Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14873 Davidia involucrata HOM05D004237 ORTHO05D005002 3.5e-184 648.3 361 100.0
CSS0027261 Camellia sinensis var. sinensis HOM05D004237 ORTHO05D005002 8.8e-159 563.9 397 81.9
Sopen02g035740 Solanum pennellii HOM05D004237 ORTHO05D005002 1.5e-129 466.8 390 67.9
Actinidia17655 Actinidia chinensis HOM05D004237 ORTHO05D005002 1.5e-126 456.8 362 69.6
Nitab4.5_0002248g0060 Nicotiana tabacum HOM05D004237 ORTHO05D005002 4.4e-126 455.3 389 69.9
Solyc02g091090.4 Solanum lycopersicum HOM05D004237 ORTHO05D005002 9.8e-126 454.1 381 68.2
Hund16204 Selenicereus undatus HOM05D004237 ORTHO05D005002 8.3e-125 451.1 404 62.4
TAR633G2403 Trochodendron aralioides HOM05D004237 ORTHO05D005002 3.8e-122 442.2 395 69.9
EL10Ac2g04487 Beta vulgaris HOM05D004237 ORTHO05D005002 1.6e-120 436.8 397 67.8
Gorai.009G294600 Gossypium raimondii HOM05D004237 ORTHO05D005002 1.6e-120 436.8 404 66.3
Gohir.A05G279600 Gossypium hirsutum HOM05D004237 ORTHO05D005002 2.1e-120 436.4 404 66.8
Gohir.D05G281200 Gossypium hirsutum HOM05D004237 ORTHO05D005002 8.0e-120 434.5 404 66.3
Oeu047420.1 Olea europaea HOM05D004237 ORTHO05D005002 2.9e-117 426.0 369 63.7
Prupe.3G158400 Prunus persica HOM05D004237 ORTHO05D005002 2.4e-116 422.9 414 65.0
DCAR_025876 Daucus carota HOM05D004237 ORTHO05D005002 3.2e-116 422.5 377 67.6
CAN.G625.84 Capsicum annuum HOM05D004237 ORTHO05D005002 5.4e-116 421.8 362 64.1
Duzib106G0201 Durio zibethinus HOM05D004237 ORTHO05D005002 9.2e-116 421.0 407 67.6
Sabra04G0058600 Salix brachista HOM05D004237 ORTHO05D005002 7.8e-115 417.9 401 58.6
FvH4_7g06071 Fragaria vesca HOM05D004237 ORTHO05D005002 1.0e-114 417.5 414 60.9
CiPaw.03G068200 Carya illinoinensis HOM05D004237 ORTHO05D005002 1.3e-114 417.2 400 57.8
Rhsim08G0085800 Rhododendron simsii HOM05D004237 ORTHO05D005002 1.3e-114 417.2 388 66.5
Cc07_g08200 Coffea canephora HOM05D004237 ORTHO05D005002 3.9e-114 415.6 389 61.7
Potri.004G088000 Populus trichocarpa HOM05D004237 ORTHO05D005002 8.6e-114 414.5 410 59.3
MD09G1261100 Malus domestica HOM05D004237 ORTHO05D005002 4.3e-113 412.1 416 63.0
FAN06G1641 Fragaria x ananassa HOM05D004237 ORTHO05D005002 5.6e-113 411.8 413 60.3
Cfa007846 Carpinus fangiana HOM05D004237 ORTHO05D005002 1.0e-111 407.5 422 60.2
GSVIVG01030867001 Vitis vinifera HOM05D004237 ORTHO05D005002 1.0e-111 407.5 362 69.6
Manes.03G011500 Manihot esculenta HOM05D004237 ORTHO05D005002 3.1e-111 406.0 406 62.6
RcHm_v2.0_Chr7g0221661 Rosa chinensis HOM05D004237 ORTHO05D005002 3.1e-111 406.0 410 60.5
AUR62023243 Chenopodium quinoa HOM05D004237 ORTHO05D005002 4.0e-111 405.6 394 57.9
Atru.chr4.1671 Acer truncatum HOM05D004237 ORTHO05D005002 2.6e-110 402.9 401 64.3
SalBow3G4435 Salvia bowleyana HOM05D004237 ORTHO05D005002 3.4e-110 402.5 404 63.1
Haze_14220 Corylus avellana HOM05D004237 ORTHO05D005002 4.4e-110 402.1 414 59.2
Nn3g18884 Nelumbo nucifera HOM05D004237 ORTHO05D005002 1.9e-108 396.7 405 63.2
Thecc.10G175300 Theobroma cacao HOM05D004237 ORTHO05D005002 5.4e-108 395.2 404 64.1
Sc11g0008610 Simmondsia chinensis HOM05D004237 ORTHO05D005002 8.6e-106 387.9 374 58.3
HanXRQChr09g0262291 Helianthus annuus HOM05D004237 ORTHO05D005002 1.2e-104 384.0 384 60.4
Hma1.2p1_3512F.1_g336510 Hydrangea macrophylla HOM05D004237 ORTHO05D005002 1.7e-101 373.6 361 60.7
Phvul.008G233700 Phaseolus vulgaris HOM05D004237 ORTHO05D005002 6.4e-101 371.7 368 63.0
ECA232G1788 Erigeron canadensis HOM05D004237 ORTHO05D005002 1.1e-100 370.9 375 58.7
PGR004G2154 Punica granatum HOM05D004237 ORTHO05D005002 1.4e-100 370.5 420 59.5
Glyma.02G247200 Glycine max HOM05D004237 ORTHO05D005002 5.4e-100 368.6 363 63.1
Eucgr.F02819 Eucalyptus grandis HOM05D004237 ORTHO05D005002 1.2e-99 367.5 436 49.3
Lsat_1_v5_gn_4_154701 Lactuca sativa HOM05D004237 ORTHO05D005002 1.3e-98 364.0 389 58.9
CANSAT54G2538 Cannabis sativa HOM05D004237 ORTHO05D005002 7.3e-97 358.2 428 56.5
Aqoxy5G01640 Aquilegia oxysepala HOM05D004237 ORTHO05D005002 2.1e-96 356.7 403 60.3
SGA_v2.0_scaffold149G36490 Striga asiatica HOM05D004237 ORTHO05D005002 2.1e-96 356.7 412 50.5
Sed0014224 Sechium edule HOM05D004237 ORTHO05D005002 5.2e-95 352.1 391 59.6
Migut.H00265 Erythranthe guttata HOM05D004237 ORTHO05D005002 1.5e-94 350.5 397 53.1
MELO3C020294.2 Cucumis melo HOM05D004237 ORTHO05D005002 7.1e-92 341.7 420 56.2
Lalb_Chr10g0104521 Lupinus albus HOM05D004237 ORTHO05D005002 1.2e-91 340.9 373 61.9
ClCG05G010910 Citrullus lanatus HOM05D004237 ORTHO05D005002 6.0e-91 338.6 422 53.3
arahy.Tifrunner.gnm1.ann1.MQJ11K Arachis hypogaea HOM05D004237 ORTHO05D005002 1.0e-90 337.8 378 60.8
SHI19441 Sapria himalayana HOM05D004237 ORTHO05D005002 3.9e-90 335.9 386 50.8
QL11p004173 Quercus lobata HOM05D004237 ORTHO05D005002 8.6e-90 334.7 407 49.6
arahy.Tifrunner.gnm1.ann1.68W1N1 Arachis hypogaea HOM05D004237 ORTHO05D005002 2.5e-89 333.2 379 61.2
Cpa.g.sc118.40 Carica papaya HOM05D004237 ORTHO05D005002 4.3e-89 332.4 383 56.1
CsaV3_3G021670 Cucumis sativus L. HOM05D004237 ORTHO05D005002 4.3e-89 332.4 417 54.7
LjContig00141g0018818 Lotus japonicus HOM05D004237 ORTHO05D005002 7.6e-86 321.6 372 59.9
Psat2g041040 Pisum sativum HOM05D004237 ORTHO05D005002 2.4e-84 316.6 378 52.6
TPR.G3499 Trifolium pratense HOM05D004237 ORTHO05D005002 7.8e-83 311.6 365 59.2
Nitab4.5_0004399g0090 Nicotiana tabacum HOM05D004237 ORTHO05D005002 2.1e-80 303.5 301 64.5
unitig_899.g14517 Utricularia gibba HOM05D004236 ORTHO05D004903 6.9e-79 298.5 397 52.1
Ca_05866_v3 Cicer arietinum L. HOM05D004237 ORTHO05D005002 1.3e-77 294.3 378 56.1
Ca_29976_v3 Cicer arietinum L. HOM05D004237 ORTHO05D005002 1.3e-77 294.3 378 56.1
Medtr5g079680 Medicago truncatula HOM05D004237 ORTHO05D005002 2.7e-75 286.6 365 57.8
Peaxi162Scf00003g00001 Petunia axillaris HOM05D004237 ORTHO05D005002 1.0e-74 284.6 306 60.8
Lj2P435T33 Lonicera japonica HOM05D004237 ORTHO05D005002 3.9e-66 256.1 261 67.8
CDE02G0048 Ceratophyllum demersum HOM05D004237 ORTHO05D005002 3.5e-59 233.0 233 54.9
CDE09G1075 Ceratophyllum demersum HOM05D004237 ORTHO05D005002 4.6e-59 232.6 363 41.6
AUR62023195 Chenopodium quinoa HOM05D004237 ORTHO05D005002 1.8e-58 230.7 292 49.7
ATR0743G026 Amborella trichopoda HOM05D004237 ORTHO05D005002 8.5e-53 211.8 476 40.8
MBI08_g18909_MAGBIO Magnolia biondii HOM05D004237 ORTHO05D005002 7.9e-51 205.3 283 45.6
Glyma.14G069000 Glycine max HOM05D004237 ORTHO05D005002 1.3e-48 198.0 291 53.3
SEGI_05374 Sequoiadendron giganteum HOM05D004237 ORTHO05D005002 5.9e-46 189.1 453 40.4
RcHm_v2.0_Chr1g0334211 Rosa chinensis HOM05D004237 ORTHO05D005002 1.5e-41 174.5 279 40.9
MBI11_g07416_MAGBIO Magnolia biondii HOM05D004237 ORTHO05D005002 2.6e-41 173.7 234 44.9
Mapoly0008s0013 Marchantia polymorpha HOM05D004237 ORTHO05D005002 2.6e-41 173.7 123 65.9
HanXRQChr15g0484241 Helianthus annuus HOM05D004237 ORTHO05D005002 3.3e-41 173.3 369 37.1
GSVIVG01021000001 Vitis vinifera HOM05D004237 ORTHO05D005002 4.4e-41 172.9 361 38.8
Cpa.g.sc83.32 Carica papaya HOM05D004237 ORTHO05D005002 9.7e-41 171.8 211 47.9
SEGI_20207 Sequoiadendron giganteum HOM05D004237 ORTHO05D005002 9.7e-41 171.8 188 50.5
Ca_17976_v3 Cicer arietinum L. HOM05D004237 ORTHO05D005002 2.2e-40 170.6 192 49.5
PGSC0003DMG400026424 Solanum tuberosum HOM05D004237 ORTHO05D005002 4.8e-40 169.5 191 47.6
Actinidia11451 Actinidia chinensis HOM05D004237 ORTHO05D005002 8.2e-40 168.7 257 40.9
Sabra16G0201600 Salix brachista HOM05D004237 ORTHO05D005002 1.8e-39 167.5 452 36.1
CiPaw.01G118000 Carya illinoinensis HOM05D004237 ORTHO05D005002 2.4e-39 167.2 200 45.0
Glyma.05G153300 Glycine max HOM05D004237 ORTHO05D005002 2.4e-39 167.2 207 44.4
ATR0561G250 Amborella trichopoda HOM05D004237 ORTHO05D005002 3.1e-39 166.8 160 53.8
MELO3C020354.2 Cucumis melo HOM05D004237 ORTHO05D005002 3.1e-39 166.8 204 45.6
DCAR_030819 Daucus carota HOM05D004237 ORTHO05D005002 3.1e-39 166.8 256 41.0
Sc13g0000310 Simmondsia chinensis HOM05D004237 ORTHO05D005002 3.1e-39 166.8 183 50.8
Peaxi162Scf00047g00110 Petunia axillaris HOM05D004237 ORTHO05D005002 4.1e-39 166.4 148 55.4
Lj4g0001711 Lotus japonicus HOM05D004237 ORTHO05D005002 1.2e-38 164.9 194 47.4
Medtr8g085190 Medicago truncatula HOM05D004237 ORTHO05D005002 1.2e-38 164.9 198 44.9
CsaV3_2G011170 Cucumis sativus L. HOM05D004237 ORTHO05D005002 1.5e-38 164.5 204 44.6
Nitab4.5_0007828g0040 Nicotiana tabacum HOM05D004237 ORTHO05D005002 1.5e-38 164.5 150 53.3
Thecc.04G196500 Theobroma cacao HOM05D004237 ORTHO05D005002 1.5e-38 164.5 225 44.0
Psat7g073000 Pisum sativum HOM05D004237 ORTHO05D005002 2.6e-38 163.7 123 61.0
Prupe.1G163000 Prunus persica HOM05D004237 ORTHO05D005002 3.4e-38 163.3 211 46.0
Potri.001G318600 Populus trichocarpa HOM05D004237 ORTHO05D005002 4.5e-38 162.9 276 38.0
CANSAT78G0306 Cannabis sativa HOM05D004237 ORTHO05D005002 5.9e-38 162.5 204 46.6
Solyc09g092210.4 Solanum lycopersicum HOM05D004237 ORTHO05D005002 5.9e-38 162.5 149 53.7
Sopen09g035130 Solanum pennellii HOM05D004237 ORTHO05D005002 5.9e-38 162.5 149 53.7
Sabra17G0051800 Salix brachista HOM05D004237 ORTHO05D005002 7.7e-38 162.2 276 37.0
Cfa014954 Carpinus fangiana HOM05D004237 ORTHO05D005002 1.0e-37 161.8 193 45.6
Dinv38185 Davidia involucrata HOM05D004237 ORTHO05D005002 1.0e-37 161.8 202 44.6
FAN12G1632 Fragaria x ananassa HOM05D004237 ORTHO05D005002 1.0e-37 161.8 203 47.8
Phvul.003G050200 Phaseolus vulgaris HOM05D004237 ORTHO05D005002 1.0e-37 161.8 270 38.1
TAR636G2161 Trochodendron aralioides HOM05D004237 ORTHO05D005002 1.0e-37 161.8 194 46.4
TPR.G11799 Trifolium pratense HOM05D004237 ORTHO05D005002 2.2e-37 160.6 208 43.8
CAN.G1565.17 Capsicum annuum HOM05D004237 ORTHO05D005002 2.9e-37 160.2 119 62.2
FvH4_4g13400 Fragaria vesca HOM05D004237 ORTHO05D005002 2.9e-37 160.2 203 47.3
Actinidia28992 Actinidia chinensis HOM05D004237 ORTHO05D005002 5.0e-37 159.5 257 39.7
Haze_11643 Corylus avellana HOM05D004237 ORTHO05D005002 5.0e-37 159.5 193 45.6
Manes.15G056100 Manihot esculenta HOM05D004237 ORTHO05D005002 5.0e-37 159.5 222 41.0
Manes.03G145100 Manihot esculenta HOM05D004237 ORTHO05D005002 6.5e-37 159.1 424 34.9
Rhsim02G0061200 Rhododendron simsii HOM05D004237 ORTHO05D005002 6.5e-37 159.1 120 60.8
RhsimUnG0035800 Rhododendron simsii HOM05D004237 ORTHO05D005002 6.5e-37 159.1 120 60.8
Atru.chr4.1600 Acer truncatum HOM05D004237 ORTHO05D005002 8.5e-37 158.7 189 45.5
CDE05G0646 Ceratophyllum demersum HOM05D004237 ORTHO05D005002 8.5e-37 158.7 183 50.8
CSS0022501 Camellia sinensis var. sinensis HOM05D004237 ORTHO05D005002 1.1e-36 158.3 189 47.6
Lalb_Chr07g0186771 Lupinus albus HOM05D004237 ORTHO05D005002 1.1e-36 158.3 184 47.3
VMungo0251G2499 Vigna mungo HOM05D004237 ORTHO05D005002 1.1e-36 158.3 196 44.9
FAN07G1461 Fragaria x ananassa HOM05D004237 ORTHO05D005002 1.4e-36 157.9 203 46.8
Gohir.A10G128300 Gossypium hirsutum HOM05D004237 ORTHO05D005002 1.4e-36 157.9 216 43.5
vmacro15560 Vaccinium macrocarpon HOM05D004237 ORTHO05D005002 1.4e-36 157.9 168 50.6
MD04G1016300 Malus domestica HOM05D004237 ORTHO05D005002 1.9e-36 157.5 213 44.6
Eucgr.H02692 Eucalyptus grandis HOM05D004237 ORTHO05D005002 2.5e-36 157.1 231 42.9
Oeu025033.1 Olea europaea HOM05D004237 ORTHO05D005002 2.5e-36 157.1 202 46.5
Hma1.2p1_2958F.1_g330800 Hydrangea macrophylla HOM05D004237 ORTHO05D005002 7.2e-36 155.6 193 46.1
SGA_v2.0_scaffold31G12582 Striga asiatica HOM05D004237 ORTHO05D005002 9.4e-36 155.2 115 59.1
RcHm_v2.0_Chr4g0413771 Rosa chinensis HOM05D004237 ORTHO05D005002 1.6e-35 154.5 210 44.3
Dinv27207 Davidia involucrata HOM05D004237 ORTHO05D005002 2.1e-35 154.1 440 37.7
unitig_45.g31537 Utricularia gibba HOM05D004237 ORTHO05D005002 2.7e-35 153.7 121 56.2
unitig_578.g16513 Utricularia gibba HOM05D004237 ORTHO05D005002 2.7e-35 153.7 121 56.2
MD13G1282300 Malus domestica HOM05D004237 ORTHO05D005002 6.1e-35 152.5 213 43.7
Duzib212G0922 Durio zibethinus HOM05D004237 ORTHO05D005002 1.0e-34 151.8 183 44.8
Potri.017G058200 Populus trichocarpa HOM05D004237 ORTHO05D005002 1.4e-34 151.4 441 33.1
RcHm_v2.0_Chr1g0333491 Rosa chinensis HOM05D003866 ORTHO05D004508 1.4e-34 151.4 92 78.3
arahy.Tifrunner.gnm1.ann1.BLV0FA Arachis hypogaea HOM05D004237 ORTHO05D005002 1.8e-34 151.0 445 31.0
arahy.Tifrunner.gnm1.ann1.T9JHLZ Arachis hypogaea HOM05D004237 ORTHO05D005002 1.8e-34 151.0 445 31.0
CBR_g29388 Chara braunii HOM05D004237 ORTHO05D005002 2.3e-34 150.6 121 57.0
MSTRG.21980 Avicennia marina HOM05D004237 ORTHO05D005002 3.0e-34 150.2 430 35.6
Oeu063463.1 Olea europaea HOM05D004237 ORTHO05D005002 3.0e-34 150.2 416 36.8
Lsat_1_v5_gn_2_45661 Lactuca sativa HOM05D004237 ORTHO05D005002 8.8e-34 148.7 388 30.4
ECA238G4613 Erigeron canadensis HOM05D004237 ORTHO05D005002 1.3e-32 144.8 375 38.1
Ciclev10004964m.g Citrus clementina HOM05D004237 ORTHO05D005002 3.7e-32 143.3 454 34.6
HPP92_024243 Vanilla planifolia HOM05D004237 ORTHO05D005002 1.1e-31 141.7 123 53.7
COL.COLO4_20213 Corchorus olitorius HOM05D004237 ORTHO05D005002 7.0e-31 139.0 203 44.3
QL06p026437 Quercus lobata HOM05D004237 ORTHO05D005002 7.0e-31 139.0 100 63.0
Sed0001983 Sechium edule HOM05D004237 ORTHO05D005002 2.6e-30 137.1 178 43.8
Aqoxy2G03968 Aquilegia oxysepala HOM05D004237 ORTHO05D005002 4.5e-30 136.3 439 34.9
AUR62020847 Chenopodium quinoa HOM05D004237 ORTHO05D005002 5.0e-29 132.9 196 41.8
Gorai.011G152800 Gossypium raimondii HOM05D004237 ORTHO05D005002 8.5e-29 132.1 197 41.6
Migut.N00416 Erythranthe guttata HOM05D004237 ORTHO05D005002 1.5e-28 131.3 195 40.5
Gohir.D10G137600 Gossypium hirsutum HOM05D004237 ORTHO05D005002 7.2e-28 129.0 197 42.6
RcHm_v2.0_Chr1g0333501 Rosa chinensis HOM05D004237 ORTHO05D005002 1.5e-20 104.8 180 38.3
PSO017G6634 Papaver somniferum HOM05D004237 ORTHO05D005002 4.8e-16 89.7 201 33.8
Peaxi162Scf00013g03225 Petunia axillaris HOM05D004237 ORTHO05D005002 7.2e-12 75.9 53 67.9


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