Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14922 Davidia involucrata HOM05D003240 ORTHO05D009426 5.1e-63 244.6 158 100.0
Hma1.2p1_0898F.1_g234470 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 3.0e-31 139.0 114 63.2
Nn1g06519 Nelumbo nucifera HOM05D003240 ORTHO05D009426 2.2e-29 132.9 117 56.4
Eucgr.F01147 Eucalyptus grandis HOM05D003240 ORTHO05D009426 2.9e-29 132.5 116 61.2
TWI38G1889 Tripterygium wilfordii HOM05D003240 ORTHO05D009426 1.4e-28 130.2 115 57.4
Hma1.2p1_0458F.1_g157060 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 1.8e-28 129.8 112 62.5
Manes.15G087500 Manihot esculenta HOM05D003240 ORTHO05D009426 3.2e-28 129.0 111 58.6
Oeu019313.1 Olea europaea HOM05D003240 ORTHO05D009426 3.2e-28 129.0 112 58.0
Haze_09435 Corylus avellana HOM05D003240 ORTHO05D009426 1.6e-27 126.7 112 61.6
Nn4g25258 Nelumbo nucifera HOM05D003240 ORTHO05D009426 3.5e-27 125.6 105 55.2
Prupe.4G180300 Prunus persica HOM05D003240 ORTHO05D009426 5.9e-27 124.8 108 60.2
RcHm_v2.0_Chr5g0033251 Rosa chinensis HOM05D003240 ORTHO05D009426 2.3e-26 122.9 111 56.8
Potri.011G118600 Populus trichocarpa HOM05D003240 ORTHO05D009426 3.0e-26 122.5 113 58.4
DCAR_017136 Daucus carota HOM05D003240 ORTHO05D009426 3.9e-26 122.1 109 59.6
CiPaw.12G118800 Carya illinoinensis HOM05D003240 ORTHO05D009426 8.6e-26 120.9 121 57.0
Thecc.07G091300 Theobroma cacao HOM05D003240 ORTHO05D009426 1.1e-25 120.6 125 54.4
TAR627G0347 Trochodendron aralioides HOM05D003240 ORTHO05D009426 1.1e-25 120.6 79 65.8
MBI06_g23076_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 1.5e-25 120.2 112 57.1
Potri.001G399200 Populus trichocarpa HOM05D003240 ORTHO05D009426 2.5e-25 119.4 113 56.6
DCAR_013111 Daucus carota HOM05D003240 ORTHO05D009426 5.6e-25 118.2 78 70.5
Cfa020576 Carpinus fangiana HOM05D003240 ORTHO05D009426 1.6e-24 116.7 104 61.5
Haze_09433 Corylus avellana HOM05D003240 ORTHO05D009426 1.6e-24 116.7 108 54.6
Cc05_g11970 Coffea canephora HOM05D003240 ORTHO05D009426 3.6e-24 115.5 116 54.3
Hma1.2p1_0458F.1_g157080 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 3.6e-24 115.5 114 57.9
Prupe.4G180400 Prunus persica HOM05D003240 ORTHO05D009426 1.0e-23 114.0 108 56.5
FAN21G1097 Fragaria x ananassa HOM05D003240 ORTHO05D009426 1.4e-23 113.6 109 56.9
Gohir.D05G352500 Gossypium hirsutum HOM05D003240 ORTHO05D009426 1.4e-23 113.6 110 51.8
Gorai.009G384600 Gossypium raimondii HOM05D003240 ORTHO05D009426 1.4e-23 113.6 110 51.8
FAN25G3490 Fragaria x ananassa HOM05D003240 ORTHO05D009426 1.8e-23 113.2 109 55.0
Gohir.A04G032100 Gossypium hirsutum HOM05D003240 ORTHO05D009426 1.8e-23 113.2 110 51.8
FvH4_3g19820 Fragaria vesca HOM05D003240 ORTHO05D009426 2.3e-23 112.8 106 56.6
Sabra16G0261800 Salix brachista HOM05D003240 ORTHO05D009426 2.3e-23 112.8 109 56.9
CSS0038111 Camellia sinensis var. sinensis HOM05D003240 ORTHO05D009426 3.1e-23 112.5 114 58.8
CSS0044584 Camellia sinensis var. sinensis HOM05D003240 ORTHO05D009426 4.0e-23 112.1 114 58.8
Aqoxy1G02389 Aquilegia oxysepala HOM05D003240 ORTHO05D009426 8.9e-23 110.9 116 51.7
FAN16G0971 Fragaria x ananassa HOM05D003240 ORTHO05D009426 8.9e-23 110.9 109 56.0
Duzib213G1023 Durio zibethinus HOM05D003240 ORTHO05D009426 1.5e-22 110.2 121 51.2
Lj3g0021284 Lotus japonicus HOM05D003240 ORTHO05D009426 1.5e-22 110.2 122 51.6
MBI07_g30192_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 1.5e-22 110.2 118 54.2
PGR083G0779 Punica granatum HOM05D003240 ORTHO05D009426 1.5e-22 110.2 117 50.4
Glyma.12G225100 Glycine max HOM05D003240 ORTHO05D009426 2.0e-22 109.8 120 48.3
Atru.chr2.2486 Acer truncatum HOM05D003240 ORTHO05D009426 2.6e-22 109.4 81 63.0
Cfa020578 Carpinus fangiana HOM05D003240 ORTHO05D009426 7.5e-22 107.8 101 54.5
Gohir.D05G352700 Gossypium hirsutum HOM05D003240 ORTHO05D009426 9.8e-22 107.5 123 49.6
Sabra11G0103500 Salix brachista HOM05D003240 ORTHO05D009426 1.3e-21 107.1 114 50.0
Migut.M00801 Erythranthe guttata HOM05D003240 ORTHO05D009426 1.7e-21 106.7 121 52.9
Nitab4.5_0001336g0090 Nicotiana tabacum HOM05D003240 ORTHO05D009426 2.9e-21 105.9 114 50.9
VMungo1080G0324 Vigna mungo HOM05D003240 ORTHO05D009426 2.9e-21 105.9 121 46.3
Gohir.A04G031760 Gossypium hirsutum HOM05D003240 ORTHO05D009426 3.7e-21 105.5 123 48.8
Gohir.A04G031920 Gossypium hirsutum HOM05D003240 ORTHO05D009426 3.7e-21 105.5 123 48.8
Gorai.009G385100 Gossypium raimondii HOM05D003240 ORTHO05D009426 3.7e-21 105.5 123 48.8
Gohir.D05G352600 Gossypium hirsutum HOM05D003240 ORTHO05D009426 4.9e-21 105.1 123 48.8
Gorai.009G384700 Gossypium raimondii HOM05D003240 ORTHO05D009426 4.9e-21 105.1 123 48.8
CANSAT56G1752 Cannabis sativa HOM05D003240 ORTHO05D009426 6.4e-21 104.8 64 75.0
CAN.G162.53 Capsicum annuum HOM05D003240 ORTHO05D009426 6.4e-21 104.8 118 49.2
MD03G1228400 Malus domestica HOM05D003240 ORTHO05D009426 6.4e-21 104.8 109 55.0
Sopen07g031280 Solanum pennellii HOM05D003240 ORTHO05D009426 1.9e-20 103.2 107 50.5
Ciclev10010456m.g Citrus clementina HOM05D003240 ORTHO05D009426 3.2e-20 102.4 107 45.8
Gorai.009G384900 Gossypium raimondii HOM05D003240 ORTHO05D009426 3.2e-20 102.4 123 47.2
Cpa.g.sc80.73 Carica papaya HOM05D003240 ORTHO05D009426 5.4e-20 101.7 91 56.0
Lj3g0010365 Lotus japonicus HOM05D003240 ORTHO05D009426 5.4e-20 101.7 119 47.9
Phvul.005G072700 Phaseolus vulgaris HOM05D003240 ORTHO05D009426 7.0e-20 101.3 120 45.0
Hma1.2p1_0458F.1_g157090 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 9.2e-20 100.9 83 60.2
PGSC0003DMG400012465 Solanum tuberosum HOM05D003240 ORTHO05D009426 2.0e-19 99.8 107 49.5
Nitab4.5_0001241g0070 Nicotiana tabacum HOM05D003240 ORTHO05D009426 2.7e-19 99.4 116 48.3
Gohir.A04G032000 Gossypium hirsutum HOM05D003240 ORTHO05D009426 7.8e-19 97.8 110 45.5
Thhalv10012399m.g Eutrema salsugineum HOM05D003240 ORTHO05D009426 1.7e-18 96.7 122 42.6
AT1G53130 Arabidopsis thaliana HOM05D003240 ORTHO05D009426 3.0e-18 95.9 123 43.1
COL.COLO4_27180 Corchorus olitorius HOM05D003240 ORTHO05D009426 3.0e-18 95.9 124 46.8
CARHR043350 Cardamine hirsuta HOM05D003240 ORTHO05D009426 5.0e-18 95.1 123 39.0
SGA_v2.0_scaffold73G24260 Striga asiatica HOM05D003240 ORTHO05D009426 5.0e-18 95.1 67 68.7
Carub.0001s4229 Capsella rubella HOM05D003240 ORTHO05D009426 8.6e-18 94.4 125 40.8
TPR.G39028 Trifolium pratense HOM05D003240 ORTHO05D009426 1.9e-17 93.2 108 48.1
AL1G61490 Arabidopsis lyrata HOM05D003240 ORTHO05D009426 2.5e-17 92.8 125 40.0
Nn1g04123 Nelumbo nucifera HOM05D003240 ORTHO05D009426 3.3e-17 92.4 110 46.4
Aa31LG10G2000 Aethionema arabicum HOM05D003240 ORTHO05D009426 5.6e-17 91.7 119 40.3
A06p01190 Brassica napus HOM05D003240 ORTHO05D009426 7.3e-17 91.3 122 40.2
BraA06t23346Z Brassica rapa HOM05D003240 ORTHO05D009426 7.3e-17 91.3 122 40.2
Lalb_Chr03g0042631 Lupinus albus HOM05D003240 ORTHO05D009426 1.2e-16 90.5 108 50.0
Medtr2g085360 Medicago truncatula HOM05D003240 ORTHO05D009426 1.2e-16 90.5 108 49.1
BcaC08g43498 Brassica carinata HOM05D003240 ORTHO05D009426 1.6e-16 90.1 122 39.3
C06p08830 Brassica napus HOM05D003240 ORTHO05D009426 1.6e-16 90.1 122 39.3
BolC6t35961H Brassica oleracea HOM05D003240 ORTHO05D017503 1.6e-16 90.1 122 39.3
Gorai.009G385000 Gossypium raimondii HOM05D003240 ORTHO05D009426 1.6e-16 90.1 71 57.7
BcaB07g33356 Brassica carinata HOM05D003240 ORTHO05D009426 2.1e-16 89.7 122 40.2
Medtr2g085370 Medicago truncatula HOM05D003240 ORTHO05D009426 2.1e-16 89.7 119 43.7
Sp1g39680 Schrenkiella parvula HOM05D003240 ORTHO05D009426 4.7e-16 88.6 124 40.3
THA.LOC104818082 Tarenaya hassleriana HOM05D003240 ORTHO05D009426 8.1e-16 87.8 114 41.2
TPR.G38961 Trifolium pratense HOM05D003240 ORTHO05D009426 8.1e-16 87.8 113 43.4
Carub.0003s1496 Capsella rubella HOM05D003240 ORTHO05D009426 1.1e-15 87.4 116 38.8
Sp3g13510 Schrenkiella parvula HOM05D003240 ORTHO05D009426 1.8e-15 86.7 122 36.1
Thhalv10022293m.g Eutrema salsugineum HOM05D003240 ORTHO05D009426 2.3e-15 86.3 122 36.9
ATR0737G149 Amborella trichopoda HOM05D003240 ORTHO05D009426 3.4e-14 82.4 79 55.7
BcaB04g20937 Brassica carinata HOM05D000882 ORTHO05D009426 4.4e-14 82.0 90 46.7
BcaC09g48486 Brassica carinata HOM05D003240 ORTHO05D009426 5.8e-14 81.6 113 37.2
BcaNung07375 Brassica carinata HOM05D003240 ORTHO05D009426 5.8e-14 81.6 56 57.1
AL3G27700 Arabidopsis lyrata HOM05D003240 ORTHO05D009426 7.5e-14 81.3 121 36.4
Glyma.13G276200 Glycine max HOM05D003240 ORTHO05D009426 9.8e-14 80.9 107 43.0
PSO541G3864 Papaver somniferum HOM05D003240 ORTHO05D009426 4.1e-12 75.5 108 39.8
PSO675G7736 Papaver somniferum HOM05D003240 ORTHO05D009426 1.2e-11 73.9 104 39.4
Rhsim06G0199500 Rhododendron simsii HOM05D003240 ORTHO05D009426 1.6e-08 63.5 123 38.2
HPP92_020058 Vanilla planifolia HOM05D003240 ORTHO05D009426 3.4e-06 55.8 70 45.7


User provided reference genes

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