Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv14836 Davidia involucrata HOM05D007500 ORTHO05D009197 5.3e-93 344.4 176 100.0
CSS0001813 Camellia sinensis var. sinensis HOM05D007500 ORTHO05D009197 7.0e-45 184.5 123 78.0
Haze_12411 Corylus avellana HOM05D007500 ORTHO05D009197 6.6e-43 177.9 133 69.2
CANSAT01G0539 Cannabis sativa HOM05D007500 ORTHO05D009197 8.6e-43 177.6 135 69.6
Cc11_g16840 Coffea canephora HOM05D007500 ORTHO05D009197 1.9e-42 176.4 132 71.2
QL03p052860 Quercus lobata HOM05D007500 ORTHO05D009197 1.9e-42 176.4 144 66.0
QL03p053117 Quercus lobata HOM05D007500 ORTHO05D009197 1.9e-42 176.4 144 66.0
QL93p2010_0098 Quercus lobata HOM05D007500 ORTHO05D009197 3.3e-42 175.6 144 66.0
arahy.Tifrunner.gnm1.ann1.Z93F9T Arachis hypogaea HOM05D007500 ORTHO05D009197 1.1e-40 170.6 133 64.7
Cfa009364 Carpinus fangiana HOM05D007500 ORTHO05D009197 8.9e-40 167.5 133 66.9
PGSC0003DMG400029106 Solanum tuberosum HOM05D007500 ORTHO05D009197 2.6e-39 166.0 136 66.9
Potri.001G055000 Populus trichocarpa HOM05D007500 ORTHO05D009197 3.4e-39 165.6 132 62.9
Solyc05g015330.1 Solanum lycopersicum HOM05D007500 ORTHO05D009197 3.4e-39 165.6 132 68.2
Sopen05g010600 Solanum pennellii HOM05D007500 ORTHO05D009197 5.8e-39 164.9 132 68.2
CiPaw.05G110500 Carya illinoinensis HOM05D007500 ORTHO05D009197 7.5e-39 164.5 133 66.2
Atru.chr11.2314 Acer truncatum HOM05D007500 ORTHO05D009197 1.3e-38 163.7 133 64.7
Duzib268G0307 Durio zibethinus HOM05D007500 ORTHO05D009197 1.3e-38 163.7 121 71.1
Sed0012176 Sechium edule HOM05D007500 ORTHO05D009197 1.7e-38 163.3 133 65.4
Nitab4.5_0001404g0040 Nicotiana tabacum HOM05D007500 ORTHO05D009197 2.2e-38 162.9 136 66.9
TWI18G0612 Tripterygium wilfordii HOM05D007500 ORTHO05D009197 2.2e-38 162.9 133 66.2
Ciclev10033679m.g Citrus clementina HOM05D007500 ORTHO05D009197 3.7e-38 162.2 133 65.4
CsaV3_6G032240 Cucumis sativus L. HOM05D007500 ORTHO05D009197 6.4e-38 161.4 133 65.4
Actinidia30653 Actinidia chinensis HOM05D007500 ORTHO05D009197 8.3e-38 161.0 120 70.8
MELO3C011458.2 Cucumis melo HOM05D007500 ORTHO05D009197 8.3e-38 161.0 131 67.2
Lsat_1_v5_gn_8_131281 Lactuca sativa HOM05D007500 ORTHO05D009197 8.3e-38 161.0 135 64.4
Nn5g28851 Nelumbo nucifera HOM05D007500 ORTHO05D009197 8.3e-38 161.0 135 66.7
Sabra01G0039500 Salix brachista HOM05D007500 ORTHO05D009197 8.3e-38 161.0 120 65.8
Cpa.g.sc43.48 Carica papaya HOM05D007500 ORTHO05D009197 1.4e-37 160.2 133 66.9
PGR102G0196 Punica granatum HOM05D007500 ORTHO05D009197 1.4e-37 160.2 135 64.4
COL.COLO4_20391 Corchorus olitorius HOM05D007500 ORTHO05D009197 1.9e-37 159.8 136 65.4
Gohir.A03G126600 Gossypium hirsutum HOM05D007500 ORTHO05D009197 2.4e-37 159.5 136 64.7
Peaxi162Scf00128g00124 Petunia axillaris HOM05D007500 ORTHO05D009197 2.4e-37 159.5 143 62.2
ClCG08G010070 Citrullus lanatus HOM05D007500 ORTHO05D009197 3.2e-37 159.1 131 66.4
Thecc.02G209700 Theobroma cacao HOM05D007500 ORTHO05D009197 7.1e-37 157.9 119 68.9
Gohir.D02G150000 Gossypium hirsutum HOM05D007500 ORTHO05D009197 6.0e-36 154.8 136 63.2
Gorai.005G168300 Gossypium raimondii HOM05D007500 ORTHO05D009197 6.0e-36 154.8 136 63.2
FAN17G2194 Fragaria x ananassa HOM05D007500 ORTHO05D009197 1.0e-35 154.1 142 59.9
Aqoxy6G00433 Aquilegia oxysepala HOM05D007500 ORTHO05D009197 1.7e-35 153.3 138 60.1
FAN22G1415 Fragaria x ananassa HOM05D007500 ORTHO05D009197 1.7e-35 153.3 147 58.5
Manes.12G012100 Manihot esculenta HOM05D007500 ORTHO05D009197 1.7e-35 153.3 135 60.7
MSTRG.7998 Avicennia marina HOM05D007500 ORTHO05D009197 2.3e-35 152.9 131 61.1
Nitab4.5_0000861g0040 Nicotiana tabacum HOM05D007500 ORTHO05D009197 3.0e-35 152.5 118 70.3
AUR62024115 Chenopodium quinoa HOM05D007500 ORTHO05D009197 3.9e-35 152.1 127 62.2
DCAR_031200 Daucus carota HOM05D007500 ORTHO05D009197 3.9e-35 152.1 128 64.1
BcaC06g31713 Brassica carinata HOM05D007500 ORTHO05D009197 6.6e-35 151.4 133 63.9
BcaC06g31714 Brassica carinata HOM05D007500 ORTHO05D009197 6.6e-35 151.4 133 63.9
Migut.K00728 Erythranthe guttata HOM05D007500 ORTHO05D009197 6.6e-35 151.4 143 57.3
FAN07G2442 Fragaria x ananassa HOM05D007500 ORTHO05D009197 8.6e-35 151.0 147 57.8
FAN12G0274 Fragaria x ananassa HOM05D007500 ORTHO05D009197 8.6e-35 151.0 117 64.1
C07p25790 Brassica napus HOM05D007500 ORTHO05D009197 1.1e-34 150.6 133 63.9
A06p47960 Brassica napus HOM05D007500 ORTHO05D009197 1.5e-34 150.2 133 63.2
BraA06t27666Z Brassica rapa HOM05D007500 ORTHO05D009197 1.5e-34 150.2 133 63.2
Ca_16464_v3 Cicer arietinum L. HOM05D007500 ORTHO05D009197 1.9e-34 149.8 134 63.4
Prupe.1G226700 Prunus persica HOM05D007500 ORTHO05D009197 1.9e-34 149.8 153 55.6
FvH4_4g23840 Fragaria vesca HOM05D007500 ORTHO05D009197 2.5e-34 149.4 117 63.2
Sc14g0009050 Simmondsia chinensis HOM05D007500 ORTHO05D009197 3.3e-34 149.1 133 63.9
Thhalv10003290m.g Eutrema salsugineum HOM05D007500 ORTHO05D009197 5.6e-34 148.3 121 66.1
MBI01_g29007_MAGBIO Magnolia biondii HOM05D007500 ORTHO05D009197 5.6e-34 148.3 131 60.3
THA.LOC104814194 Tarenaya hassleriana HOM05D007500 ORTHO05D009197 5.6e-34 148.3 132 61.4
AT5G43250 Arabidopsis thaliana HOM05D007500 ORTHO05D009197 9.5e-34 147.5 134 64.9
Sp2g08040 Schrenkiella parvula HOM05D007500 ORTHO05D009197 1.2e-33 147.1 121 66.1
BcaC06g34668 Brassica carinata HOM05D007500 ORTHO05D009197 1.6e-33 146.7 133 63.9
BolC7t43101H Brassica oleracea HOM05D007500 ORTHO05D009197 1.6e-33 146.7 133 63.9
CARHR180640 Cardamine hirsuta HOM05D007500 ORTHO05D009197 1.6e-33 146.7 123 64.2
Glyma.18G007100 Glycine max HOM05D007500 ORTHO05D009197 2.1e-33 146.4 132 62.9
EL10Ac6g13495 Beta vulgaris HOM05D007500 ORTHO05D009197 2.8e-33 146.0 132 61.4
AL8G17240 Arabidopsis lyrata HOM05D007500 ORTHO05D009197 3.6e-33 145.6 135 63.0
TAR381G0854 Trochodendron aralioides HOM05D007500 ORTHO05D009197 3.6e-33 145.6 135 60.7
Rhsim12G0026300 Rhododendron simsii HOM05D007500 ORTHO05D009197 8.1e-33 144.4 125 61.6
Carub.0008s0545 Capsella rubella HOM05D007500 ORTHO05D009197 1.4e-32 143.7 133 62.4
Glyma.11G250000 Glycine max HOM05D007500 ORTHO05D009197 1.4e-32 143.7 132 60.6
Aa31LG9G13320 Aethionema arabicum HOM05D007500 ORTHO05D009197 2.4e-32 142.9 133 60.2
SGA_v2.0_scaffold9G04716 Striga asiatica HOM05D007500 ORTHO05D009197 4.0e-32 142.1 141 56.7
CAN.G43.17 Capsicum annuum HOM05D007500 ORTHO05D009197 6.8e-32 141.4 105 74.3
Phvul.001G261300 Phaseolus vulgaris HOM05D007500 ORTHO05D009197 1.2e-31 140.6 134 60.4
HanXRQChr09g0258281 Helianthus annuus HOM05D007500 ORTHO05D009197 1.5e-31 140.2 134 57.5
VMungo1383G3421 Vigna mungo HOM05D007500 ORTHO05D009197 1.5e-31 140.2 135 60.7
PSO541G0382 Papaver somniferum HOM05D007500 ORTHO05D009197 2.0e-31 139.8 114 63.2
AUR62005615 Chenopodium quinoa HOM05D007500 ORTHO05D009197 3.4e-31 139.0 126 61.9
Ah.03g136190 Amaranthus hybridus HOM05D007500 ORTHO05D009197 9.9e-31 137.5 132 56.1
Lalb_Chr08g0230661 Lupinus albus HOM05D007500 ORTHO05D009197 9.9e-31 137.5 133 56.4
RcHm_v2.0_Chr4g0430411 Rosa chinensis HOM05D007500 ORTHO05D009197 1.3e-30 137.1 106 66.0
Psat5g095440 Pisum sativum HOM05D007500 ORTHO05D009197 1.7e-30 136.7 134 59.0
SalBow2G0500 Salvia bowleyana HOM05D007500 ORTHO05D009197 3.8e-30 135.6 106 65.1
Medtr3g085430 Medicago truncatula HOM05D007500 ORTHO05D009197 8.4e-30 134.4 138 56.5
Lj6g0001546 Lotus japonicus HOM05D007500 ORTHO05D009197 5.4e-29 131.7 140 54.3
ECA233G2547 Erigeron canadensis HOM05D007500 ORTHO05D009197 1.6e-28 130.2 105 61.9
MD16G1118400 Malus domestica HOM05D007500 ORTHO05D009197 2.1e-28 129.8 121 56.2
MD13G1118300 Malus domestica HOM05D007500 ORTHO05D009197 1.7e-27 126.7 121 55.4
TPR.G28279 Trifolium pratense HOM05D007500 ORTHO05D009197 1.7e-27 126.7 118 60.2
unitig_26.g10395 Utricularia gibba HOM05D007500 ORTHO05D009197 8.7e-27 124.4 135 53.3
PSO675G4883 Papaver somniferum HOM05D007500 ORTHO05D009197 1.1e-26 124.0 104 61.5
ATR1120G099 Amborella trichopoda HOM05D007500 ORTHO05D009197 1.2e-25 120.6 116 59.5
CDE06G2379 Ceratophyllum demersum HOM05D007500 ORTHO05D009197 1.2e-25 120.6 146 46.6
HPP92_002864 Vanilla planifolia HOM05D007500 ORTHO05D009197 4.2e-21 105.5 113 52.2
Zm00001eb122050 Zea mays HOM05D007500 ORTHO05D009197 4.3e-18 95.5 134 42.5
Os01g0183400 Oryza sativa ssp. japonica HOM05D007500 ORTHO05D009197 5.6e-18 95.1 120 44.2
CAN.G1248.23 Capsicum annuum HOM05D000764 ORTHO05D009197 7.1e-13 78.2 50 82.0
SEGI_35529 Sequoiadendron giganteum HOM05D007500 ORTHO05D009197 2.8e-09 66.2 88 35.2
Pp3c13_23370 Physcomitrium patens HOM05D020496 ORTHO05D009197 5.8e-07 58.5 66 47.0
Pp3c13_23373 Physcomitrium patens HOM05D020496 ORTHO05D009197 5.8e-07 58.5 66 47.0
HPP92_002807 Vanilla planifolia HOM05D007500 ORTHO05D009197 1.3e-06 57.4 77 46.8


User provided reference genes

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