Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 3.2e-291 1004.2 462 100.0
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 2.1e-261 905.2 453 90.3
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 5.1e-260 900.6 461 88.1
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 1.1e-259 899.4 449 91.3
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 4.4e-256 887.5 475 85.3
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 1.9e-254 882.1 450 88.4
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 9.2e-254 879.8 450 88.9
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 1.6e-253 879.0 449 88.2
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 6.0e-253 877.1 455 86.6
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 6.0e-253 877.1 448 88.2
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 7.8e-253 876.7 455 86.4
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 1.0e-252 876.3 455 86.4
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 1.3e-252 875.9 445 87.9
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 2.3e-252 875.2 462 85.1
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 1.5e-251 872.5 454 86.8
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 2.5e-251 871.7 449 87.1
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 1.2e-250 869.4 449 87.1
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 2.8e-250 868.2 472 84.7
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 3.6e-250 867.8 449 86.6
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 1.5e-248 862.4 454 85.9
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 5.8e-248 860.5 450 86.0
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 1.7e-247 859.0 435 89.2
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 2.9e-247 858.2 449 85.5
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 3.8e-247 857.8 446 87.0
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 8.4e-247 856.7 494 80.2
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 8.4e-247 856.7 456 84.4
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 8.4e-247 856.7 459 85.4
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 1.1e-246 856.3 453 84.8
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 1.9e-246 855.5 444 86.5
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 1.9e-246 855.5 457 83.8
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 2.1e-245 852.0 450 84.4
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 2.7e-245 851.7 438 87.9
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 3.5e-245 851.3 486 80.5
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 3.5e-245 851.3 486 80.5
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 6.0e-245 850.5 463 82.5
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.0e-244 849.7 447 84.3
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 6.6e-244 847.0 446 85.0
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 1.1e-243 846.3 456 84.0
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 1.1e-243 846.3 441 85.7
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.9e-243 845.5 455 83.1
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 4.3e-243 844.3 465 82.4
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 4.3e-243 844.3 446 85.2
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 5.6e-243 844.0 452 84.5
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 7.3e-243 843.6 438 86.8
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 9.6e-243 843.2 456 84.2
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 2.8e-242 841.6 460 82.8
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 4.8e-242 840.9 445 85.4
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 6.2e-242 840.5 460 83.0
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 4.0e-241 837.8 444 85.6
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 6.9e-241 837.0 442 85.5
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 2.6e-240 835.1 440 85.2
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 4.2e-238 827.8 445 83.8
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 4.2e-238 827.8 441 84.8
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 1.2e-237 826.2 445 84.9
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 1.2e-237 826.2 445 84.9
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 2.1e-237 825.5 484 77.9
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 2.7e-237 825.1 443 83.5
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 7.9e-237 823.5 479 79.7
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 6.6e-236 820.5 435 85.3
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 3.3e-235 818.1 449 81.1
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 4.3e-235 817.8 443 83.3
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 6.2e-234 813.9 451 80.5
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 1.1e-233 813.1 432 85.0
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 5.3e-233 810.8 432 83.6
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 6.9e-233 810.4 449 81.5
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 9.0e-233 810.1 431 85.4
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 1.2e-232 809.7 448 81.5
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 1.5e-232 809.3 436 84.2
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 2.0e-232 808.9 445 82.2
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 3.4e-232 808.1 432 83.8
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 3.4e-232 808.1 432 83.8
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 5.8e-232 807.4 445 81.6
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 5.8e-232 807.4 445 81.6
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 7.6e-232 807.0 453 79.5
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 2.2e-231 805.4 445 82.0
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 2.9e-231 805.1 449 81.1
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 4.9e-231 804.3 452 80.3
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 6.4e-231 803.9 448 81.2
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 1.4e-230 802.7 448 81.0
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 5.4e-230 800.8 432 82.9
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 7.1e-230 800.4 432 83.1
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 6.7e-228 793.9 432 82.2
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 1.3e-226 789.6 452 79.4
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 2.1e-226 788.9 439 79.0
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 4.8e-226 787.7 441 81.0
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 1.8e-225 785.8 457 77.5
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 3.8e-223 778.1 486 73.9
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 8.2e-218 760.4 443 77.9
Nn1g04303 Nelumbo nucifera HOM05D006017 ORTHO05D007821 4.1e-217 758.1 394 86.8
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 2.6e-216 755.4 436 78.0
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 8.4e-215 750.4 449 75.7
Ciclev10008509m.g Citrus clementina HOM05D006017 ORTHO05D007821 1.1e-214 750.0 389 87.1
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 6.7e-212 740.7 439 76.5
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 2.5e-203 712.2 397 79.8
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 1.2e-200 703.4 444 71.8
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 8.5e-199 697.2 448 73.2
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 1.7e-194 682.9 435 70.8
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 1.1e-193 680.2 422 75.6
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 2.0e-192 676.0 449 70.6
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 4.5e-192 674.9 421 71.5
Hma1.2p1_0416F.1_g148580 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 1.3e-178 630.2 308 92.2
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 3.7e-178 628.6 435 65.7
FvH4_3g19020 Fragaria vesca HOM05D006017 ORTHO05D007821 2.1e-173 612.8 335 81.2
SalBow8G4076 Salvia bowleyana HOM05D006017 ORTHO05D007821 9.2e-169 597.4 308 85.4
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 3.0e-164 582.4 447 62.4
TPR.G22540 Trifolium pratense HOM05D006017 ORTHO05D007821 4.0e-164 582.0 376 73.9
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 1.8e-161 573.2 454 61.0
MD03G1237500 Malus domestica HOM05D006017 ORTHO05D007821 1.2e-157 560.5 295 83.7
Glyma.06G234200 Glycine max HOM05D006017 ORTHO05D007821 1.5e-139 500.4 276 81.2
CSS0003418 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 4.5e-83 312.8 196 76.0
MD03G1237300 Malus domestica HOM05D006017 ORTHO05D007821 3.3e-78 296.6 159 81.8
SEGI_01915 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 6.3e-77 292.4 184 73.4
Rhsim07G0153900 Rhododendron simsii HOM05D006017 ORTHO05D000252 3.2e-73 280.0 233 58.4
FAN25G2436 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.7e-69 267.7 132 87.9
Oeu061326.1 Olea europaea HOM05D006017 ORTHO05D007821 8.2e-69 265.4 136 88.2
BcaC04g20394 Brassica carinata HOM05D006017 ORTHO05D007821 1.8e-68 264.2 412 42.0
Glyma.06G234050 Glycine max HOM05D006017 ORTHO05D007821 9.1e-68 261.9 133 87.2
TAR436G0001 Trochodendron aralioides HOM05D006017 ORTHO05D007821 8.5e-66 255.4 137 83.2
C09p44170 Brassica napus HOM05D006017 ORTHO05D017343 3.2e-65 253.4 216 61.1
Nitab4.5_0004022g0010 Nicotiana tabacum HOM05D006017 ORTHO05D007821 2.1e-64 250.8 120 92.5
CSS0021316 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 1.8e-52 211.1 124 75.8
TWI38G1497 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 3.3e-49 200.3 119 78.2
A10p11370 Brassica napus HOM05D006017 ORTHO05D007821 8.0e-48 195.7 249 47.4
SEGI_25954 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 3.3e-33 147.1 86 74.4
FAN25G2983 Fragaria x ananassa HOM05D006017 ORTHO05D007821 4.6e-27 126.7 105 57.1
SEGI_23248 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 2.8e-24 117.5 70 71.4
TWI38G0821 Tripterygium wilfordii HOM05D006017 ORTHO05D413584 1.8e-23 114.8 62 80.6
BolC9t57289H Brassica oleracea HOM05D006017 ORTHO05D104628 5.2e-23 113.2 181 39.2
CSS0031230 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 1.5e-22 111.7 108 52.8
arahy.Tifrunner.gnm1.ann1.EZ2Q4B Arachis hypogaea HOM05D006004 ORTHO05D006976 1.3e-21 108.6 61 78.7
BraA10t43231Z Brassica rapa HOM05D006017 ORTHO05D017343 1.6e-16 91.7 63 68.3
HPP92_003866 Vanilla planifolia HOM05D006017 ORTHO05D007821 4.6e-11 73.6 59 57.6
Mapoly0432s0001 Marchantia polymorpha HOM05D019566 ORTHO05D017343 8.1e-08 62.8 43 62.8


User provided reference genes

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