Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14962 Davidia involucrata HOM05D006105 ORTHO05D006345 1.7e-224 782.3 388 100.0
Actinidia35226 Actinidia chinensis HOM05D006105 ORTHO05D006345 9.5e-119 431.0 378 66.1
Actinidia18787 Actinidia chinensis HOM05D006105 ORTHO05D006345 2.4e-114 416.4 380 63.7
CSS0026032 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 8.1e-110 401.4 382 61.5
CSS0022090 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 1.6e-105 387.1 402 59.7
Dinv18338 Davidia involucrata HOM05D006105 ORTHO05D006345 9.9e-100 367.9 306 68.3
Hma1.2p1_0688F.1_g203660 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 2.6e-92 343.2 355 60.0
Rhsim04G0024000 Rhododendron simsii HOM05D006105 ORTHO05D006345 4.2e-90 335.9 401 54.9
Hma1.2p1_0416F.1_g148610 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 9.6e-87 324.7 377 54.9
Oeu005394.1 Olea europaea HOM05D006105 ORTHO05D006345 1.1e-85 321.2 366 54.4
Actinidia07497 Actinidia chinensis HOM05D006105 ORTHO05D006345 9.3e-82 308.1 361 54.0
Lj8A152T79 Lonicera japonica HOM05D006105 ORTHO05D006345 4.6e-81 305.8 299 60.5
GSVIVG01014239001 Vitis vinifera HOM05D006105 ORTHO05D006345 3.9e-80 302.8 343 54.2
Rhsim06G0204700 Rhododendron simsii HOM05D006105 ORTHO05D006345 1.9e-79 300.4 389 52.2
MSTRG.14216 Avicennia marina HOM05D006105 ORTHO05D006345 1.8e-77 293.9 362 50.3
Prupe.4G171200 Prunus persica HOM05D006105 ORTHO05D006345 2.4e-77 293.5 407 51.1
PGSC0003DMG400015376 Solanum tuberosum HOM05D006105 ORTHO05D006345 1.3e-75 287.7 403 45.4
Nitab4.5_0005445g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 6.5e-75 285.4 360 51.1
QL08p027367 Quercus lobata HOM05D006105 ORTHO05D006345 1.1e-74 284.6 363 53.4
Sopen12g005900 Solanum pennellii HOM05D006105 ORTHO05D006345 2.7e-73 280.0 398 45.2
DCAR_019586 Daucus carota HOM05D006105 ORTHO05D006345 3.9e-72 276.2 386 49.7
Peaxi162Scf00000g02515 Petunia axillaris HOM05D006105 ORTHO05D006345 1.1e-69 268.1 362 48.3
Duzib213G0100 Durio zibethinus HOM05D006105 ORTHO05D006345 2.1e-65 253.8 398 47.5
FAN21G1974 Fragaria x ananassa HOM05D006105 ORTHO05D006345 3.6e-65 253.1 404 48.5
CiPaw.11G164300 Carya illinoinensis HOM05D006105 ORTHO05D006345 1.8e-64 250.8 387 48.8
Gohir.A08G021700 Gossypium hirsutum HOM05D006105 ORTHO05D006345 3.0e-64 250.0 383 47.0
MSTRG.14950 Avicennia marina HOM05D006105 ORTHO05D006345 6.7e-64 248.8 383 45.4
Thecc.07G103600 Theobroma cacao HOM05D006105 ORTHO05D006345 8.8e-64 248.4 389 47.6
COL.COLO4_17616 Corchorus olitorius HOM05D006105 ORTHO05D006345 4.3e-63 246.1 420 45.5
Sc03g0010360 Simmondsia chinensis HOM05D006105 ORTHO05D006345 2.8e-62 243.4 384 45.3
Gorai.004G029900 Gossypium raimondii HOM05D006105 ORTHO05D006345 6.3e-62 242.3 371 47.7
Haze_09360 Corylus avellana HOM05D006105 ORTHO05D006345 8.2e-62 241.9 402 46.3
Manes.03G103501 Manihot esculenta HOM05D006105 ORTHO05D006345 8.2e-62 241.9 397 45.1
RcHm_v2.0_Chr5g0031561 Rosa chinensis HOM05D006105 ORTHO05D006345 3.1e-61 240.0 400 46.8
Gohir.D08G032500 Gossypium hirsutum HOM05D006105 ORTHO05D006345 6.9e-61 238.8 372 47.6
Duzib268G0903 Durio zibethinus HOM05D006105 ORTHO05D006345 9.1e-61 238.4 423 46.3
FAN25G1303 Fragaria x ananassa HOM05D006105 ORTHO05D006345 9.1e-61 238.4 407 45.7
FvH4_3g18750 Fragaria vesca HOM05D006105 ORTHO05D006345 1.5e-60 237.7 406 45.8
FAN16G1829 Fragaria x ananassa HOM05D006105 ORTHO05D006345 1.0e-59 235.0 410 45.9
ECA234G3938 Erigeron canadensis HOM05D006105 ORTHO05D006345 1.7e-59 234.2 404 43.1
CiPaw.12G115300 Carya illinoinensis HOM05D006105 ORTHO05D006345 3.8e-59 233.0 382 47.4
Oeu059277.1 Olea europaea HOM05D006105 ORTHO05D006345 5.0e-59 232.6 354 45.2
Nitab4.5_0003077g0030 Nicotiana tabacum HOM05D006105 ORTHO05D006345 8.5e-59 231.9 389 41.9
FAN11G0448 Fragaria x ananassa HOM05D006105 ORTHO05D006345 1.1e-58 231.5 407 45.0
Ciclev10010617m.g Citrus clementina HOM05D006105 ORTHO05D006345 1.9e-58 230.7 393 45.3
HanXRQChr10g0304731 Helianthus annuus HOM05D006105 ORTHO05D006345 5.5e-58 229.2 412 43.0
Nn1g09023 Nelumbo nucifera HOM05D006105 ORTHO05D006345 3.6e-57 226.5 402 44.5
MD03G1238800 Malus domestica HOM05D006105 ORTHO05D006345 4.7e-57 226.1 402 44.8
DCAR_021012 Daucus carota HOM05D006105 ORTHO05D006345 5.7e-55 219.2 376 43.9
AUR62037870 Chenopodium quinoa HOM05D006105 ORTHO05D006345 9.7e-55 218.4 397 43.6
CSS0004572 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 1.3e-54 218.0 169 67.5
Cpa.g.sc131.73 Carica papaya HOM05D006105 ORTHO05D006345 1.7e-54 217.6 396 44.2
DCAR_013141 Daucus carota HOM05D006105 ORTHO05D006345 2.8e-54 216.9 388 39.2
Cfa019604 Carpinus fangiana HOM05D006105 ORTHO05D006345 4.8e-54 216.1 360 46.7
Nitab4.5_0003202g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 4.1e-53 213.0 385 42.1
Potri.001G375600 Populus trichocarpa HOM05D006105 ORTHO05D006345 7.0e-53 212.2 393 41.5
Atru.chr2.2260 Acer truncatum HOM05D006105 ORTHO05D006345 1.5e-50 204.5 387 43.9
TAR629G1657 Trochodendron aralioides HOM05D006105 ORTHO05D006345 1.9e-50 204.1 387 44.2
TWI38G0440 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 9.4e-50 201.8 402 41.8
PSO541G5705 Papaver somniferum HOM05D006105 ORTHO05D006345 1.8e-48 197.6 416 39.2
Phvul.005G068000 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 1.1e-47 194.9 391 40.9
TAR629G0423 Trochodendron aralioides HOM05D000109 ORTHO05D000965 2.6e-47 193.7 371 42.3
Peaxi162Scf00069g01930 Petunia axillaris HOM05D006105 ORTHO05D006345 3.3e-47 193.4 380 37.9
VMungo1080G1877 Vigna mungo HOM05D006105 ORTHO05D006345 3.3e-47 193.4 395 39.7
PSO675G6909 Papaver somniferum HOM05D006105 ORTHO05D006345 4.4e-47 193.0 419 38.9
AUR62019562 Chenopodium quinoa HOM05D006105 ORTHO05D006345 1.3e-46 191.4 376 40.7
Nitab4.5_0000246g0110 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.3e-46 191.4 373 39.4
Solyc12g014120.3 Solanum lycopersicum HOM05D006105 ORTHO05D006345 2.8e-46 190.3 266 45.9
Glyma.12G228100 Glycine max HOM05D006105 ORTHO05D006345 1.8e-45 187.6 347 43.8
Glyma.13G271900 Glycine max HOM05D006105 ORTHO05D006345 4.1e-45 186.4 394 41.4
Lsat_1_v5_gn_5_129201 Lactuca sativa HOM05D006105 ORTHO05D006345 2.2e-43 180.6 370 41.1
HanXRQChr12g0372831 Helianthus annuus HOM05D006105 ORTHO05D006345 5.0e-43 179.5 360 38.6
Gorai.002G064700 Gossypium raimondii HOM05D006105 ORTHO05D006345 1.9e-42 177.6 388 41.8
MD11G1258600 Malus domestica HOM05D006105 ORTHO05D006345 1.2e-41 174.9 409 38.9
DCAR_024487 Daucus carota HOM05D006105 ORTHO05D006345 6.1e-41 172.6 335 35.8
MELO3C025628.2 Cucumis melo HOM05D006105 ORTHO05D006345 1.0e-40 171.8 414 39.9
CsaV3_4G033280 Cucumis sativus L. HOM05D006105 ORTHO05D006345 1.0e-40 171.8 409 41.1
TWI39G0145 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 1.0e-40 171.8 400 38.5
Lalb_Chr25g0286021 Lupinus albus HOM05D006105 ORTHO05D006345 5.2e-40 169.5 367 39.2
MBI07_g17039_MAGBIO Magnolia biondii HOM05D006105 ORTHO05D006345 5.2e-40 169.5 347 41.8
Solyc07g062685.2 Solanum lycopersicum HOM05D006105 ORTHO05D006345 5.2e-40 169.5 372 38.2
MELO3C016090.2 Cucumis melo HOM05D006105 ORTHO05D006345 1.2e-39 168.3 360 40.3
Gohir.D01G045100 Gossypium hirsutum HOM05D006105 ORTHO05D006345 4.4e-39 166.4 381 39.6
Aqoxy1G02199 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 7.5e-39 165.6 393 38.4
Cc05_g11450 Coffea canephora HOM05D006105 ORTHO05D006345 7.5e-39 165.6 190 51.6
ClCG11G017660 Citrullus lanatus HOM05D006105 ORTHO05D006345 1.3e-38 164.9 411 39.9
CsaV3_4G008420 Cucumis sativus L. HOM05D006105 ORTHO05D006345 4.8e-38 162.9 360 39.4
Sopen07g030920 Solanum pennellii HOM05D006105 ORTHO05D006345 4.8e-38 162.9 372 37.1
ClCG07G009910 Citrullus lanatus HOM05D006105 ORTHO05D006345 1.1e-37 161.8 362 40.9
Oeu061338.1 Olea europaea HOM05D006105 ORTHO05D006345 5.4e-37 159.5 167 53.3
Sed0005720 Sechium edule HOM05D006105 ORTHO05D006345 7.0e-37 159.1 414 39.1
Lj3g0024128 Lotus japonicus HOM05D006105 ORTHO05D006345 7.7e-36 155.6 364 37.9
SGA_v2.0_scaffold73G24208 Striga asiatica HOM05D006105 ORTHO05D006345 3.8e-35 153.3 351 38.7
SalBow7G2198 Salvia bowleyana HOM05D006105 ORTHO05D006345 1.9e-34 151.0 394 36.8
SalBow7G3373 Salvia bowleyana HOM05D006105 ORTHO05D006345 1.9e-34 151.0 394 37.1
TPR.G9213 Trifolium pratense HOM05D006105 ORTHO05D006345 4.7e-33 146.4 413 37.0
Eucgr.F01202 Eucalyptus grandis HOM05D006105 ORTHO05D006345 1.0e-32 145.2 311 40.8
Sabra16G0247400 Salix brachista HOM05D006105 ORTHO05D006345 8.8e-32 142.1 396 37.4
Sed0015488 Sechium edule HOM05D006105 ORTHO05D006345 2.8e-30 137.1 401 36.4
PGSC0003DMG400021273 Solanum tuberosum HOM05D006105 ORTHO05D006345 1.8e-29 134.4 363 33.3
Ca_04016_v3 Cicer arietinum L. HOM05D006105 ORTHO05D006345 7.0e-29 132.5 394 35.8
Sed0026435 Sechium edule HOM05D006105 ORTHO05D006345 1.2e-28 131.7 366 38.5
SalBow8G2605 Salvia bowleyana HOM05D006105 ORTHO05D006345 4.5e-28 129.8 349 35.5
Glyma.06G232600 Glycine max HOM05D006105 ORTHO05D006345 1.0e-27 128.6 339 36.3
Medtr2g078220 Medicago truncatula HOM05D006105 ORTHO05D006345 1.0e-27 128.6 378 34.7
SGA_v2.0_scaffold34G13768 Striga asiatica HOM05D006105 ORTHO05D006345 5.0e-27 126.3 404 32.9
Nn1g04330 Nelumbo nucifera HOM05D006105 ORTHO05D006345 6.6e-27 125.9 262 42.7
arahy.Tifrunner.gnm1.ann1.LEI4AX Arachis hypogaea HOM05D006105 ORTHO05D006345 4.2e-26 123.2 374 34.2
arahy.Tifrunner.gnm1.ann1.KE6FEG Arachis hypogaea HOM05D006105 ORTHO05D006345 9.5e-26 122.1 367 35.7
Dinv17387 Davidia involucrata HOM05D006105 ORTHO05D006345 1.2e-25 121.7 390 32.3
Gohir.A01G059000 Gossypium hirsutum HOM05D006105 ORTHO05D006345 4.7e-25 119.8 362 35.6
arahy.Tifrunner.gnm1.ann1.TTJ9YL Arachis hypogaea HOM05D006105 ORTHO05D006345 2.2e-22 110.9 369 33.6
TAR627G0886 Trochodendron aralioides HOM05D000157 ORTHO05D006345 8.3e-22 109.0 248 38.3
Gohir.A13G148200 Gossypium hirsutum HOM05D006105 ORTHO05D006345 2.4e-21 107.5 316 36.4
Psat5g240600 Pisum sativum HOM05D006105 ORTHO05D006345 5.4e-21 106.3 317 36.6
Migut.M00751 Erythranthe guttata HOM05D006105 ORTHO05D006345 4.6e-20 103.2 337 34.1
ECA236G3415 Erigeron canadensis HOM05D006105 ORTHO05D006345 1.0e-19 102.1 220 36.8
PGSC0003DMG400012397 Solanum tuberosum HOM05D006105 ORTHO05D006345 6.6e-19 99.4 155 38.7
Aqoxy4G00493 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 1.5e-18 98.2 418 30.4
Sopen10g003350 Solanum pennellii HOM05D016660 ORTHO05D006345 7.3e-18 95.9 162 38.9
PGR083G1480 Punica granatum HOM05D006105 ORTHO05D006345 9.5e-18 95.5 374 30.5
Phvul.011G157100 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 2.1e-17 94.4 336 33.0
Oeu051102.1 Olea europaea HOM05D006105 ORTHO05D006345 6.8e-16 89.4 127 41.7
Manes.17G052800 Manihot esculenta HOM05D013066 ORTHO05D010890 1.5e-15 88.2 368 29.3
VMungo1127G1756 Vigna mungo HOM05D006105 ORTHO05D006345 1.4e-13 81.6 281 33.1
Lsat_1_v5_gn_7_103061 Lactuca sativa HOM05D006105 ORTHO05D006345 2.0e-12 77.8 339 31.0
Glyma.06G232800 Glycine max HOM05D006105 ORTHO05D006345 6.0e-12 76.3 466 28.1
Manes.16G035200 Manihot esculenta HOM05D013066 ORTHO05D006345 7.8e-12 75.9 380 27.9
Thecc.06G176400 Theobroma cacao HOM05D013066 ORTHO05D010890 7.8e-12 75.9 415 28.9
GSVIVG01021165001 Vitis vinifera HOM05D006105 ORTHO05D006345 9.5e-10 68.9 370 29.2
Solyc10g007156.2 Solanum lycopersicum HOM05D016660 ORTHO05D006345 1.2e-09 68.6 139 34.5
Migut.H01972 Erythranthe guttata HOM05D006105 ORTHO05D006345 6.2e-09 66.2 144 35.4
CANSAT35G1552 Cannabis sativa HOM05D006105 ORTHO05D006345 1.1e-08 65.5 392 29.1
MBI06_g46086_MAGBIO Magnolia biondii HOM05D026394 ORTHO05D030051 2.3e-08 64.3 112 48.2
Potri.004G052900 Populus trichocarpa HOM05D058718 ORTHO05D010890 2.0e-07 61.2 385 28.1
Gohir.D05G159900 Gossypium hirsutum HOM05D013066 ORTHO05D010890 3.4e-07 60.5 347 30.3
MBI06_g40465_MAGBIO Magnolia biondii HOM05D026394 ORTHO05D030051 3.4e-07 60.5 114 48.2
Gohir.A05G157001 Gossypium hirsutum HOM05D013066 ORTHO05D010890 7.5e-07 59.3 365 29.6
MBI06_g25724_MAGBIO Magnolia biondii HOM05D026394 ORTHO05D030051 9.8e-07 58.9 66 60.6
Gorai.009G164800 Gossypium raimondii HOM05D013066 ORTHO05D010890 1.3e-06 58.5 353 29.7


User provided reference genes

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