Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14862 Davidia involucrata HOM05D007637 ORTHO05D009508 3.8e-61 238.0 124 100.0
Dinv33980 Davidia involucrata HOM05D007637 ORTHO05D009508 5.5e-36 154.5 109 77.1
Hma1.2p1_0283F.1_g113660 Hydrangea macrophylla HOM05D007637 ORTHO05D009508 1.8e-34 149.4 125 67.2
GSVIVG01030920001 Vitis vinifera HOM05D007637 ORTHO05D009508 5.1e-34 147.9 124 61.3
GSVIVG01030918001 Vitis vinifera HOM05D007637 ORTHO05D009508 1.1e-33 146.7 124 62.1
GSVIVG01030917001 Vitis vinifera HOM05D007637 ORTHO05D009508 2.6e-33 145.6 124 61.3
Thecc.04G125100 Theobroma cacao HOM05D007637 ORTHO05D009508 9.7e-33 143.7 124 61.3
Ciclev10013623m.g Citrus clementina HOM05D007637 ORTHO05D009508 1.1e-31 140.2 128 57.8
Actinidia36353 Actinidia chinensis HOM05D007637 ORTHO05D009508 5.3e-31 137.9 125 63.2
TAR629G1467 Trochodendron aralioides HOM05D007637 ORTHO05D009508 6.5e-29 131.0 124 58.9
Oeu047428.1 Olea europaea HOM05D007637 ORTHO05D009508 1.1e-28 130.2 124 58.1
Gohir.D07G182150 Gossypium hirsutum HOM05D007637 ORTHO05D009508 2.5e-28 129.0 125 55.2
Gorai.001G203000 Gossypium raimondii HOM05D007637 ORTHO05D009508 2.5e-28 129.0 125 55.2
TAR374G0670 Trochodendron aralioides HOM05D007637 ORTHO05D009508 3.2e-28 128.6 124 58.1
CSS0034381 Camellia sinensis var. sinensis HOM05D007637 ORTHO05D009508 4.2e-28 128.3 124 59.7
CiPaw.04G044900 Carya illinoinensis HOM05D007637 ORTHO05D009508 1.6e-27 126.3 124 53.2
Duzib133G0287 Durio zibethinus HOM05D007637 ORTHO05D009508 4.7e-27 124.8 124 54.0
Gohir.A07G175550 Gossypium hirsutum HOM05D007637 ORTHO05D009508 6.1e-27 124.4 125 53.6
MD09G1259400 Malus domestica HOM05D007637 ORTHO05D009508 8.8e-26 120.6 128 53.1
Gohir.A07G075400 Gossypium hirsutum HOM05D007637 ORTHO05D009508 2.0e-25 119.4 129 55.0
Medtr7g082920 Medicago truncatula HOM05D007637 ORTHO05D009508 3.3e-25 118.6 128 54.7
Manes.02G073000 Manihot esculenta HOM05D007637 ORTHO05D009508 4.4e-25 118.2 127 53.5
Eucgr.J01537 Eucalyptus grandis HOM05D007637 ORTHO05D009508 1.3e-24 116.7 128 54.7
DCAR_010721 Daucus carota HOM05D007637 ORTHO05D009508 1.7e-24 116.3 130 52.3
Gohir.D07G079900 Gossypium hirsutum HOM05D007637 ORTHO05D009508 2.8e-24 115.5 129 54.3
Gorai.001G084700 Gossypium raimondii HOM05D007637 ORTHO05D009508 2.8e-24 115.5 129 54.3
Lj1g0007116 Lotus japonicus HOM05D007637 ORTHO05D009508 6.3e-24 114.4 132 50.8
Cfa007872 Carpinus fangiana HOM05D007637 ORTHO05D009508 8.2e-24 114.0 124 52.4
TPR.G28401 Trifolium pratense HOM05D007637 ORTHO05D009508 1.4e-23 113.2 128 52.3
Eucgr.J01536 Eucalyptus grandis HOM05D007637 ORTHO05D009508 1.8e-23 112.8 129 51.9
MD09G1259200 Malus domestica HOM05D007637 ORTHO05D009508 5.3e-23 111.3 127 49.6
Manes.14G136000 Manihot esculenta HOM05D007637 ORTHO05D009508 9.1e-23 110.5 120 47.5
Sed0013286 Sechium edule HOM05D007637 ORTHO05D009508 2.7e-22 109.0 127 45.7
Oeu007437.1 Olea europaea HOM05D007637 ORTHO05D009508 4.5e-22 108.2 121 47.9
Phvul.008G009500 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 1.0e-21 107.1 123 51.2
Psat3g096920 Pisum sativum HOM05D007637 ORTHO05D009508 1.7e-21 106.3 132 50.8
Rhsim10G0078000 Rhododendron simsii HOM05D007637 ORTHO05D009508 1.7e-21 106.3 128 53.1
Atru.chr1.1552 Acer truncatum HOM05D007637 ORTHO05D009508 2.2e-21 105.9 119 52.9
Glyma.02G090700 Glycine max HOM05D007637 ORTHO05D009508 5.0e-21 104.8 127 50.4
MBI10_g37696_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 6.5e-21 104.4 127 49.6
Eucgr.J01538 Eucalyptus grandis HOM05D007637 ORTHO05D009508 1.1e-20 103.6 129 50.4
Potri.017G122100 Populus trichocarpa HOM05D007637 ORTHO05D009508 1.1e-20 103.6 126 49.2
Glyma.18G292400 Glycine max HOM05D007637 ORTHO05D009508 1.9e-20 102.8 128 49.2
Sabra04G0062800 Salix brachista HOM05D007637 ORTHO05D009508 3.2e-20 102.1 130 52.3
Manes.06G062300 Manihot esculenta HOM05D007637 ORTHO05D009508 4.2e-20 101.7 120 46.7
PGR042G0465 Punica granatum HOM05D007637 ORTHO05D009508 7.2e-20 100.9 111 47.7
TAR622G1280 Trochodendron aralioides HOM05D007637 ORTHO05D009508 7.2e-20 100.9 98 55.1
Rhsim10G0078100 Rhododendron simsii HOM05D007637 ORTHO05D009508 9.4e-20 100.5 110 54.5
Prupe.3G151000 Prunus persica HOM05D007637 ORTHO05D009508 1.2e-19 100.1 126 48.4
Haze_14202 Corylus avellana HOM05D007637 ORTHO05D009508 1.6e-19 99.8 90 57.8
SalBow3G1214 Salvia bowleyana HOM05D007637 ORTHO05D009508 2.1e-19 99.4 124 54.0
SalBow3G3066 Salvia bowleyana HOM05D007637 ORTHO05D009508 2.1e-19 99.4 124 54.0
Solyc02g091193.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 3.6e-19 98.6 124 47.6
Manes.01G114400 Manihot esculenta HOM05D007637 ORTHO05D009508 1.8e-18 96.3 126 46.8
Dinv16187 Davidia involucrata HOM05D007637 ORTHO05D009508 2.3e-18 95.9 121 45.5
Actinidia15914 Actinidia chinensis HOM05D007637 ORTHO05D009508 4.0e-18 95.1 107 54.2
COL.COLO4_38443 Corchorus olitorius HOM05D007637 ORTHO05D009508 4.0e-18 95.1 101 56.4
Gohir.D07G182500 Gossypium hirsutum HOM05D007637 ORTHO05D009508 5.2e-18 94.7 122 44.3
Manes.02G073100 Manihot esculenta HOM05D007637 ORTHO05D009508 5.2e-18 94.7 125 45.6
Gorai.001G203100 Gossypium raimondii HOM05D007637 ORTHO05D009508 1.2e-17 93.6 122 43.4
PGSC0003DMG400030637 Solanum tuberosum HOM05D007637 ORTHO05D009508 1.5e-17 93.2 124 46.8
Cpa.g.sc116.6 Carica papaya HOM05D007637 ORTHO05D009508 5.7e-17 91.3 128 45.3
Potri.010G115900 Populus trichocarpa HOM05D007637 ORTHO05D009508 5.7e-17 91.3 99 46.5
Thecc.04G124800 Theobroma cacao HOM05D007637 ORTHO05D009508 9.8e-17 90.5 93 52.7
Lalb_Chr17g0336081 Lupinus albus HOM05D007637 ORTHO05D009508 2.2e-16 89.4 99 48.5
arahy.Tifrunner.gnm1.ann1.AC9JIC Arachis hypogaea HOM05D007637 ORTHO05D009508 2.8e-16 89.0 106 48.1
arahy.Tifrunner.gnm1.ann1.BY2X14 Arachis hypogaea HOM05D007637 ORTHO05D009508 2.8e-16 89.0 106 48.1
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 3.7e-16 88.6 100 46.0
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 3.7e-16 88.6 100 46.0
Nitab4.5_0005700g0020 Nicotiana tabacum HOM05D007637 ORTHO05D009508 6.3e-16 87.8 129 45.7
CiPaw.05G246900 Carya illinoinensis HOM05D007637 ORTHO05D009508 1.4e-15 86.7 118 44.9
TWI79G1694 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 1.4e-15 86.7 125 43.2
VMungo1383G3686 Vigna mungo HOM05D007637 ORTHO05D009508 1.8e-15 86.3 121 43.8
Lsat_1_v5_gn_4_155320 Lactuca sativa HOM05D007637 ORTHO05D009508 4.1e-15 85.1 118 41.5
HanXRQChr09g0262421 Helianthus annuus HOM05D007637 ORTHO05D009508 7.0e-15 84.3 123 42.3
Lalb_Chr17g0336031 Lupinus albus HOM05D007637 ORTHO05D009508 7.0e-15 84.3 101 47.5
TWI74G0234 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 9.1e-15 84.0 116 48.3
Actinidia31983 Actinidia chinensis HOM05D007637 ORTHO05D009508 1.6e-14 83.2 83 56.6
Actinidia33410 Actinidia chinensis HOM05D007637 ORTHO05D009508 2.2e-13 79.3 106 45.3
ATR0326G042 Amborella trichopoda HOM05D007637 ORTHO05D009508 5.0e-13 78.2 98 42.9
QL01p002403 Quercus lobata HOM05D006556 ORTHO05D008146 6.5e-13 77.8 78 51.3
Glyma.10G266100 Glycine max HOM05D007637 ORTHO05D009508 1.1e-12 77.0 120 40.8
Nitab4.5_0002456g0080 Nicotiana tabacum HOM05D007637 ORTHO05D009508 1.5e-12 76.6 74 55.4
Glyma.20G124500 Glycine max HOM05D007637 ORTHO05D009508 1.9e-12 76.3 121 39.7
HanXRQChr09g0262411 Helianthus annuus HOM05D007637 ORTHO05D009508 1.9e-12 76.3 125 36.8
Solyc04g007585.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 9.4e-12 73.9 123 39.8
MBI16_g21183_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 1.2e-11 73.6 60 58.3
Ciclev10017462m.g Citrus clementina HOM05D007637 ORTHO05D009508 2.7e-11 72.4 130 42.3
Phvul.007G035600 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 8.0e-11 70.9 119 35.3
Nitab4.5_0002644g0060 Nicotiana tabacum HOM05D007637 ORTHO05D009508 1.0e-10 70.5 98 45.9
HanXRQChr11g0325281 Helianthus annuus HOM05D007637 ORTHO05D009508 1.4e-10 70.1 123 37.4
Rhsim09G0068300 Rhododendron simsii HOM05D007637 ORTHO05D009508 2.3e-10 69.3 132 40.9
QL02p049171 Quercus lobata HOM05D007637 ORTHO05D009508 5.2e-10 68.2 51 58.8
Eucgr.G02214 Eucalyptus grandis HOM05D007637 ORTHO05D009508 8.8e-10 67.4 92 41.3
ECA232G5064 Erigeron canadensis HOM05D007637 ORTHO05D009508 3.7e-08 62.0 125 36.8
Nitab4.5_0002456g0100 Nicotiana tabacum HOM05D007637 ORTHO05D009508 3.1e-07 58.9 69 47.8
arahy.Tifrunner.gnm1.ann1.NE5PRN Arachis hypogaea HOM05D026189 ORTHO05D009508 7.0e-07 57.8 131 37.4
PGSC0003DMG400010395 Solanum tuberosum HOM05D007637 ORTHO05D009508 7.7e-06 54.3 129 36.4


User provided reference genes

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