Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14935 Davidia involucrata HOM05D005295 ORTHO05D005962 1.2e-129 466.5 235 100.0
Lj1C840T8 Lonicera japonica HOM05D005295 ORTHO05D005962 1.2e-52 210.7 158 69.0
CSS0001236 Camellia sinensis var. sinensis HOM05D005295 ORTHO05D005962 1.6e-47 193.7 133 78.9
Nitab4.5_0000332g0010 Nicotiana tabacum HOM05D005295 ORTHO05D005962 5.7e-42 175.3 142 67.6
Rhsim06G0201600 Rhododendron simsii HOM05D005295 ORTHO05D005962 9.7e-42 174.5 132 75.0
GSVIVG01014296001 Vitis vinifera HOM05D005295 ORTHO05D005962 9.7e-42 174.5 133 66.9
Actinidia12794 Actinidia chinensis HOM05D005295 ORTHO05D005962 2.2e-41 173.3 132 68.9
Peaxi162Scf00000g00314 Petunia axillaris HOM05D005295 ORTHO05D005962 2.8e-41 172.9 157 63.1
CANSAT56G1083 Cannabis sativa HOM05D005295 ORTHO05D005962 8.2e-41 171.4 133 65.4
Hma1.2p1_0387F.1_g141920 Hydrangea macrophylla HOM05D005295 ORTHO05D005962 1.1e-40 171.0 133 70.7
Solyc12g013910.2 Solanum lycopersicum HOM05D005295 ORTHO05D005962 5.3e-40 168.7 168 61.3
PGSC0003DMG400015366 Solanum tuberosum HOM05D005295 ORTHO05D005962 7.0e-40 168.3 168 60.7
Sopen12g005670 Solanum pennellii HOM05D005295 ORTHO05D005962 9.1e-40 167.9 134 70.9
Lalb_Chr20g0109501 Lupinus albus HOM05D005295 ORTHO05D005962 3.5e-39 166.0 136 65.4
MSTRG.6822 Avicennia marina HOM05D005295 ORTHO05D005962 4.5e-39 165.6 136 69.1
Oeu019302.2 Olea europaea HOM05D005295 ORTHO05D005962 7.7e-39 164.9 136 65.4
CsaV3_4G033520 Cucumis sativus L. HOM05D005295 ORTHO05D005962 3.8e-38 162.5 132 65.2
Lj8A154T78 Lonicera japonica HOM05D005295 ORTHO05D005962 3.8e-38 162.5 133 69.2
Cc05_g11790 Coffea canephora HOM05D005295 ORTHO05D005962 5.0e-38 162.2 135 68.1
MELO3C025603.2 Cucumis melo HOM05D005295 ORTHO05D005962 5.0e-38 162.2 132 63.6
Migut.M00784 Erythranthe guttata HOM05D005295 ORTHO05D005962 3.2e-37 159.5 133 64.7
Lsat_1_v5_gn_5_128440 Lactuca sativa HOM05D005295 ORTHO05D005962 1.2e-36 157.5 135 60.0
CiPaw.11G171800 Carya illinoinensis HOM05D005295 ORTHO05D005962 2.1e-36 156.8 133 64.7
ClCG11G017890 Citrullus lanatus HOM05D005295 ORTHO05D005962 2.1e-36 156.8 132 62.9
Aqoxy1G02337 Aquilegia oxysepala HOM05D005295 ORTHO05D005962 2.7e-36 156.4 134 66.4
Dinv12314 Davidia involucrata HOM05D005295 ORTHO05D005962 2.7e-36 156.4 131 68.7
Sed0001385 Sechium edule HOM05D005295 ORTHO05D005962 4.7e-36 155.6 132 60.6
Nn1g04175 Nelumbo nucifera HOM05D005295 ORTHO05D005962 8.0e-36 154.8 137 66.4
Eucgr.F01198 Eucalyptus grandis HOM05D005295 ORTHO05D005962 1.4e-35 154.1 139 60.4
Eucgr.F01159 Eucalyptus grandis HOM05D005295 ORTHO05D005962 2.3e-35 153.3 133 66.9
PSO675G2991 Papaver somniferum HOM05D005295 ORTHO05D005962 4.0e-35 152.5 144 61.8
PGR083G0729 Punica granatum HOM05D005295 ORTHO05D005962 4.0e-35 152.5 133 67.7
Cpa.g.sc622.2 Carica papaya HOM05D005295 ORTHO05D005962 2.0e-34 150.2 133 65.4
Haze_09452 Corylus avellana HOM05D005295 ORTHO05D005962 3.4e-34 149.4 133 69.2
SalBow8G4458 Salvia bowleyana HOM05D005295 ORTHO05D005962 3.4e-34 149.4 136 64.0
Cfa020562 Carpinus fangiana HOM05D005295 ORTHO05D005962 5.7e-34 148.7 157 60.5
DCAR_013119 Daucus carota HOM05D005295 ORTHO05D005962 9.8e-34 147.9 133 59.4
Manes.03G106500 Manihot esculenta HOM05D005295 ORTHO05D005962 9.8e-34 147.9 133 65.4
SGA_v2.0_scaffold34G13800 Striga asiatica HOM05D005295 ORTHO05D005962 1.7e-33 147.1 133 59.4
Thecc.07G095500 Theobroma cacao HOM05D005295 ORTHO05D005962 1.7e-33 147.1 133 60.2
SGA_v2.0_scaffold73G24237 Striga asiatica HOM05D005295 ORTHO05D005962 2.2e-33 146.7 136 61.0
Lj3g0021836 Lotus japonicus HOM05D005295 ORTHO05D005962 3.7e-33 146.0 133 61.7
CAN.G213.18 Capsicum annuum HOM05D005295 ORTHO05D005962 4.8e-33 145.6 137 61.3
HanXRQChr12g0361161 Helianthus annuus HOM05D005295 ORTHO05D005962 4.8e-33 145.6 133 61.7
TWI38G0013 Tripterygium wilfordii HOM05D005295 ORTHO05D005962 1.1e-32 144.4 136 61.0
QL08p022700 Quercus lobata HOM05D005295 ORTHO05D005962 2.4e-32 143.3 133 63.9
arahy.Tifrunner.gnm1.ann1.3CLR9I Arachis hypogaea HOM05D005295 ORTHO05D005962 3.1e-32 142.9 133 58.6
Medtr2g078650 Medicago truncatula HOM05D005295 ORTHO05D005962 3.1e-32 142.9 133 60.9
Ah.06g184530 Amaranthus hybridus HOM05D005295 ORTHO05D005962 4.1e-32 142.5 145 56.6
Sabra16G0260000 Salix brachista HOM05D005295 ORTHO05D005962 5.4e-32 142.1 133 60.9
Aa31LG5G9970 Aethionema arabicum HOM05D005295 ORTHO05D005962 7.0e-32 141.7 133 57.9
arahy.Tifrunner.gnm1.ann1.B1NQ7W Arachis hypogaea HOM05D005295 ORTHO05D005962 7.0e-32 141.7 133 57.9
ECA234G3281 Erigeron canadensis HOM05D005295 ORTHO05D005962 7.0e-32 141.7 132 61.4
VMungo1080G0752 Vigna mungo HOM05D005295 ORTHO05D005962 7.0e-32 141.7 133 60.9
MBI02_g22345_MAGBIO Magnolia biondii HOM05D005295 ORTHO05D005962 9.1e-32 141.4 133 60.2
MD03G1231400 Malus domestica HOM05D005295 ORTHO05D005962 9.1e-32 141.4 133 57.1
Prupe.4G176600 Prunus persica HOM05D005295 ORTHO05D005962 3.5e-31 139.4 133 57.9
Glyma.13G273800 Glycine max HOM05D005295 ORTHO05D005962 4.5e-31 139.0 133 59.4
Thhalv10026112m.g Eutrema salsugineum HOM05D005295 ORTHO05D005962 5.9e-31 138.7 133 60.2
COL.COLO4_36711 Corchorus olitorius HOM05D005295 ORTHO05D005962 7.7e-31 138.3 133 56.4
BcaNung06687 Brassica carinata HOM05D005295 ORTHO05D005962 1.0e-30 137.9 133 57.9
C01p23710 Brassica napus HOM05D005295 ORTHO05D005962 1.0e-30 137.9 133 57.9
CARHR235220 Cardamine hirsuta HOM05D005295 ORTHO05D005962 1.0e-30 137.9 137 56.9
unitig_0.g1149 Utricularia gibba HOM05D005295 ORTHO05D005962 2.2e-30 136.7 142 57.0
BolC1t02323H Brassica oleracea HOM05D005295 ORTHO05D005962 3.8e-30 136.0 133 57.1
Carub.0007s1331 Capsella rubella HOM05D005295 ORTHO05D005962 3.8e-30 136.0 133 59.4
THA.LOC104811877 Tarenaya hassleriana HOM05D005295 ORTHO05D005962 3.8e-30 136.0 133 53.4
CDE05G1939 Ceratophyllum demersum HOM05D005295 ORTHO05D005962 5.0e-30 135.6 168 50.0
Psat0s1402g0040 Pisum sativum HOM05D005295 ORTHO05D005962 5.0e-30 135.6 133 57.9
Potri.001G396900 Populus trichocarpa HOM05D005295 ORTHO05D005962 5.0e-30 135.6 133 60.9
AL7G25230 Arabidopsis lyrata HOM05D005295 ORTHO05D005962 6.5e-30 135.2 133 59.4
Atru.chr2.2424 Acer truncatum HOM05D005295 ORTHO05D005962 1.1e-29 134.4 232 42.7
Sp7g25480 Schrenkiella parvula HOM05D005295 ORTHO05D005962 1.5e-29 134.0 133 58.6
AT4G27540 Arabidopsis thaliana HOM05D005295 ORTHO05D005962 1.9e-29 133.7 133 59.4
Gohir.A04G035200 Gossypium hirsutum HOM05D005295 ORTHO05D005962 1.9e-29 133.7 133 56.4
BcaNung06688 Brassica carinata HOM05D005295 ORTHO05D005962 2.5e-29 133.3 134 57.5
CDE05G3097 Ceratophyllum demersum HOM05D006331 ORTHO05D008043 4.2e-29 132.5 132 59.1
TWI39G0015 Tripterygium wilfordii HOM05D005295 ORTHO05D005962 4.2e-29 132.5 133 57.9
Gohir.D05G348200 Gossypium hirsutum HOM05D005295 ORTHO05D005962 5.5e-29 132.1 133 56.4
Gorai.009G376000 Gossypium raimondii HOM05D005295 ORTHO05D005962 5.5e-29 132.1 133 56.4
Phvul.005G075000 Phaseolus vulgaris HOM05D005295 ORTHO05D005962 5.5e-29 132.1 133 57.1
A01p18770 Brassica napus HOM05D005295 ORTHO05D005962 7.2e-29 131.7 134 57.5
Potri.011G116200 Populus trichocarpa HOM05D005295 ORTHO05D005962 2.7e-28 129.8 133 59.4
HPP92_003730 Vanilla planifolia HOM05D005295 ORTHO05D005962 2.7e-28 129.8 131 53.4
Sc16g0007150 Simmondsia chinensis HOM05D005295 ORTHO05D005962 3.6e-28 129.4 140 55.7
Ciclev10009383m.g Citrus clementina HOM05D005295 ORTHO05D005962 4.7e-28 129.0 132 59.8
Duzib213G0204 Durio zibethinus HOM05D005295 ORTHO05D005962 4.7e-28 129.0 133 57.9
Ca_03531_v3 Cicer arietinum L. HOM05D005295 ORTHO05D005962 6.1e-28 128.6 133 58.6
BraA01t01821Z Brassica rapa HOM05D005295 ORTHO05D005962 8.0e-28 128.3 134 56.7
EL10Ac4g08225 Beta vulgaris HOM05D005295 ORTHO05D005962 1.4e-27 127.5 140 57.1
Ciclev10009380m.g Citrus clementina HOM05D005295 ORTHO05D005962 4.0e-27 125.9 132 59.1
Sabra11G0101800 Salix brachista HOM05D005295 ORTHO05D005962 2.0e-26 123.6 133 57.1
MD06G1175000 Malus domestica HOM05D005295 ORTHO05D005962 4.4e-26 122.5 123 56.9
Hund22882 Selenicereus undatus HOM05D005295 ORTHO05D005962 3.7e-25 119.4 145 54.5
FAN11G0135 Fragaria x ananassa HOM05D005295 ORTHO05D005962 1.8e-24 117.1 133 57.1
AUR62019458 Chenopodium quinoa HOM05D005295 ORTHO05D005962 3.1e-24 116.3 147 53.1
Ciclev10010240m.g Citrus clementina HOM05D005295 ORTHO05D005962 2.7e-23 113.2 132 55.3
FvH4_3g19520 Fragaria vesca HOM05D005295 ORTHO05D005962 3.5e-23 112.8 133 54.9
FAN21G0215 Fragaria x ananassa HOM05D005295 ORTHO05D005962 3.5e-23 112.8 133 54.9
RcHm_v2.0_Chr5g0032761 Rosa chinensis HOM05D005295 ORTHO05D005962 4.5e-23 112.5 133 53.4
AUR62036172 Chenopodium quinoa HOM05D005295 ORTHO05D005962 5.9e-23 112.1 146 52.1
TPR.G7946 Trifolium pratense HOM05D005295 ORTHO05D005962 7.7e-23 111.7 133 50.4
FAN25G2205 Fragaria x ananassa HOM05D005295 ORTHO05D005962 2.9e-22 109.8 133 51.9
Zm00001eb231100 Zea mays HOM05D005295 ORTHO05D005962 5.6e-21 105.5 133 47.4
vmacro11885 Vaccinium macrocarpon HOM05D005295 ORTHO05D005962 4.7e-20 102.4 91 63.7
BolC2t07912H Brassica oleracea HOM05D005295 ORTHO05D005962 1.0e-19 101.3 133 46.6
BcaC03g14369 Brassica carinata HOM05D005295 ORTHO05D005962 1.8e-19 100.5 133 46.6
BcaB05g22086 Brassica carinata HOM05D005295 ORTHO05D005962 2.3e-19 100.1 137 45.3
BcaC03g14372 Brassica carinata HOM05D005295 ORTHO05D005962 3.7e-17 92.8 133 44.4
BolC2t07916H Brassica oleracea HOM05D005295 ORTHO05D005962 3.7e-17 92.8 133 44.4
C02p17850 Brassica napus HOM05D005295 ORTHO05D005962 1.4e-16 90.9 133 43.6
ATR0150G019 Amborella trichopoda HOM05D005295 ORTHO05D005962 1.2e-15 87.8 137 42.3
Os09g0134400 Oryza sativa ssp. japonica HOM05D005295 ORTHO05D005962 2.0e-15 87.0 138 42.0
BcaB06g26783 Brassica carinata HOM05D005295 ORTHO05D005962 1.9e-13 80.5 68 60.3
C02p17830 Brassica napus HOM05D005295 ORTHO05D005962 1.4e-11 74.3 75 54.7
Cc11_g09910 Coffea canephora HOM05D005295 ORTHO05D005962 4.0e-11 72.8 38 89.5
Mapoly0124s0020 Marchantia polymorpha HOM05D005295 ORTHO05D005962 2.0e-10 70.5 137 36.5
Thhalv10015755m.g Eutrema salsugineum HOM05D005295 ORTHO05D005962 5.8e-10 68.9 145 39.3
SEGI_06803 Sequoiadendron giganteum HOM05D005295 ORTHO05D005962 5.8e-10 68.9 133 36.1
A02p10710 Brassica napus HOM05D005295 ORTHO05D005962 9.8e-10 68.2 56 57.1
BraA02t06134Z Brassica rapa HOM05D005295 ORTHO05D005962 9.8e-10 68.2 56 57.1
Pp3c9_10810 Physcomitrium patens HOM05D005295 ORTHO05D005962 6.4e-09 65.5 137 33.6
SMO285G0011 Selaginella moellendorffii HOM05D005295 ORTHO05D005962 1.4e-08 64.3 135 31.9
Nitab4.5_0003378g0020 Nicotiana tabacum HOM05D005295 ORTHO05D005962 7.0e-08 62.0 61 45.9
BcaB05g22090 Brassica carinata HOM05D005295 ORTHO05D005962 9.2e-08 61.6 74 45.9
Duzib268G1416 Durio zibethinus HOM05D005295 ORTHO05D005962 2.0e-07 60.5 51 58.8
AL1G49440 Arabidopsis lyrata HOM05D021473 ORTHO05D005962 2.7e-07 60.1 35 80.0
AL4G33490 Arabidopsis lyrata HOM05D021473 ORTHO05D005962 2.7e-07 60.1 35 80.0
AL6G44190 Arabidopsis lyrata HOM05D021473 ORTHO05D005962 2.7e-07 60.1 35 80.0
AL6G51010 Arabidopsis lyrata HOM05D021473 ORTHO05D005962 2.7e-07 60.1 35 80.0
AL7G20040 Arabidopsis lyrata HOM05D021473 ORTHO05D005962 2.7e-07 60.1 35 80.0
AL3G43900 Arabidopsis lyrata HOM05D021473 ORTHO05D005962 7.8e-07 58.5 35 77.1
BcaB05g22088 Brassica carinata HOM05D005295 ORTHO05D005962 8.6e-06 55.1 99 40.4
Carub.0001s2750 Capsella rubella HOM05D005295 ORTHO05D005962 8.6e-06 55.1 47 59.6


User provided reference genes

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