.4 510 76.1
HPP92_004052 Vanilla planifolia HOM05D005597 ORTHO05D007304 2.7e-215 752.3 618 62.1
Duzib213G0888 Durio zibethinus HOM05D005597 ORTHO05D007304 6.1e-215 751.1 447 80.3
AUR62019570 Chenopodium quinoa HOM05D005597 ORTHO05D007304 7.5e-213 744.2 570 66.5
DCAR_013152 Daucus carota HOM05D005597 ORTHO05D007304 1.8e-206 723.0 439 80.4
Hma1.2p1_1016F.1_g248140 Hydrangea macrophylla HOM05D005597 ORTHO05D007304 7.5e-205 717.6 433 82.7
MELO3C025637.2 Cucumis melo HOM05D005597 ORTHO05D007304 8.3e-204 714.1 435 79.5
Peaxi162Scf00069g02235 Petunia axillaris HOM05D005597 ORTHO05D007304 5.4e-203 711.4 437 77.1
Gohir.D13G153500 Gossypium hirsutum HOM05D005597 ORTHO05D007304 6.8e-198 694.5 407 80.8
Sc03g0010510 Simmondsia chinensis HOM05D005597 ORTHO05D007304 1.2e-186 657.1 435 76.1
Psat5g238320 Pisum sativum HOM05D005597 ORTHO05D007304 1.7e-180 636.7 428 75.0
Mapoly0059s0091 Marchantia polymorpha HOM05D005597 ORTHO05D007304 1.9e-176 623.2 549 57.0
Dinv18359 Davidia involucrata HOM05D005597 ORTHO05D007304 2.5e-176 622.9 372 87.1
Ah.06g185290 Amaranthus hybridus HOM05D005597 ORTHO05D007304 3.0e-169 599.4 438 70.3
Pp3c6_16240 Physcomitrium patens HOM05D005597 ORTHO05D007304 1.0e-153 547.7 559 52.1
AagrBONN_evm.TU.Sc2ySwM_228.833 Anthoceros agrestis HOM05D005597 ORTHO05D007304 7.1e-147 525.0 543 52.3
SMO143G0166 Selaginella moellendorffii HOM05D005597 ORTHO05D007304 2.3e-145 520.0 551 51.4
CBR_g38668 Chara braunii HOM05D005597 ORTHO05D007304 6.3e-127 458.8 578 42.9
SHI21382 Sapria himalayana HOM05D005597 ORTHO05D007304 8.5e-124 448.4 381 63.0
Nitab4.5_0001145g0050 Nicotiana tabacum HOM05D005597 ORTHO05D007304 1.7e-100 370.9 278 70.5
Nitab4.5_0000246g0240 Nicotiana tabacum HOM05D005597 ORTHO05D007304 2.7e-93 347.1 583 40.8
SHI21385 Sapria himalayana HOM05D000105 ORTHO05D000023 2.7e-93 347.1 220 72.3
Cpa.g.sc97.103 Carica papaya HOM05D005597 ORTHO05D007304 2.8e-90 337.0 213 79.3
Oeu059263.1 Olea europaea HOM05D005597 ORTHO05D007304 1.3e-84 318.2 218 72.9
SEGI_23731 Sequoiadendron giganteum HOM05D005597 ORTHO05D007304 7.5e-80 302.4 238 59.2
MCO07G083 Micromonas commoda HOM05D005597 ORTHO05D007304 1.6e-69 268.1 601 32.8
PRCOL_00005636 Prasinoderma coloniale HOM05D005597 ORTHO05D007304 1.7e-63 248.1 536 33.8
Cfa025275 Carpinus fangiana HOM05D005597 ORTHO05D028637 4.3e-59 233.4 457 35.9
Gohir.A07G160600 Gossypium hirsutum HOM05D005597 ORTHO05D007304 1.5e-56 224.9 148 75.0
Gohir.A04G098250 Gossypium hirsutum HOM05D005597 ORTHO05D007304 5.8e-56 223.0 151 72.2
Actinidia09803 Actinidia chinensis HOM05D005597 ORTHO05D007304 7.8e-53 212.6 126 78.6
Gohir.A03G066250 Gossypium hirsutum HOM05D005597 ORTHO05D007304 1.3e-52 211.8 139 74.8
Lsat_1_v5_gn_9_21740 Lactuca sativa HOM05D005597 ORTHO05D007174 4.6e-45 186.8 153 68.0
Atru.chr2.2170 Acer truncatum HOM05D005597 ORTHO05D007304 1.7e-44 184.9 95 84.2
COL.COLO4_17572 Corchorus olitorius HOM05D005597 ORTHO05D007304 5.8e-40 169.9 138 65.9
Actinidia24363 Actinidia chinensis HOM05D005597 ORTHO05D007304 2.3e-28 131.3 90 74.4
Nn1g04407 Nelumbo nucifera HOM05D005597 ORTHO05D007304 1.3e-20 105.5 71 69.0
MBI01_g45400_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D010488 7.7e-16 89.7 50 74.0
MBI01_g45631_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D010488 7.7e-16 89.7 63 60.3
Lsat_1_v5_gn_3_114580 Lactuca sativa HOM05D002100 ORTHO05D002310 9.4e-14 82.8 59 78.0
Potri.001G392050 Populus trichocarpa HOM05D005597 ORTHO05D007304 4.4e-11 73.9 47 72.3


User provided reference genes

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